Xiphophorus maculatus (southern platyfish): 102224912
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Entry
102224912 CDS
T02923
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
xma03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102224912 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102224912 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102224912 (nup153)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102224912 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
102224912
NCBI-ProteinID:
XP_023200657
Ensembl:
ENSXMAG00000003437
LinkDB
All DBs
Position
13:complement(159926..180165)
Genome browser
AA seq
1501 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQQSGLISRVTDTVRSIVPSWLQKYFKNGDTPAGQT
GQGTEQNCQPTPPPAPPNGNEEGPPPIDGRDSPEPSTSNTEPSTSRASLNFQEYVLSRPP
LSRSHLHFTPLDASSPTMGASSSLFSPPSTSSAPGPFSTGFSLVKEIKDNLSQHEDDNIS
TTSGFSSRASDKDVPTSKTASLPQLWSPEMDRTNSGPQQSQSSLKKPSFNLSVFGNSSNS
TLNSTLLNSSQLGDSPFYPGKTTYGGAAAVRSSRGRPGTPYQAPVRRQIKAKPAGAQPCG
VTSATARRILQSLERMSSPLADAKRIPAATAGSPSRSPSMDILNQDGPRHQAKKKRMDSN
LPPVQKLVVPAAASVSGNRSVSFRPTLTPGGLTRALDRTPREKTPTRQSPQLPEATPGPS
QSTRSFSDPVYPLSSTPAASSLSSGGGKIRRERTTARPSSKHTEEDEVAEAPVLPSISLP
INKSSLPTFSFSPSLPPAISVSSSPSFTSTTPAKETLANKDPPKASTPPCAPFTFSSPIV
KATAASPPSYSPAVGFTFSAPVAKLAPSMSNGNLTAPTATAVKPIASKSTEEFVGPFKPA
KTLKQGSVLDLLKSPGFASPVVQNSPGTNTASQQTPTQPRTTPSPGTSFSSSLPSPSGFG
GLPGASAGWSCDVCLVQNKQSEIKCVCCQAPKPNSSPKSAESKKTPAHSAGLQSSSTSTA
SASTTTGFGPIFSKPAGTWECDTCLVSNKSDAVKCVACETAKPGTGLKPSLTFPPNFSAA
KTASTPSDPVSTGISGFGDKFKKPEGAWECETCLVQNKAEDTKCVACTASKPGASAAVSS
AASSAPTFALLEQFKKPEGSWECDTCMVQNKAADVKCVACQTTKPGATVEPKAFGSFGSS
AAGASGTSTFGSSTSNPGGFKFGTSDSTAGSGSFKFGTTDSSLSSSSGEFKFGASFGSSS
SESSSKDTAASSGFKFGGSSEGFKFGAASNEDKKSDQPAAGAGLKFGSSSEVAFGNGSSS
TERNSSSKSGFTFGLTKSADKTPETTTTSSSSITLTPLTSSRGNSDKAGSSNDTTSTNTT
TATAKGSVFGRLGDPNVASGTPQVSSTFGSLQAGKEPAAPTFAFGKPEEKKEAAPSTFVF
GAVKKEPEAAAAPSGGGFSFSKPSAPADQPPPAFTFGKQAEKSETSTSEASKPSFSFGQT
AADSTAAPKPAFSFLANNPPSATTSSSATPTPAMFGAASSGPTPAPDATSSSSSSAPSTF
VFGQPSSTTGDAPPAKNFMFGQNHDNQSAAPSSAPLNPAPAPAQPFIFGASANAASAPAP
AAPSFTFGAPAAAPPAASSSAPSAAPSPFVFSSPPSGGFGANQNPPFASGFGSPFPATPT
QTFGTKPNAAPTFGQQNNATPVFGSSTNSAPSGGFQFGGASAFGASNNSSGVFTFGAGAG
APSAPSANPPIAPQSGAAGGSFNFTQTPAFNIGSAKTFTASPAGQSGIAGRKIKTAVRRR
K
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgggtggagggaaaatcagaagcaggagatatcacatcgcttctaaacct
tacgccaagagtaaacagcagtcaggcctcatcagtcgagtgacggacacagtgaggagc
atcgttccttcctggctgcagaaatacttcaagaatggagacactcctgcaggacagaca
ggacaaggaacagagcagaactgccaaccaacacctcctcctgctcctcctaatggtaat
gaagagggacctcctcccattgatggacgcgactccccagagccaagcaccagtaataca
gaaccctcgaccagccgagcatccctgaactttcaggagtatgtgctttctcgaccacct
ctgagtcgttctcacctccattttaccccgctggatgcttcctcccctacaatgggggcc
tccagcagcctcttctctccgccctccacttcttcagcccctggccccttctccacaggc
ttctcattggtcaaagaaattaaggacaacctctcgcaacacgaagacgataacatctcc
accacgagtgggttctcctcccgtgcatctgacaaggatgtcccaacttcaaaaaccgca
tcacttcctcagctttggtctccagagatggacaggacaaactctggacctcagcagtct
cagtccagtctcaaaaagccttctttcaacctgtctgtgtttggaaactcctccaattca
acgttaaacagcacactgctgaactctagccagcttggagattcacctttctaccctggg
aaaaccacgtatggaggagcagctgcagtcaggagctcccgcggtcgtcctggcactcca
tatcaggcgccggtgagaagacagatcaaggccaagcctgccggcgctcagccctgcggc
gtgaccagcgccaccgccaggcgcatcctgcagtctttagagcgcatgtcgagcccactg
gctgatgcaaagagaatcccagcagccacagcaggctcgcccagtcgttctccatcgatg
gacatcttaaaccaagatggtccccgtcaccaggcgaagaagaaacggatggactcaaac
ctccctccagtgcagaaactcgtggttccagctgcagcttctgtttcaggaaatcgatcc
gtgtctttcaggccgactttgacgcctggaggactcacccgagccctggacaggacgcca
agggaaaagacgcccacaagacaatcaccacaactacctgaagcaaccccaggtccatct
caaagcacaaggagtttcagtgacccggtctaccctctgtccagcacccctgcagccagc
agcctgagctccggagggggcaagatcaggagagaaaggaccacagcacggccttcctcc
aaacacactgaagaagatgaggtggccgaagcaccggtccttccaagcatttcactacca
atcaacaaatcatctttgcctacgttcagcttctctccatctttaccacctgccatctct
gttagctcctcccctagcttcacatccactactcctgcgaaggagacactcgcaaacaag
gatccaccaaaggcctccacaccaccctgtgcacctttcacattttcctctcctattgtc
aaggcaactgcagccagcccaccttcttactcccctgctgttggcttcaccttcagtgca
cctgtagcaaagctggctccctccatgtcaaacggaaacctgacagcacccacagcaaca
gctgtgaaacctatagcaagcaagagcacagaggaatttgtaggacctttcaaaccggcc
aagaccttgaagcagggcagcgtactagatcttcttaagtcacctggttttgcttctcct
gttgttcaaaattcccctggcaccaacaccgcttcccagcagacacccacccaacccaga
accactccttcacctggcacaagcttctcctcttcgctaccttcgccatcagggtttggt
ggtttgcccggtgcctcggcgggctggagctgtgacgtgtgtttggttcagaacaagcaa
tcggaaataaagtgcgtttgctgtcaggccccaaagccgaactcctcaccaaaatcagcg
gagagcaaaaaaactcctgcccattcagcagggctacagagcagtagcacaagcaccgcc
tccgcctccacaacaacaggatttggcccgatcttctccaaacctgcaggaacctgggag
tgtgacacgtgtctggtctcgaacaaatctgacgcagtgaagtgcgtggcctgtgaaacg
gccaaacccgggacgggactcaaaccgtcgctcactttcccccccaacttctcagctgct
aagactgcatctacaccctcagacccagtttccactgggatcagtgggtttggagataag
ttcaaaaaaccagagggtgcgtgggaatgtgaaacatgtttggtacaaaacaaggccgag
gacacaaagtgtgtggcctgcacggcttctaaaccaggagcttcggcagccgtcagttca
gcagccagcagtgccccaacatttgctcttttagagcagttcaagaaaccagaaggatca
tgggaatgtgacacctgcatggttcagaacaaagctgctgatgttaaatgtgttgcttgt
cagacaaccaaaccaggagctacagtggaacccaaagcctttgggtcttttggctcctca
gctgctggagcttctgggacctccacttttggctcttctacctctaatcctgggggtttt
aagttcggcacgtcggacagcacagccggatctggcagtttcaagtttggaactacagac
tcatcgttatcttcatcgtcaggtgaattcaaatttggagcctcgttcggaagctcctcc
tcggagtcgtcctctaaagacactgctgcgtcttcagggtttaaattcggtggatcctct
gagggcttcaaattcggagcggcgtccaacgaagacaagaagtcggaccagccggcggcg
ggtgctgggttgaagtttggaagcagcagcgaagtagcttttggaaatgggtcatccagc
acagaacgtaactcttcttctaaaagtggcttcacatttggactgacaaaatcggcagat
aaaacgccagaaaccaccaccacgtcttcatcctctattaccttgactcctcttacttct
tcacgaggaaatagtgacaaagcaggatcatcaaatgacaccacatcaactaacaccacc
acagccaccgctaaggggtctgtttttgggagactaggcgatccaaatgtggcatccggc
acaccacaggtgagctctacatttggatctttacaggcagggaaggagccggcggctcca
acgtttgccttcggaaagccagaggagaagaaggaggcggctccgtcgaccttcgtcttt
ggtgctgtgaaaaaggaaccagaggctgctgctgctccctcgggaggcggcttctccttc
agcaagccgagtgcgccagcagatcagccgccgccggctttcacatttggcaaacaggca
gaaaagagtgaaacgtcgacttcagaagcctcaaagccgtctttcagctttggacaaact
gctgcagattccactgctgctccaaaaccagccttttctttcctggctaataacccaccc
agcgccaccacctcgtcatccgccaccccgactcccgccatgtttggcgccgccagcagc
ggccccacaccagcaccggacgcaacttcgtcttcatcctcctcagctcccagcacgttt
gtgttcggccagccttcctccaccaccggtgacgctccgcctgctaagaacttcatgttt
ggacagaatcatgacaaccagtcagcggcgccgtcgagtgctccgctgaacccggctccg
gcgccggctcagccctttatctttggcgcttctgccaacgctgcttctgctcccgctcct
gctgctccctcttttacctttggagccccagcagcagcgccccctgctgcttcctcatca
gctccatctgcagccccgtcaccgtttgtgttcagttcacctccttcaggaggttttggt
gccaaccagaatcctcctttcgcatcaggttttggatcccccttcccagccacccctacc
caaacctttggaaccaaacccaacgctgcccccacgtttggacagcagaacaacgccaca
cctgtgtttggttccagcaccaactctgcacctagtggaggctttcagttcggaggagcc
agtgcttttggagcctcaaataactcttcaggcgtgtttacgtttggagctggagctgga
gcgccttctgccccctccgccaatccccccatcgcaccccagtcaggagcagctggtggc
agtttcaacttcacacaaactccagcatttaacatagggtcagctaagacattcaccgcc
tccccagctggacagtcagggatcgctgggcgcaagatcaaaaccgcggtgcgccgcaga
aagtag
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integrated database retrieval system
