Xiphophorus maculatus (southern platyfish): 102224736
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Entry
102224736 CDS
T02923
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102224736 (mindy4)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102224736 (mindy4)
Ubiquitin system [BR:
xma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
102224736 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
FOP_dimer
CAF20
Motif
Other DBs
NCBI-GeneID:
102224736
NCBI-ProteinID:
XP_014324815
Ensembl:
ENSXMAG00000018424
UniProt:
M4AVG5
LinkDB
All DBs
Position
9:14088645..14096770
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AA seq
690 aa
AA seq
DB search
MVPSVEEISSSLVREYLSRKGLKRTIACMDEEHPRTPASINNRSLLKQMLNIEDLYRQNK
TQKSPVKTLLEIIVKHHIERLHHENITTGDSQQVVPNTGSTSDYCAGSPSMINETKADEI
TPAICSSKHSELSSEVKEICSIPVTDLTMISKKDGPTSLNPNDFLIDNTDYQESQQPMPS
KKENYTQKEKESKCLIAGVTSKTKTSRIRRGMVAGPVAQESNRKRHSQRVEVSQPLFIRD
QESRETQDGLEMTAKNTSSCEEQNLESIDLKEENQEEKDFRSKGQRTVNTIKVQMKPDAH
ELNLAEMVLDDIDDSGGLPEVSLRSAVSKFKFPGRPMDHRNTMELKTILLGSSLSCFSTE
WKNQGFTFSDTHDLGYGIVQRKGGPCGVLASIQAFFLKKLLFENTDGGDVILQRLRPSSS
TRRHCLVLALAEVLWRAGEEKQAVVAINSGRSHFTTFGHYRSEELFEKMTCFSVDNIKDL
QVILEQHIEQYEMGMFGCVLLVISAVLSRSIEKVREDMDLHTTPLIGAHGYCTQELVNLL
LCGRAVSNVFDNDIELDSGNGNMTLLKGIKDQCQVGLLSLFEHYNICKVGAYLKSPSYPI
WVVCSESHFSVLFGLQRELLTNQDEDLEFDLYYYDGLANQQEEIRLTVSLGKLAQKHHQV
DADLIPPLELCIRTRWKDASVNWNETEPIL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggtcccttcggttgaagaaatttcttcgtctttagtgcgggaatatctgagcaggaag
ggcctgaaaaggaccattgcttgtatggatgaggaacatccacgcacgcctgccagtatc
aataaccgatcactgctgaagcagatgcttaacattgaagatctctacagacaaaataag
actcagaaatcgcctgtgaaaacattgttggaaatcatcgtgaagcatcacattgaacgg
ttacaccatgaaaatatcaccacaggagactctcaacaggtggtcccaaatacaggctca
acatctgattactgtgcaggatcgccatcaatgataaatgaaacaaaagcagatgaaatt
acaccagcgatttgttctagcaaacacagtgaactgagttctgaagtgaaagaaatatgc
agcattccggtgacagacttaacaatgatttcaaagaaagatggacccacttccttgaat
ccaaatgatttcttaattgacaacacagattaccaagaaagccagcaaccaatgccttcg
aaaaaggagaactacacccaaaaagagaaagaaagtaaatgtttgattgctggggtcacc
tcaaaaaccaaaactagccgcatcaggcgaggtatggtggccggaccagtagctcaggaa
tctaacagaaaaaggcatagtcaaagggtcgaagtttctcaaccattgttcatcagggat
caggaaagcagggagactcaggatggacttgagatgactgccaaaaacacatccagctgc
gaagaacaaaatctagagtctattgatttaaaagaagaaaaccaggaagaaaaggacttc
agaagtaaaggacaaagaacagtaaacacaataaaagtacagatgaaaccagatgcccat
gagctgaacctggctgagatggttttagatgacattgatgactctggtggtctgcctgaa
gtgtctcttcgtagcgctgtttcaaagtttaaatttccaggccgtccaatggaccatcgc
aacaccatggaattgaaaacaattcttctgggttccagcttaagttgttttagcactgag
tggaagaatcagggttttaccttttctgacacacatgacctcggatacgggattgtgcag
agaaagggtggtccttgtggagtcctggcatcaattcaagcattttttctgaagaagctt
ctgtttgaaaacactgatggcggagatgttatccttcaacgactaagaccttccagcagc
accagaagacactgtcttgttttggctctggctgaagttttgtggagagccggggaggaa
aaacaagctgtagttgcaataaattcaggaagaagccatttcaccacatttggacactac
agatctgaggaattgtttgaaaagatgacgtgtttctctgtggataacatcaaagatctg
caggtcattctagagcagcatattgagcagtatgaaatggggatgttcggatgcgtcctg
ctggtcatctcagctgttctttctcgatccattgaaaaagtgagagaggatatggatctg
catacaaccccactgataggagctcatggctactgcactcaggagttggtgaatctgttg
ctctgtggcagagctgtttctaacgtctttgacaatgatatagagctggactcaggaaat
ggcaacatgactttgcttaagggaattaaggaccaatgccaagtcggcctgctgtccttg
tttgaacattataatatctgtaaggtgggggcttacctgaagtctccttcttaccccatc
tgggtggtgtgcagtgaaagtcacttcagtgtgctgtttggcctgcagagggagctattg
acaaatcaagatgaagacctggagtttgatctgtattattatgatggattggccaatcag
caggaggaaatccgcctcactgtttctctcggcaaattggcacagaaacaccaccaagtt
gatgctgatctaattcctccacttgagctctgcatcaggacacggtggaaagatgcatca
gtcaactggaatgagaccgaaccaattctctga
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