Xiphophorus maculatus (southern platyfish): 102224576
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Entry
102224576 CDS
T02923
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102224576
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Major cadherins
102224576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Stevor
Fibulin_C
RET_CLD1
TM_ErbB1
CLSTN_C
DUF443
Motif
Other DBs
NCBI-GeneID:
102224576
NCBI-ProteinID:
XP_023182335
Ensembl:
ENSXMAG00000014306
UniProt:
M4AIN7
LinkDB
All DBs
Position
21:3087948..3276326
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AA seq
803 aa
AA seq
DB search
MLTRNCLLLFLWILVNEGSGFSSHKPSSPLGRSRSGRERARSSVGSTRNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDKGDSSVKYTLSGDGAGSIFTIDQTTGDIHALR
SLDREEKPYYTLRAQAVDIDTNIPLEPESEFVIKVQDINDNEPKFLEGPYTASVPEMSPV
GTYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIKTALPNMDREVKEEYQV
LIQAKDMGGQLGGLAGTTIVNITLSDVNDNPPRFSKSFFHLRVPESSAMGSAVGRIKAHD
LDIGRNAEVEYTIVPGDGGAMFDITTNEHNQEGMIILKRPLDYETKKAYTFKVEASNAHL
DPRFQSFGAFKDTATVKINVLDVDEPPVFNKPSYVMDVYEDTPAGTIIGAVTAQDLDASS
SPVRYSIDWKSDLDSYFDIDPVEGTISTNELLDRENIAQHNISVVATKLNSPVMTSRVAV
TVHVLDINEFPPELASPYETFVCENSKVGQVIQIFSAKDQDLPSAGQQFSFRTSKEDVKN
KNFTVRDFGNNTAGIVTKRSGFRRRLQEIYFLPVVIEDNGYPPKSSTGTLTIRVCGCELD
GSLLTCSAEAIFLPVGLSTGALIAILLCIVILLVIVVLYVGLRRQKKKETLMSSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLYRRDIKPEMQRGPKPPASQDSSDIRDF
INQRLKEHDTDNSAPPYDSLATYAYEGNGSVAESLSSIESLAVDFEEDYDYLSDWGPHFK
TLAGIFGEQSETHSDSTNTENTH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgcctgctgctgttcctgtggattcttgtcaacgagggttctggc
ttttcctcacacaaaccttcatccccactgggacggagcaggagcgggcgagagcgcgcc
aggagctcggtgggctcgacgaggaatggggcggctgggtttcagcgcgtcaagaggggc
tgggtgtggaaccagttctttgtcctggaggagtacatgggctcagacccgcagtacgtg
ggcaagctccacaccgacctcgataagggggacagttcggtgaagtacaccctctcgggg
gacggtgctggctccattttcacaattgaccaaactacgggggacatccatgccttaagg
agccttgacagggaggagaagccttactataccctgcgggctcaggctgtggacatcgac
accaacatccctctggagccggaatcagagtttgtcatcaaggtccaagatatcaatgac
aatgaaccaaaattcctggagggaccttatacagccagcgtacccgagatgtcaccagtc
gggacctacgtgacgcaagtaacagccacagacgcggatgacccaacctatggaaacagt
gcccgagttgtatacagcatccttcatggtcagccatacttctctgttgaccccaaaaca
ggtgttataaagacagctttgcccaatatggacagagaagtgaaggaagagtaccaggta
ttaatccaggccaaggacatgggcgggcaactgggaggactggctgggaccaccattgtc
aacattacgctcagcgacgttaacgataacccacccaggttctctaaaagtttcttccac
ctgagagttcctgaatcctctgcaatggggtccgctgtcggcagaataaaggcccacgac
ttggacatcgggaggaacgctgaagtagagtacaccatcgttcccggcgatggaggcgcc
atgtttgacatcacaaccaatgagcacaaccaagaggggatgatcattctcaaaaggccg
ttggactatgagaccaagaaggcgtacaccttcaaggtggaagcctccaacgctcatttg
gatccacgattccagagctttggggctttcaaagacacagcaacagtgaagattaacgtg
ttggatgtggatgagcccccggtgttcaataagccctcctatgtgatggatgtgtacgag
gacacgcccgcgggcactatcatcggggcggtgacggcacaggatttagacgccagcagc
agcccagtcaggtattccatcgactggaagagtgacttggacagctactttgacatcgat
ccggtggaaggtacgatttccacaaacgagctgcttgacagggagaacatcgcccagcac
aatatctctgttgtggcaaccaaactcaacagcccggttatgaccagccgagtggccgtc
acggtgcacgtcctggacatcaacgagtttccgcctgaactggccagtccgtatgagacc
ttcgtatgtgaaaactccaaagtgggacaggtgattcaaatcttcagtgcaaaagatcaa
gacctaccaagtgctgggcaacagttctccttcagaacgtcaaaggaagacgtcaagaat
aagaatttcacagttagagacttcggaaacaacacggcaggaattgtgacaaagcggagc
ggcttcaggcggcgtctacaagagatctacttcctgcctgttgtgatagaagacaatggc
tacccgccgaagagcagcacggggacgctaaccattcgtgtgtgtggctgcgaattggac
ggctcgctgcttacatgcagcgccgaggccatctttcttcctgtggggctgagcacagga
gctctcatcgccatacttctgtgcatcgtcatcttattagttatcgtcgtactctacgtg
ggattaagacgccagaagaaaaaggaaaccctcatgtcctccaaagaggacatccgagat
aatgtgatccattacgacgacgaaggaggaggggaagaggacacgcacgcctttgacatg
gggacccttcgaaaccccaaagtcgtcaaggagaacctgtaccgaagggacatcaagccc
gagatgcagcgaggccccaagccgcccgcctctcaggacagctcagacatccgagacttc
atcaaccagcggctgaaagagcacgacacggacaactcggctccgccctatgactctttg
gccacgtacgcctacgaggggaacggctcggtggcagagtctctcagctccatcgagtcg
ctcgcagtagacttcgaggaggactatgactacctcagcgactgggggcctcactttaaa
actctggcggggatctttggagagcaatcagaaactcattcagattcgacaaacacagag
aacacgcactga
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