KEGG   Xiphophorus maculatus (southern platyfish): 102225012
Entry
102225012         CDS       T02923                                 
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    102225012
   03041 Spliceosome [BR:xma03041]
    102225012
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     102225012
Spliceosome [BR:xma03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    102225012
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_Nup35 Calcipressin Nup35_RRM_2 RRM_3 DUF4523
Other DBs
NCBI-GeneID: 102225012
NCBI-ProteinID: XP_005802189
Ensembl: ENSXMAG00000004543
UniProt: A0A3B5PSL5
LinkDB
Position
11:complement(2882270..2894936)
AA seq 386 aa
MDDEQPRTLYVGNLSRDVTEPLILQVFQQIGPCKSCKMINDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKA
TYENNSKHLSFDDVMSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGY
SFVRFNSHESAAHAIVSVNGSSIEGHMVKCYWGKETPDMMNSMQQVSMPQQNKIGFAAAQ
PYNQWGQWYGNGPQISQYVPNGWQVPTYGVYGQAWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGATGYPTH
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggacgacgaacaacctagaaccctgtatgtaggaaatctgtccagggatgtcaccgag
cccctcattctacaagtcttccaacagataggaccttgtaagagctgtaaaatgatcaat
gatacggctggaaatgatccatactgctttgtggagttctatgatcacaggcatgctgct
gcctcattggcggccatgaatggaaggaaaatattgggtaaggaggtcaaagtcaactgg
gccacaacaccatccagccagaaaaaagacacaagtaatcactttcatgtcttcgtcgga
gacctcagtccagaaataacaacagaagacgtcaaagctgccttcgccccttttggcagg
atatcggatgctcgcgtcgtgaaagatatggctacagggaaatctaaaggctacggcttt
gtgtctttcttcaataaatgggatgcagagaatgccatccagcacatggggggtcagtgg
ttagggggcagacagatacggaccaactgggccacaagaaagccccctgctcccaaggcc
acctatgagaataactccaagcacctatcctttgatgacgtcatgagccagtccagcccc
agtaactgcaccgtatattgtggtggggtcagcacaggactcacagagcaactgatgaga
cagaccttctccccattcggacagatcatggaagtcagagtttttccagataaaggctat
tcatttgtgaggtttaactcccacgaatcagcggcccatgccatcgtctccgtcaatggt
tcttcaatcgagggccacatggtgaagtgctactggggtaaagagacgccagacatgatg
aactccatgcagcaggtgtccatgccccagcagaacaagattggcttcgccgcagcccag
ccctacaaccagtggggccagtggtacggcaacgggccccagatcagccagtacgtcccc
aacgggtggcaggtccccacctatggcgtctacggccaggcctggaaccagcagggcttt
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggta
atggagcccacacagggattgaatgggagtatgctagccaaccagcccggtatgggagcc
acaggataccccacgcactga

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