Xiphophorus maculatus (southern platyfish): 102224547
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Entry
102224547 CDS
T02923
Symbol
lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102224547 (lrrc49)
04812 Cytoskeleton proteins [BR:
xma04812
]
102224547 (lrrc49)
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
102224547 (lrrc49)
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
102224547 (lrrc49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
102224547
NCBI-ProteinID:
XP_023188703
Ensembl:
ENSXMAG00000016602
LinkDB
All DBs
Position
4:complement(9549561..9582622)
Genome browser
AA seq
793 aa
AA seq
DB search
MESDLTDGKTRRGGRKHHNIVSDKCLLLTPMINSCKLHLMTAKTLLARNLQTMSDSQDSN
KQTNISTTQTAGDSNPESELHSNNKTSDNSVQHLVRLSGAAPVSHCPNEARGRLSRMPHS
AEITCHHMCLKHLKPVGSQGFNYRASSGFTCTQITSAASFQRIDLDRRCLEEFPKVGFIE
ELRLLNLQHNLITRIPHLLHLQQLTVLNLHDNHISDMNGIENLSSLRVLTLGKNRIHKIC
CLERLYKLSILDLHDNQIRKIENISHLSELQVLNLSCNRISSVENLQGLSSLTELNLQYN
CISVVTEVDRLAGLQRLFLSCNNIHSFDQLACLGESQSISELTLDGNPVALETWYKQAVL
RCVLHLKQLDMKRITDEDRRMAGVLTRKEEEKKKESHKQTIHKEKRRLAIRNAAQQWEGV
KACLELPPTNGSKEDASPENSPAHSPAQTNGLAQETSPEEPRRISPGSGPERPSGGTENR
LRTNSRPNSPRDPKLVETGSGNVQSLSLSDSHLAELDGDTLRLFGLGALEALERGWGVQT
AGAVTVITFRFINYDAIVPTLPRIRVKFPNLSHLIFLETNISRLPQLAALAQVRRLDQLT
IHPEGNPVVGLALWRSFIIYRLYHFNLQKINGQEVTMNDVIAAERVFGTLGHIAATETPR
CRLLLLLEESRKRQLQFLLEGRGRRAGLSPEELRDNGKLLGEGLSRALFNYPSRDCNAES
PEEGTLESSERAAVIEQYLQELVKRASDTNLKGEALHKLWPSMFAEMVRDCVLEMRDRGA
FRQASLAKLTETK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggacctgactgacgggaaaactagacgcggtggtagaaaacaccacaacatc
gtcagcgacaaatgcctactacttactcctatgatcaacagctgcaagttgcaccttatg
acagccaaaacactgttagcgagaaacctgcaaacgatgtctgattctcaagattccaat
aaacaaacaaacatcagtaccacacaaacagctggtgattctaacccagaaagtgagtta
cattccaacaataaaaccagtgacaactctgtccagcatttagtacggctatctggtgct
gctccagtttctcattgtccaaatgaagctagaggcagattaagtagaatgcctcacagt
gcagagatcacttgccatcacatgtgcctaaagcatctcaagccagtaggttctcaaggg
tttaattacagagcttcttcgggtttcacctgcacccagataacttctgctgccagtttt
caacgcatagacctggacaggcgttgtctggaggaattccctaaagtgggttttattgaa
gaactccgacttctcaacctgcagcacaatctaattaccaggattccgcatttgttgcat
ctgcagcagctcaccgtcttgaacttgcatgataatcacatctctgatatgaatggtatt
gaaaatctcagctctctccgggttctgacgctgggaaagaacagaattcataaaatttgc
tgcttggaacgcttatacaaactgagtatcctggatttgcatgacaatcagatcaggaag
atagagaatatatctcacctgagtgaactccaagttctgaacctgtcctgtaatcgcatc
tcaagtgtggagaatttgcagggcctcagctcgttgactgaactcaacctgcagtacaat
tgcatctctgtggtgactgaggtggaccgcctggccggcttgcagcgtctctttctcagc
tgcaacaacatccacagttttgatcagctagcctgccttggagagtcacagtccatttct
gagctcaccctggatgggaatcctgtagccctggagacatggtacaagcaggccgtcctg
cgctgtgtgcttcacctgaaacagctggacatgaagcgcatcacagacgaggatcggcgc
atggcaggtgtattgactcgaaaagaggaagaaaagaaaaaggagagtcacaagcagaca
attcataaggagaagcgtcgtctagcgatccgtaatgcggcccagcagtgggagggtgtc
aaagcctgcttggagctgcctccaacaaacggctctaaggaggacgctagtccagagaac
agtcctgctcacagccccgcgcagaccaatggccttgcacaggagacgtctccagaggaa
ccaagacggataagtccaggttcaggaccagaacgaccatcaggcggaacagaaaacaga
ctccgcaccaacagccgacctaacagccctcgagatccaaaacttgtggagacagggagt
ggcaacgttcagagcttgtccttgtctgacagtcatctggcggagcttgatggagacacc
ctgcgtttatttggacttggagccctggaggccctggagagaggctggggtgttcagact
gctggtgctgtcaccgtcatcaccttccgcttcattaactatgatgccatcgttcccaca
cttcctaggataagagtcaagttcccaaatctgtcgcacctgatatttctggaaaccaac
atcagccgtctcccccagctcgctgctctggctcaggtgaggcgtctggaccaactgacc
attcatccagaaggaaacccagtggtcggtctggctttgtggcgctcattcatcatctat
cgtctctaccacttcaaccttcaaaaaatcaatggccaggaggtgaccatgaatgatgta
attgctgcagagcgtgtatttgggacactgggtcacatagcagccaccgaaaccccacgt
tgccggctcctattgctgctagaagagtccaggaaaaggcagctgcagttcttgttggag
ggacgtggtcggcgggcggggctgagtccagaggagcttcgggataatgggaagctcctg
ggtgaaggcctgagcagagcgctctttaactatccaagcagagactgtaatgcagagagc
cctgaggagggcactttggagtcatcagagcgtgccgccgtgatagaacaataccttcag
gagttggtcaaaagggcgtcagacaccaatctgaagggtgaggctttacacaagctctgg
ccatccatgtttgcagagatggtgagagactgcgtgttggagatgagagacagaggggcc
ttccgccaagccagtcttgcaaagctcactgagaccaagtga
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