Xiphophorus maculatus (southern platyfish): 102224438
Help
Entry
102224438 CDS
T02923
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102224438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xma02000
]
102224438
Transporters [BR:
xma02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102224438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
102224438
NCBI-ProteinID:
XP_005808839
Ensembl:
ENSXMAG00000012320
UniProt:
M4AD75
LinkDB
All DBs
Position
11:6568236..6575957
Genome browser
AA seq
613 aa
AA seq
DB search
MKTSRMKSSAALCVSSGQTQKSKEVEERGRWGTKAEFILTVMGAIIGPGNIWRFPYLCYK
NGGGVFFIPYTVFIFTCGIPLFFLETALGQYTSQGGITCWRTICPLFQGIGYASHLVIAF
SATSYIIILAWAFFYLFSSFSSDLPWASCGNYWNSDSCFDNRLNLSLESRLNTTLPVVEF
WQHRVLKISGGIEEVGGLRWELALCLILSWIICYFCVWKGIKSTGKAAYFTATFPYVMLF
ILLIRGVTLPGALDGIIYYLYPDISRLSDPQVWMDAGTQIFFSYAIGLGFLTSLGSYNSF
NNNCYRDCFYLCLLNSATSVVAGFAIFSVLGFMTYEQGLDVSEVATSGPGLAFIVFPRAV
AMMPMPQVWSVCFFLMIILLGLDSQFVGIECVMTSLVDHFPSYLHQGYRRELLLLVMSCI
FCMLGFLLVTEGGIYLLQLLDHHVCSGSTLLILSFCQSVSIGWVYGADRFYDNIKEMIGY
HPFPFMKYCWQYITPLVCFGTFIFSIIKYTPLKFSNSYVYPLWANVLGWFFATVSLSLIP
LFVLFKLIKGQGTLRQRFLSLCKPVASLNQIRSTSTPDSDSRAPYTELRPLTQSAGLTQS
EPTNCSAERLTVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgagcaggatgaaaagcagcgcagcgctttgcgtatcaagtggacaaactcag
aagtctaaagaagtggaggaacggggccgctgggggaccaaggcggagttcatcctcacc
gtgatgggggcaattatcggccctgggaatatttggaggttcccatatctctgctacaag
aacggagggggtgtgtttttcatcccatacaccgtgttcatatttacgtgtggaataccc
ttgttctttcttgaaactgcgttagggcagtacaccagccaggggggaatcacttgctgg
cggacgatttgtccgctttttcaaggcattggttatgccagtcaccttgtcatcgcattc
agcgccacttcatacatcataattcttgcttgggcgtttttttacctgttctcctccttc
agctcagacctgccatgggcttcatgtgggaattactggaactcagactcatgcttcgat
aaccgtctgaatctgagcctggaatcacgactgaacactacgctcccagttgtagagttc
tggcaacatcgagttttaaagatctctggtgggatcgaggaggtgggtgggctgaggtgg
gaactggcgctgtgcctcatcctgagctggatcatctgctacttctgtgtctggaaagga
atcaagtcaacaggaaaggcagcgtacttcacagccaccttcccttatgtcatgctgttt
attctgctgatacgaggcgtgaccctcccaggagctctggatgggatcatttattatctc
taccctgatatctctcgcctctcagatccccaggtctggatggacgctggtactcagatc
ttcttctcctatgcaatcggccttggtttcctcacttctcttgggagttataactccttc
aacaataactgttacagggactgtttctacttgtgtctgctgaacagcgccaccagcgtt
gtggctggctttgccattttctccgttttgggcttcatgacgtatgaacaaggcctggac
gtttctgaagtagcaacatcaggccctgggttggcattcattgtgtttccgcgcgctgtg
gccatgatgccgatgcctcaggtgtggtccgtgtgtttcttcctcatgatcattctgctt
ggactagacagccagtttgttgggatagagtgtgtgatgacgtctctggtcgatcatttc
ccttcttacctgcatcaaggctacaggcgggagctgcttctgcttgttatgtcctgcatc
ttctgcatgcttggattcttacttgtcactgagggtgggatttacctgctgcagctgttg
gaccaccatgtctgcagcggctccaccctgctgatcctctcgttctgccagtctgtcagc
attgggtgggtctatggtgcagaccgtttctacgataacatcaaggagatgattggctat
catccatttcctttcatgaagtactgctggcagtacatcactcctctggtttgctttgga
accttcatcttctcgattatcaaatatactccactcaagttcagtaactcctacgtttat
ccgctatgggcaaatgtcctgggatggttttttgccacagtttctctttcactcatccca
ctgtttgtacttttcaaattaatcaaaggccaaggcacactccgacagcgtttcctatcg
ctctgcaaacccgtcgcttccttgaaccaaatacgcagcacttccacaccggacagtgac
agcagagctccgtacacagagctcagacctctgacccagtcggccggactcactcagtca
gaaccaacaaactgctccgctgagaggctgaccgtctactag
DBGET
integrated database retrieval system
