Xiphophorus maculatus (southern platyfish): 102224729
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Entry
102224729 CDS
T02923
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein-like isoform X2
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102224729
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102224729
Cilium and associated proteins [BR:
xma03037
]
Other cilia and associated proteins
Stereociliary proteins
102224729
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
102224729
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
T2SSN
Motif
Other DBs
NCBI-GeneID:
102224729
NCBI-ProteinID:
XP_005798440
Ensembl:
ENSXMAG00000009750
UniProt:
M4A5M1
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All DBs
Position
19:complement(16832186..16843021)
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AA seq
701 aa
AA seq
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MSRQIFILLLLWASRVTETTTDAWRQCTELLPLDLLSFVLERDTSRVVPGARVKQSAGAR
GVQFLSPDASMSFPASQLLVNCDLFPKEFSIVITVKVNRFAPKRDEYVFSLMGRSNVEAV
ALEEKEDEQRLREKETKSDEKHAGVILGLKLSQNSLHFVFNGHRKAAEHWSFQGIRLTPN
QWHTLVLVIGLHHRKLTVDCNPPLESGPSRAFPSDLNIQASRFHIGSRGRWKGLFSGLMR
QLVLVPNSDASNQLCPSSDPRLAALSVPPLLLDLPVRRRQNERHDTSSGAAGRLSVGVER
PCSELLRGQLWFNPLKKGLYVCDGSMWITVLEDHKRLDYVLEQQVLTTSSETHDVEVFQI
QGIGLMAAMAHRSSASGSAVYLWTNLGFRLYQNISTHGALSWKHFQVGKKAYLVVSNSGT
ETNKSVDKQPESDFSVIYKWSNRRKRFVQFQTLQTYCARDWEAFNINEQTYLAVANHRMG
NNNHTINSVIYKWSRSTKSFEVHQTLITSGAYDWEFFKVGPYHFLVVANAFDGMTTSLDS
VIYVWIDGKFQVFQTIKTFCATDWEMFQIGSRVFLVVANGHRFQGNGPSQYTINSTIYEL
DMSGRMFVRFQDIVTYSAVDWEFFSLGEEYFLVVANSYNGESYSLNSILYRWQGYEGFVP
VHWLPTFGCSDWEFFSSNGESFLIYSSAKAPLSKVFKLKTY
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcagatattcatactgctcctcctctgggcttccagggtcacagagacaacg
acagacgcatggagacagtgcacagagttgcttcccttggatcttctgtcttttgttctg
gagagggacacctccagagtggtccccggggcgcgcgtgaagcagtcagctggagcgagg
ggcgtccagtttctcagccccgatgcgtctatgagcttccccgcttcccagctcttggtg
aactgtgaccttttccccaaagagttttccattgttatcacagtgaaagtgaatcgcttt
gcacccaagcgagacgagtacgtcttctctctgatgggacgaagtaacgtggaggctgtc
gcactggaggagaaagaagacgagcagcgcctgagggagaaggaaactaagagtgatgag
aaacatgcaggggtcatccttggactaaagttatcccaaaacagcctgcattttgttttc
aacggccatcggaaagcagcagagcactggagctttcaaggcatccgtctaactcccaac
cagtggcacacactggttttagtcatcggccttcaccacaggaagctgacggtggactgt
aacccgccgctggaaagtggtccctccagggctttcccttcagatcttaacatccaggca
tccagattccacattggcagtcggggaagatggaagggcttgttttcaggtctgatgcga
caactggttcttgtgccgaactcagacgcctccaatcaactctgcccgtcttctgacccc
cggcttgcagctttgtcagttccaccgctgctcttagacctgcctgtcaggaggaggcag
aatgagagacatgacacttcctctggagccgcaggacgactgtcagtgggcgtggagagg
ccatgttctgagttgctgcgaggtcagctgtggtttaatcctctcaaaaagggcctctat
gtctgtgacgggtcaatgtggatcactgtgttggaggaccataaaagactggactacgtt
ttggaacagcaggttcttaccaccagctctgagacacacgatgtagaggtgtttcagata
caaggcattggcctcatggctgctatggcccacagatcctcagcctctggttctgctgtg
tacctctggaccaacttgggtttccggctctaccagaacatcagcactcacggcgctctg
tcttggaagcatttccaagtaggaaagaaggcatatctggtagtgtctaattctgggact
gaaacaaacaagtctgttgacaaacagcctgaatctgacttttctgtcatttataaatgg
agcaacagaagaaaacggtttgtgcagttccagactctgcagacctactgcgctcgagac
tgggaggctttcaacattaatgaacagacatatcttgctgtggccaatcacagaatggga
aacaacaatcacaccatcaacagcgtgatctacaagtggagcagatcgacaaagtctttt
gaggttcaccagacactgatcacatcgggggcctacgactgggagttcttcaaagttgga
ccgtaccacttcctggtggttgcaaatgctttcgatggcatgaccacttctctggactcg
gtcatctacgtttggatcgatggaaaatttcaagtgttccagacaatcaagacattctgc
gccacagactgggaaatgttccagattggcagcagagtatttctggttgtggccaacgga
cacagattccagggtaacggacccagccagtacaccatcaactcaactatctatgagctg
gacatgagtgggaggatgtttgttcgcttccaggatattgttacctacagtgcagtggat
tgggagttcttcagcctcggggaagaatatttcttggttgttgctaactcttataatggg
gagtcctactctctcaacagcattctttacaggtggcagggatatgaaggatttgttccc
gttcattggctcccaacctttgggtgcagtgactgggagtttttcagctctaatggagaa
tcctttctgatctactccagtgccaaagcgcctctctccaaagttttcaagctcaaaacc
tactag
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