Xiphophorus maculatus (southern platyfish): 102224686
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Entry
102224686 CDS
T02923
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03022
Basal transcription factors
xma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102224686 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
102224686 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102224686 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102224686 (gtf2h1)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102224686 (gtf2h1)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102224686 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
102224686
NCBI-ProteinID:
XP_005807017
Ensembl:
ENSXMAG00000003986
UniProt:
M3ZP65
LinkDB
All DBs
Position
2:7443445..7452019
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYSDIRCQKISPDGK
AKIQLQLVLHTGDSTTFHFANESTALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWANRLGGMNNGEPAPYNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTGSQ
DIFSECAKQDEKGLKSLVIQGVKNPLVDLLSLEDKTLDEGYGISKALPSTSNANKSVKES
SNSAIIKRFNHHSAMVLAAGSRKGDVTTDLASETSSTDGNSRDSDFFQPPLKKVKLQEAI
EYEDLQRENTPKTVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVGFIQQEMANYKPNL
TRVLSSTTATSAIAALSPGGVLMQSVGQQSINQMVPNDIQGELKHLYIAAGELLRHFWSC
FPVNTPFLEEKVTKMKTNLERFQLTKLRPFQEKIQRQYLSTNLTGHLEDMFQSAYSKFHI
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctgtcagaggaggttctgctggtggtgaagaaagtccgtcagaggaagcag
gatggcacactctacctgatggctgaaagaatagcctggggtccagaaggcaaagaccgc
ttcactgtcagccacctgtattcagacatccgctgtcagaagatcagtcctgatggtaaa
gccaagattcagctccaactggtccttcacaccggagatagtaccacattccactttgcc
aatgagagcaccgcacttaaagacagagatgctgccaaggagctgctgcagcagctactg
ccaaagttcaagaagaaggccaacaaggagctggaggagaaaaacaggatgcttcaggaa
gatccggtgcttttccaactgtacaaagatcttgtggtgagtcaagtgatcagtgctgat
gaattttgggccaaccggttaggaggcatgaataatggggaacctgcaccttacaacaac
aaacaggaagttggaatatctggagcatttctggcggacatcagaccacagactgatggc
tgcaatggcttgagatataatttgactgcggacattatcgagtccatatttagaacatac
cctgcagtgaagcagaagtatagtgaaaatgtgcctcataacctgacggagaaggagttc
tggacgcgcttttttcagtctcattatttccacagagaccgcatcaacacaggttctcag
gatattttctcagaatgtgccaagcaagatgagaaagggttaaaatctctggtgatccaa
ggagtgaagaatccattggttgaccttttgtcattggaggataaaacattagacgagggt
tatgggataagcaaagccctaccttcaacctcaaatgcaaacaagtcagtgaaagagagt
agtaactctgccattataaagcgattcaaccatcacagcgctatggtgctggcagcaggc
tcacgcaagggagatgtgaccaccgacctagccagtgagactagcagcacagacggcaac
tccagagattctgatttctttcagcctccactgaagaaggttaaactacaagaagccata
gaatatgaggatctgcaaagggaaaatactcctaagacagtggcgttaaatctgaagaag
tctgacaggtatgctcatggtcctgttccacttcagtcccagcagtatacaaccagccaa
gacatcatcaactctgttggcttcatccagcaggagatggccaattacaaacccaaccta
actcgggtgttgtccagcaccacagcaacctctgccatcgcagcgctctctccaggaggc
gtccttatgcaatctgttggacagcaatccataaaccaaatggtgcccaatgacatccaa
ggagagctgaagcacctttacattgctgcaggggagttattgagacacttttggtcctgt
tttcctgtaaacacaccatttttggaggaaaaggtgacaaaaatgaagacaaacttggaa
agatttcaattgaccaagcttcgtccttttcaggagaaaatccaacgtcagtacttgagt
acaaatcttacagggcacctggaggacatgtttcagtcggcctatagcaagtttcatatt
tggcaaacccgcaggatgatgaggaaaacctga
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