Xiphophorus maculatus (southern platyfish): 102224440
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Entry
102224440 CDS
T02923
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04145
Phagosome
xma04210
Apoptosis
xma04517
IgSF CAM signaling
xma04530
Tight junction
xma04540
Gap junction
xma04814
Motor proteins
xma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102224440
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102224440
09143 Cell growth and death
04210 Apoptosis
102224440
09144 Cellular community - eukaryotes
04530 Tight junction
102224440
04540 Gap junction
102224440
09142 Cell motility
04814 Motor proteins
102224440
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102224440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102224440
03036 Chromosome and associated proteins [BR:
xma03036
]
102224440
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102224440
04147 Exosome [BR:
xma04147
]
102224440
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102224440
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
102224440
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
102224440
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102224440
Exosomal proteins of other body fluids (saliva and urine)
102224440
Exosomal proteins of colorectal cancer cells
102224440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
102224440
NCBI-ProteinID:
XP_005809818
Ensembl:
ENSXMAG00000003930
LinkDB
All DBs
Position
8:1527915..1531418
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccatccacgtcggccaggccggagtccagatcgggaatgcctgc
tgggagctgtactgcctggagcacggcatccagccggacggacagatgcccagcgataag
accatcggcgggggagacgactccttcaacaccttcttcagtgagaccggcgccgggaag
cacgtccccagggccgtgttcgtggacctggagcccaccgtcatcgatgaggttcggacc
gggacgtaccgccagctgttccaccccgagcagctcatcactgggaaggaagacgctgcc
aacaactacgcccgcggccactacaccatcggcaaggagatcatcgacccggttctggac
cgcatccgtaaactggctgaccagtgcaccggcctgcagggcttcctggtcttccactcg
ttcggcggaggaaccggctccggcttcacctccctgctgatggagcgcctctcggtggat
tatgggaagaagtccaagctggagttctccatctacccggcgccgcaggtctccacggcg
gtggtggagccgtacaactccatcctcaccacccacaccaccctggagcactcggactgc
gccttcatggtggacaacgaggccatctacgacatctgccgccgcaacctggacatcgag
cgccccacctacaccaacctgaaccgcctcatcagccagatcgtgtcgtccatcacggcg
tcgctacgcttcgacggcgcactcaacgtggacctgacggagttccagaccaacctggtg
ccctacccgcgcatccacttccccctggccacctacgcacccgtcatctcggccgagaag
gcctaccacgagcagctgacggtggccgagatcaccaacgcctgcttcgagcccgccaac
cagatggtgaagtgcgacccgcgtcacggcaaatacatggcctgctgcctgctgtaccgc
ggtgacgtggtgcccaaggacgtcaacgccgccatcgccaccatcaagaccaagcgctcc
atccagttcgtggactggtgccccaccggcttcaaggtgggcatcaactaccagccgccc
accgtggtgccgggcggagacctggccaaggtgcagcgcgccgtctgcatgctcagcaac
accacggccatcgccgaggcctgggcgcgcctcgaccacaagttcgacctgatgtacgcc
aagcgggccttcgtccactggtacgtgggcgagggcatggaggagggcgagttctctgag
gcgcgggaggacatggccgccctggagaaggactacgaggaggtgggcgtcgactcggtg
gagggcgaggacgaggagggggaggagtactag
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