Xiphophorus maculatus (southern platyfish): 102225012
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Entry
102225012 CDS
T02923
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102225012
03041 Spliceosome [BR:
xma03041
]
102225012
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102225012
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102225012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
102225012
NCBI-ProteinID:
XP_005802189
Ensembl:
ENSXMAG00000004543
UniProt:
A0A3B5PSL5
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Position
11:complement(2882270..2894936)
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AA seq
386 aa
AA seq
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MDDEQPRTLYVGNLSRDVTEPLILQVFQQIGPCKSCKMINDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKA
TYENNSKHLSFDDVMSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGY
SFVRFNSHESAAHAIVSVNGSSIEGHMVKCYWGKETPDMMNSMQQVSMPQQNKIGFAAAQ
PYNQWGQWYGNGPQISQYVPNGWQVPTYGVYGQAWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGATGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaacaacctagaaccctgtatgtaggaaatctgtccagggatgtcaccgag
cccctcattctacaagtcttccaacagataggaccttgtaagagctgtaaaatgatcaat
gatacggctggaaatgatccatactgctttgtggagttctatgatcacaggcatgctgct
gcctcattggcggccatgaatggaaggaaaatattgggtaaggaggtcaaagtcaactgg
gccacaacaccatccagccagaaaaaagacacaagtaatcactttcatgtcttcgtcgga
gacctcagtccagaaataacaacagaagacgtcaaagctgccttcgccccttttggcagg
atatcggatgctcgcgtcgtgaaagatatggctacagggaaatctaaaggctacggcttt
gtgtctttcttcaataaatgggatgcagagaatgccatccagcacatggggggtcagtgg
ttagggggcagacagatacggaccaactgggccacaagaaagccccctgctcccaaggcc
acctatgagaataactccaagcacctatcctttgatgacgtcatgagccagtccagcccc
agtaactgcaccgtatattgtggtggggtcagcacaggactcacagagcaactgatgaga
cagaccttctccccattcggacagatcatggaagtcagagtttttccagataaaggctat
tcatttgtgaggtttaactcccacgaatcagcggcccatgccatcgtctccgtcaatggt
tcttcaatcgagggccacatggtgaagtgctactggggtaaagagacgccagacatgatg
aactccatgcagcaggtgtccatgccccagcagaacaagattggcttcgccgcagcccag
ccctacaaccagtggggccagtggtacggcaacgggccccagatcagccagtacgtcccc
aacgggtggcaggtccccacctatggcgtctacggccaggcctggaaccagcagggcttt
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggta
atggagcccacacagggattgaatgggagtatgctagccaaccagcccggtatgggagcc
acaggataccccacgcactga
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