Xiphophorus maculatus (southern platyfish): 102225150
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Entry
102225150 CDS
T02923
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102225150 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102225150 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102225150 (pdlim1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
102225150
NCBI-ProteinID:
XP_005795245
Ensembl:
ENSXMAG00000007899
LinkDB
All DBs
Position
22:complement(528439..540043)
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AA seq
321 aa
AA seq
DB search
MPPVRVVLQGPGPWGFRLVGGKDFEQPLAISRVNPGSKAAQANLCIGDIILSINGDPTES
MTHLEAQNKIKGCVEEMALSIDRSETKLWSPLSSEEGKTHPYKMNLASEPREVKHIGSSH
NRSALPFAGFGPKVVTNQYNSPSGLYSSDNIKDFNSAVDEVKTVANEPNSKALSEPAAPG
KRPALPSDSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSDKPSGFRSVKAPTTKIG
SSVGNTEKLPVCDKCGSGIVGMVVKLREKFRHPECYTCTACDVNLKQKGHFFVEEQIYCE
QHARERVTPPEGYDVVTVFPK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctgtccgggtggtgctgcagggtcccggcccgtgggggttccggctcgtcggg
ggaaaggacttcgagcagccgctggctatttcccgggtcaaccctgggagcaaagcggcg
caggccaacttgtgcattggagacataatcctgtcgatcaatggcgatccgacggagagc
atgactcacctggaggcgcagaacaagataaagggctgcgtcgaggaaatggcgctctcc
atcgacaggtcagaaactaagctgtggtctccgctctcgtctgaggaaggaaagacacac
ccttacaagatgaaccttgcgtcagaaccgcgggaggtgaaacacatcggctcgtcccac
aaccggagcgctctgccgtttgctggttttggcccaaaggtggtgactaaccagtacaac
agtccgtctggtctctactcgtctgacaacatcaaggactttaactccgccgtggacgag
gtgaagacggtggcgaacgagcccaacagcaaagcgttgtcagagccggcggcaccggga
aagcgaccagcattaccatcggactcggaggtctacaagatgctccaagaaaaccaggaa
tccgacgagccgccgcggcagtccgcttccttcaaggtgcttcaggagattctcgagaca
ggcgactcggacaaaccgtcaggcttcaggagcgtgaaggcgccaacgacaaagattgga
tcatctgttgggaacacggagaagttgcccgtctgcgataaatgtggttctgggattgtg
gggatggtggtgaagctgagggaaaagtttcgccaccctgagtgctacacctgcacagcc
tgcgacgtcaacctgaagcagaagggacatttcttcgtggaggagcagatttactgcgag
cagcacgctcgggagcgcgtcactccgccggagggctacgatgtcgtaaccgtcttcccc
aagtag
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