Xiphophorus maculatus (southern platyfish): 102225056
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Entry
102225056 CDS
T02923
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102225056 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102225056 (irf6)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102225056 (irf6)
Exosome [BR:
xma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102225056 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
102225056
NCBI-ProteinID:
XP_005814583
Ensembl:
ENSXMAG00000007143
UniProt:
M3ZY72
LinkDB
All DBs
Position
20:complement(19044180..19052386)
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AA seq
490 aa
AA seq
DB search
MAVTPRRVRLKPWLVAQVDSARYPGLVWVDREVMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFKLVYDGTKEVPMNPLKVYDVCDIPQPN
SNQTPSDAGSHTPYDEDFGEDPDTPESLPPYPSNGTSPSPLLLWSPMGSDSSMQPSSCPP
SNEVWPKEEPGKIWPKEEPADVEMPPSNLDELPPAPLPDPILQPSPLSDIFLASPEMWIS
SLPMTDLEVQFLYRGKEVSPTVTVSNPQGCRLFYGDLGPMVNQEELFGPVNLAQLRFPTT
EHITNDKQRIFTSRLLDVMDRGLILEIRGHDIYAIRLCQCKVYWSGPCAPNPAAPNLIER
QKKVKLFCLESFLSGVVAQQRGQATSPPQFEISLCFGEEWPDGRPKERKLIMVQVIPVVA
RMISEMFSGDNNLSFDSSSVRLQISIPDIKDNIVSHLKELYSLLQNHQGQEGWALPPNSG
LNIAQALQTQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcacccctcggcgcgtccgcctcaagccgtggctggtggctcaggtggacagc
gctcggtacccgggtctggtttgggtcgaccgggaagtcatgcgcttcaggatcccctgg
aaacacgccacgagacacacacctcaacacgaggacgaggacaccatatttaaggcgtgg
gctgtggagaccgggaagtttcaggagggagttgatgaacctgatcccgccaagtggaaa
gcccagcttcggtgcgccctgaacaaaagccgggaattcaaactcgtctatgacggcacc
aaggaagtccccatgaatcccttaaaggtatacgatgtctgcgacatcccacaacccaac
agtaaccaaactccttcagatgcaggatcacatactccctatgatgaggattttggagag
gatcccgacacgccagagtctcttcctccatatccatccaatggcaccagtccttctcca
ctccttttgtggtctccaatgggttccgattcttccatgcagccttccagctgtccacct
tcgaacgaggtctggcccaaagaggagcctggtaaaatctggcccaaagaggagcccgca
gatgtagagatgcccccctcaaacctggatgaactgccccctgcccctctgcctgacccc
atcctgcagccctctcctctttctgatatcttcttggcctctccggaaatgtggatcagc
tccctcccaatgacagacttggaggtccagttcctgtacagagggaaggaggtgtctcct
accgtgactgtgagtaacccgcagggttgcaggctgttctacggggacctggggcccatg
gtcaaccaggaggagctgttcggacccgtgaacctggcacagctgcgcttcccgaccaca
gagcacatcaccaacgacaagcagaggatcttcaccagtcggctgctggatgtgatggac
cgaggtctgatcctggagatcaggggccacgatatctacgcaatccgcctctgccagtgt
aaggtgtactggtcgggcccctgcgctccaaacccagctgcgccaaatctgatagagcgg
cagaagaaggtcaagctcttttgtctggagtcgtttctcagcggtgttgtagcgcagcag
cgtggccaggcgaccagccctcctcaatttgaaatcagcctctgctttggagaggaatgg
cccgatggaagacccaaagagcgaaaactcatcatggtccaggtcattcctgtggtggct
cggatgataagcgagatgttttccggagacaacaacctttcatttgacagcagcagcgtg
cgcctgcagatttcaatcccagatataaaagacaatatagtgagccacctaaaggagctg
tacagcctgctgcagaaccaccagggccaggaggggtgggctctgccccccaactcgggc
ctgaacattgcccaggctctgcagactcagtga
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