Xiphophorus maculatus (southern platyfish): 102224614
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Entry
102224614 CDS
T02923
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102224614 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xma01007
]
102224614 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102224614 (vars2)
Enzymes [BR:
xma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
102224614 (vars2)
Amino acid related enzymes [BR:
xma01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102224614 (vars2)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102224614 (vars2)
Prokaryotic type
102224614 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Motif
Other DBs
NCBI-GeneID:
102224614
NCBI-ProteinID:
XP_023200806
Ensembl:
ENSXMAG00000013523
UniProt:
M4AGG2
LinkDB
All DBs
Position
13:25147515..25181046
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AA seq
1080 aa
AA seq
DB search
MWTKGHCPKARLVAKTATKLWSSKPPEPSRPVPSAQPRPQVQKRRRRQEREKTILSAQHN
KVGDQTLNWSEKQKIAYTAQTPPGTKKDTSLPFPSSYSPDYVESCWYQWWEKEGFFNPDQ
HERLSHRVDQTFSLCIPPPNVTGTLHLGHALTVAVQDALVRWRRMQGHRVLWVPGCDHAG
IATQTVVERRLLREKGKRRQDFSREEFLQEVWKWKNEKGEEIYHQLRRLGASLDWSRACF
TMDPGFSRAVTEAFVRLCDSGLIYRSEGLVNWSCALQSAISDIEVETKDVSGPTLMSVPG
YENKVEFGTMFTFAYPVEGIDGEVAVSTTRPETMLGDVAVAVHPDDPRYQTFHGLRCKHP
FTNRLIPIITDTMVDMDMGTGAVKVTPAHDFMDFHLSQKHSLPRPSVIRGDGTMEPLCGQ
WLEGVKRFDARQLVVNGLVEKNLFRGKKNHAMTLPICSRSGDIIEPLLKKQWFVRCDTMA
MKAIEAVEDGQLEIIPHSYTKTWKNWLSSISDWCISRQLWWGHQIPAYQVQLPNSTTKEE
ELWVWGKSEEEARQRAAVKYGVNPEHITLRQDPDVLDTWFSSALFPFTMLGWPEKTPDLQ
RFYPNSVLETGSDLIFFWVARMVMLGSELTGQLPFKQVLFHSLVRDKYGRKMSKSLGNVI
DPLDVIHGVTLKRLQEKVKEGNLDPREQLVAMKAQSKDYPNGIPQCGTDALRFALCSHKM
QGEDISLSISEVLGFRHFCNKMWQTLRFTLEVVGDNITPVGTLEGTTPLNSMERWICSRL
YSTIVQCEQAFEAYELHIVTSALYSFWVHNLCDVYMEYVKPVLLKQNEGVEVLTDKDHSS
NTTQVASTVLYHCVSLSLALLSPFMPFITEELWQRLQPFRPGAMAQTSLCLQPYPRSTQL
AHWYFPEEEKDFLLVQNVIRVARSLRAQCGLTKEKPVMWAVCSPSQAQTLLRFGSAVWTL
SRILSLQIYSPDQDGHLPSVHSTPPPTGCLVAVVDHTCQLHLHIQSGVHIEQQILHLSQR
KDKLLPKMEESLCKLQSSNNQTKTPAHIRQRMESKVSVLKQELKTIEDQIKVLQEKQSMG
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtggactaaaggtcattgtccaaaggcgaggctggtagcgaagacagccaccaaactg
tggtccagcaagcctccagaaccttctcgccctgtcccttctgctcagccgcggccacaa
gtccaaaaacgcagacgcaggcaagaacgggaaaagactattctgtcagctcaacataat
aaagttggagatcaaacattaaactggagtgaaaaacagaaaatagcttacacggctcaa
acacctcctgggacaaagaaagataccagcttgcctttcccatcttcatacagtccagat
tatgtggagtcctgctggtatcagtggtgggagaaagagggatttttcaatcctgaccaa
catgagagattgtctcatcgtgtggatcagacgttttctttatgtattcctccgccaaat
gtgaccggtactcttcatctgggccatgctctaactgtagctgtacaagacgctctggtt
cgatggagaaggatgcagggtcacagagttctgtgggtgcctggatgtgaccatgcagga
atcgcaactcagacagtggtggagagaagacttctgagggaaaaagggaagcgcagacaa
gatttttctagagaagaatttttacaggaagtctggaaatggaaaaatgagaaaggagaa
gagatttatcaccagctgaggaggcttggtgcttctctggactggagcagagcctgtttc
actatggatccaggttttagcagagctgtaactgaggcttttgtcagactgtgtgattct
ggtcttatttaccgctcagagggtttggtcaactggagctgtgctcttcagtctgcaatc
tctgacatagaggtggagaccaaggatgtgtctgggccaaccttaatgtctgtccctgga
tatgagaataaggtggaatttggaacaatgttcacctttgcatatcctgtcgaaggcatt
gatggtgaagtggcagtgtccacgactcgtcctgagacgatgcttggagatgtggctgta
gctgttcaccctgatgatcctcgatatcagactttccatggactaaggtgtaaacatcct
ttcaccaacagactcatccccatcatcacagatacaatggtggacatggatatgggaaca
ggtgctgtgaaggtgactcctgctcatgactttatggacttccatctgtcacagaagcat
tctctgccccgcccttcggttattagaggagatggaactatggagccattgtgtggacag
tggttggagggtgtgaagcggtttgatgccaggcagctggttgtgaatggtcttgttgaa
aaaaaccttttcagaggaaagaagaatcacgccatgactttacccatctgcagtcgctca
ggagacatcattgaaccacttctaaaaaagcagtggtttgtccgttgtgatacaatggct
atgaaagctatagaggctgtagaggatggccaattagaaatcattcctcactcctacacc
aagacgtggaagaactggctgtccagcatcagtgactggtgcatatccaggcaactttgg
tggggtcatcagatccctgcttaccaagtacagcttcccaattcaacaactaaagaagag
gagctttgggtttgggggaagagtgaagaggaggcccgacaaagagctgccgtaaaatat
ggagtgaacccagaacacatcactttgcgacaggacccagatgttctagatacgtggttc
tcctcagccctgtttcctttcaccatgcttggctggccagaaaagacccctgacctccag
cgcttctaccccaactctgttctggagactggcagtgacctcatcttcttttgggttgct
aggatggtgatgttgggatctgaactgactggacaactaccatttaaacaggttctgttt
cactccttagtacgagataaatatggcaggaagatgagtaaatctcttggaaatgtcatt
gacccattagatgtaatacatggagtcactctcaagagacttcaggagaaagtgaaggaa
ggaaacctagatccaagggagcaactagttgctatgaaagcacagagtaaagactatcct
aatggaataccccagtgtgggacagatgctctgagatttgccctttgctcccacaagatg
cagggtgaagatattagtttgtccatatctgaagttcttggcttcagacacttctgtaat
aaaatgtggcagactctgagattcacattggaagttgttggtgataacataacacctgtg
ggaacacttgaagggacaactcctctgaacagcatggagcggtggatctgttccagactc
tacagcacaattgtacaatgtgagcaggcgtttgaagcttatgagctgcatattgtcaca
tctgctctctactccttctgggtgcacaacctgtgtgatgtttacatggaatatgtaaag
ccagtgctgctgaagcagaatgagggagttgaggtcctgacagacaaagaccacagcagc
aacacgacgcaggtggccagcactgttctctatcactgtgtgtctttgtctcttgctctg
ctctctcccttcatgcccttcatcaccgaagagttgtggcagagactgcaaccattcaga
ccaggagctatggcccaaaccagcttgtgtttgcaaccctacccccgatccactcagctg
gctcactggtattttccggaggaggaaaaagatttcctgctggttcagaatgttatccga
gtagcacgttctctgcgagcccagtgtggcctaactaaagaaaaacctgtcatgtgggca
gtgtgttcaccaagccaggcccagacacttcttcgctttggctcagctgtttggacttta
agtcgaatcttaagcctccagatctacagtccagatcaagatggtcaccttccctccgtc
cactccactcctcctcctacgggatgcctcgttgctgtggtggatcacacatgtcagcta
cacctccacatccaaagtggagttcacattgagcaacagatcctgcatctctctcagcga
aaagataagcttcttccgaagatggaagaaagtctttgcaaacttcagtcttccaacaat
caaaccaagactccggcacatatcaggcaaaggatggaaagtaaggtttcagttttgaag
caggaattaaagaccattgaagatcagataaaagttctacaggagaaacagtcgatggga
taa
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integrated database retrieval system
