Xiphophorus maculatus (southern platyfish): 102224300
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Entry
102224300 CDS
T02923
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102224300 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102224300 (nup160)
03036 Chromosome and associated proteins [BR:
xma03036
]
102224300 (nup160)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102224300 (nup160)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102224300 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
102224300
NCBI-ProteinID:
XP_023182879
Ensembl:
ENSXMAG00000016320
UniProt:
M4API3
LinkDB
All DBs
Position
2:complement(20057914..20073178)
Genome browser
AA seq
1396 aa
AA seq
DB search
MAAVLERSLVEICGFGREAERRFREVTVSPGVSAPPGGLKFADSAGAFHYNESGKLLSVT
SNRFIHWWTSGDTVQLVEESLDTNLLNNGVRLKFTYCSVLAGGVTVHETLNNIIILICTN
HTVHRLVLPHPARMYRSELVTERHMQSVFTDVMKLDLQDPAHCAVIPGWAGHTAIPGAVT
AWLSFPGDAHFALAAPAGGITVVTLPPHNSQGSVSVVELKRSSMMRRISGWMPTAIRGEQ
SPADLVLNLAVREEEDDSLIFALCQDHRLRMWSLTEQTCLLEADMLEYMPACKGVRRLSG
QGHRLRLAFSSRTGLCLCVHLAVPQRGQFIVLQLVATDNNRYSLEHISSLFSTQETLVDF
ALTPTDVWALWVDESNSAVVKYINFEHNTAGQWNQVFVQPPPEEEVLIGVDLDPRETYLE
HLFSPLRFTATAIVRALQIFRRGSDKVLDPSWENLKKEVTQAVESELQSSVTEFEFSQEE
YRQLQVEFWSRFYSCCLQYQEVESTPLGLTVSHHTGMACLLRKGFVSFLLPCFAVDHLYL
SLDPYLLSEEDTPISDDPDAARDILQLVRTLRLVSDAVSAEMAYEMEKALEYLQTPEKAA
ELVLENMVCNDKDGVIEDIQNKLQDIRSPIAAMVALLRELDLETDSELGGDGPVAPGLNV
RMSLSQLYGSSCAVSVICQGVCHMAMTRAQFCRDLLILQKLYLHFGDNVFLGGGNQLLQL
QQDLIPRTSHLLSSYHLLKHVSQSLASSVPMDTIDVNLQHLTALELSDTPSISTGRSVLN
PQTVLELFYQTAARRIIVSQIFSQQHPDSPLLWTHMTSTVVQLLAQLLWPSNPGFQFPEC
LMANCQFTQLQEFVRLVGPWCQVNIGSCRFMLAQCHLANGEGQKALRCFQEAATEVEREE
FLMKLTGSEDEEAAASPRLQYYNKVLRLLEDVGLPELVIQLASLAIAEADDDVHCQAALW
TRIFKHHLDLGHNSEAYEALTQNPDSSMQLDCLRQLVVVLCERSQLQDLVQFPYMNLHDE
VVGIIESRARGLDLLTHNYYELLYAFHITRHNYRKAGTVMFEFGMRLGREVRTRLGLQKQ
VNCYLAALNCLRLIRPEYAWIVQPVSGSTYERPGASPKRNSDGEFPAEPAAGRRQVDILE
LHDLEKEYFLSRARLTLAQHHPPSAAIAGSASAVELVLLLVQTGLFDSALSLSRIFKLDL
SPIFDALAFKCIQLQSGGEEPQSEAWSWLAANQLSVVNTKESSATDEAWRLLASYLDRYP
STNGQHHRHVIHKLLSHGVPLPDWLLQSYKCVDAPSLLRLLLNFDLLESAAELVLEYVDA
VLGRGHQYFGIERPLSATSPPAWLPYTAIDQLLHALSETQTHGNLHIKVRDKLDEYHNMV
QQTTEHRLASQRRVAA
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttttggagcgcagtctcgtggagatctgcgggttcgggcgggaagcggaa
cggcgattcagagaggtcacagtgagtccaggtgtaagcgctcctccgggcgggttaaag
tttgcagacagcgccggtgcattccattacaatgagagtggcaagctgctgtctgtcacc
agcaaccgcttcatccactggtggacgtcaggggacacagtgcaactggtggaggagtct
ctggacaccaacctgctgaataatggtgtcagactgaagttcacctactgcagtgtcctg
gctggtggagtcaccgtccacgagaccctaaacaacatcatcatcctcatctgcaccaat
catactgtccacagactggttcttcctcatccggcgcgcatgtaccgcagcgagctggtt
acagagcgccacatgcaatctgtcttcaccgatgtgatgaagcttgaccttcaggacccg
gcccactgcgccgtaattcccggctgggcggggcacacggcgattcctggcgctgtgacg
gcatggctcagttttcccggagacgctcactttgctctggctgcgcctgcaggaggcatc
acagtggtgacgctgccacctcacaattcgcagggcagcgtgtcggtggtggagctgaag
aggagctccatgatgaggaggatctccggctggatgcccaccgccatccggggcgagcag
agtccggctgacctggtcctgaatctggcggtccgggaggaggaggacgattcgctgatc
ttcgctctgtgtcaggatcaccggctgcgcatgtggtcgctcacggagcagacatgcctc
ttagaggccgacatgttggagtacatgccggcctgtaaaggcgtgaggcggctgtcgggt
caaggtcaccgtctgaggctcgccttctcatccagaaccgggctgtgtctgtgcgtgcat
ctggccgtcccgcagagaggacaattcatcgtcctgcagcttgtcgccacggacaacaac
cgctacagcctggaacacatctcttctctgttcagcacgcaggaaactctggtggacttc
gccctgaccccgaccgacgtgtgggctctgtgggtggacgagtccaactctgccgtggtc
aagtacatcaacttcgaacacaacacagcaggtcagtggaaccaggtgtttgttcagcca
ccaccagaagaagaagtcttaataggagtagacctggaccccagggagacctacctggag
catctcttctctccgctgcgtttcactgcgacagccatcgtcagagccttgcagatcttt
cgtcgtggctctgataaggtcttggatccatcctgggagaatctgaagaaggaggtgacc
caggccgtggagagcgagctgcagagcagcgtcacagagttcgagttttctcaggaggag
taccgccagctgcaggtggagttctggtcccggttctactcttgttgtctgcagtaccag
gaggtggagtccactccgctgggtctgacggtcagccaccacaccgggatggcctgtctg
ctccgtaagggcttcgtctcgttcctgctgccgtgtttcgctgtggatcacctgtacctg
tccctcgatccatacctgctgtctgaggaggacacgcccatcagcgacgatcccgacgcg
gcccgagacatcctgcagctggtccggactctgcggctcgtcagcgacgccgtttctgca
gagatggcatacgagatggagaaagctctggagtacctccagactcctgagaaagctgcc
gagctggtcctggaaaacatggtgtgcaatgacaaagatggcgtgatcgaagacatccag
aacaaacttcaggatatccggagtcccatagcagccatggtggctctgctaagggagctg
gacctggagacggactctgagctgggcggagacgggcctgtcgctccaggtctgaacgtc
aggatgagcctgtctcagctctacggcagcagctgcgccgtctccgtcatctgtcagggc
gtctgccacatggccatgacccgagcgcagttctgcagagacctgctcatactgcagaag
ctttacctgcacttcggagacaacgtgtttctgggcggtggaaaccaattgctgcagctc
cagcaggatctgatcccgcggacctcccacctcctctcctcctaccaccttctcaaacac
gtcagtcagagcctcgcctcctccgttcccatggacaccatagatgtgaacctgcagcac
ctcacagcgctggagctgtcggacactccgagcatatcgacgggtcgatcagtgctgaac
cctcagacggtcctggagctcttctaccagactgcagccagaaggatcatcgtctcccag
atattttcccagcagcaccccgactctccgctcctctggactcacatgacctccactgtg
gtccagctgctggctcagcttctctggcccagtaaccctggcttccagttcccagagtgt
ctgatggccaactgtcagtttactcagctgcaggagttcgtgcgtctggttggcccttgg
tgtcaggtgaacatcggctcttgccgcttcatgctggctcagtgtcacctggccaacgga
gagggccagaaggctctgcggtgtttccaggaggcggcgacagaggtggagagggaggag
tttctaatgaagctgacaggcagcgaggacgaggaggcggcggccagtccgaggctgcag
tactacaacaaggtgctgcggctgctggaggacgtgggtcttcctgagctcgtcatccag
ctcgcctccctggccatagcagaagcagacgatgacgtccactgtcaggcggcgctgtgg
acgagaatcttcaaacatcacctggatttgggacacaacagtgaagcttatgaagctctg
acccagaaccccgacagcagcatgcagctggattgtctccgtcagctggtcgtggtgctc
tgcgaacgctcgcagctgcaggacctggtccagtttccctacatgaacctgcatgatgag
gtggtcggcatcattgagtctcgtgctcgcggtctggatctgctgacacacaattactac
gagcttctgtacgccttccacatcacccgacacaactacaggaaagcggggacagtcatg
tttgagtttgggatgcgtctcggccgggaggttcgaactcgactcggtctgcagaaacag
gtgaactgctacctcgctgcgctcaactgtctgcgcctcatcaggcccgaatacgcctgg
atcgtccaaccggtgtccgggagcacatacgagcgacccggagcgtctccgaagaggaac
tcagatggagagtttccagcagagccagctgcaggtaggcgacaggtggacatcctggag
ctccatgacctggagaaggagtacttcctgtcccgagctcgcctcactctggctcagcac
cacccgccatcagcagccatcgcaggcagcgcgtctgcagtcgagctggttctgctcctg
gtccaaactggactcttcgactctgctctgtcgctcagtcgcatcttcaaactggatctg
agtccaatcttcgacgccctggccttcaaatgcatccagctgcagtccgggggggaggag
cctcagagtgaagcttggagctggttggctgctaaccagctctctgtcgttaacactaaa
gagtccagtgccacagacgaggcctggcggctgctggcctcctacctggacaggtatccc
tccaccaacgggcagcatcaccgccacgtcatccacaagctgctgtcacatggtgtgccg
ctgcctgattggctactgcaatcctacaagtgtgtggacgctccctcactgctgcgtctc
ctgctgaactttgacctcttagaatcagccgcggagctcgtgttggagtacgtggacgcc
gtcctcggccgtggacatcagtactttgggattgagaggccgctgtcagccacgtcgccg
cccgcctggctaccgtacactgccatcgatcagcttctgcacgccttgagcgagacacaa
acacacggcaaccttcacatcaaagttcgagacaaactggacgagtatcacaacatggtg
caacagacgacggaacaccgactcgcctctcagagacgagtggcagcatga
DBGET
integrated database retrieval system
