Xiphophorus maculatus (southern platyfish): 102225269
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Entry
102225269 CDS
T02923
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102225269 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
xma04050
]
102225269 (edar)
Cytokine receptors [BR:
xma04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
102225269 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
102225269
NCBI-ProteinID:
XP_005800772
Ensembl:
ENSXMAG00000016298
UniProt:
M4APD6
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All DBs
Position
7:21080565..21128498
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AA seq
522 aa
AA seq
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MSQSRGQKKFVFLSLILVSRLFVSAEYSSCGEYEFFNQTSNSCQACPQCQPGQEPHMNCG
YGMKDEDFACIPCAQGKYSKGKYEICRRHKDCDALYKATVRVAGTAESDAECGPCLPGYY
MLDNKPRNAYGMVCHSCQNAPSNTKECMQISKPKENPPINPGSTTVFPHRIKESPGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPGGHACCSGQVVKAVEAQTIKQDDKKDVPD
NVVIFSEKDEYDKLKAVPQKTVKSENDASSENEQLLSRSIDSDEEPSSDKQGSVESASPN
PNLCLVDLGNKPDLSLLSLGLLDRGRTSNGTPIVAASHTINIQSPNHINSVNHIASTNHI
SSMNGINNNKTPGMLQSRRKKILELYARTCNVTEGLSPTELPFDCLEKASRMLSSSYSSE
AAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESL
CVDVLGTSEVVAVAGRQSINSFHSQLVCPSQCTSPSQRCASV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagagtagaggtcagaagaagtttgtcttcctgtcgttaatattggtgtctcgt
ctgtttgttagtgctgagtactccagctgcggcgagtacgagttcttcaaccagaccagc
aacagctgccaggcctgtcctcagtgccagccagggcaagaaccgcatatgaactgtggt
tacggtatgaaggatgaggactttgcttgcataccgtgcgcgcaagggaaatactccaaa
ggaaagtacgagatctgcaggcgccacaaggactgtgatgctctctacaaagccactgtc
cgtgtagcaggaactgctgaaagtgacgctgaatgtgggccatgtttaccagggtattat
atgttggacaacaaacccaggaacgcttatgggatggtttgccattcctgccaaaatgcc
ccgagcaacacaaaagaatgcatgcaaatcagcaaacccaaagaaaacccaccaattaac
cctgggagcactacagtcttccctcacagaattaaagaatcacctggacagggtcattta
gccacagcgcttattatcgccatgtcaaccattttcatcatggctattgccattgttctc
atcatcatgttttatatcttgaaggccaagccgggtggccatgcatgttgttctggccag
gttgtgaaagctgtggaggctcaaaccatcaaacaagatgacaagaaagatgtccctgat
aatgtggtgattttctctgagaaagatgagtatgacaaattgaaagcagtccctcagaag
acggtgaaaagtgaaaatgatgcatcatctgagaatgagcagttgttgagccgcagcatc
gacagcgatgaggagccgtcatctgacaagcagggatctgtcgagagcgcgtcccccaac
cccaacttgtgcctcgtggacctgggcaacaaacctgacctctctctgctctctttggga
ctcctggaccgcggccgcacatccaatggtacccccatagttgcagccagccacaccatt
aacatccagagtcccaaccacatcaacagtgtcaaccacattgcctccaccaaccacatc
agcagcatgaacgggatcaacaacaataaaaccccagggatgctacagagtcgaaggaaa
aagatactagagctgtatgctagaacctgcaatgttaccgagggcctaagccctacagag
cttcccttcgactgcctagagaaggccagccgcatgctgagttcctcctacagcagcgag
gcggctgtggtgaagacatggaggcacctggcagagagtttcggcctgaagcgtgatgag
attggcggcatgagcgacggcctacagctctttgaaagagtgagcacggccggctacagc
atccctgacctcctcactcggctggtgcagatcgagaggctggacgctgtagagtcactg
tgcgtggatgtgctgggaaccagcgaggtggtggcagtggctggacgacagagtatcaac
agctttcacagccagttggtgtgtccgtcccagtgcacctctccctcccagcgttgtgcc
agtgtctga
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