Xiphophorus maculatus (southern platyfish): 102225306
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Entry
102225306 CDS
T02923
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102225306 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102225306 (nup98)
03036 Chromosome and associated proteins [BR:
xma03036
]
102225306 (nup98)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102225306 (nup98)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102225306 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
102225306
NCBI-ProteinID:
XP_023197838
Ensembl:
ENSXMAG00000006763
LinkDB
All DBs
Position
11:14710803..14732111
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNNSFGTPFGGGTGGFGSSSAFGQQNTSFGAAGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGGATGTSTSLFGNTGTGTSGGLFSQQSNAFGANKPTSFN
SFGTSTSSGGLFGSTNTTTNPFGASSSLFGGSGFAANQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPSAGGLFGGATPTSSAST
GLFGATASNSNFTFGPNKSTFGPATASFGTNSLFSQQNQQQANSLFKPFGAPTTTQSFTF
GNTNTMGQPNTSTMNLFGNTAAPQTGGLFGNTQTSTATGFGTSSGLFAPQSTVFGTGGTQ
PSPFGNKPPAFGPTTTSASSFGTNSSIFGIKPALTMGTGTNASTFGFGTNPAGGGLLSNK
LITGGLGAGLGTNFPTVGTGSLFGSTQNKPGTVPGMGGFGPGGFSSGSGSLGFGVTQQPV
ALTDPNANAAQQAILQQQLNVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQKALTT
PTHYKLTPRPATKVRPKALTSSGASKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVLKNLS
SSQYSSSSLNKDSDDLASPSEYPQNGHSQAEDDDLREVPGVSGRADDDPEVTQFYVNPIA
KPIPQGRAQPSLQDTISDLNMHKQPRNDLELSSDDVSASLGDDSLQEDREEEEEEEQQES
KPSPHPAGIVLHRVGYYTIPPLDDLAEMLDENGECVVENFTVGRKGYGSVFFPGEVNLTG
LNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTCAQIRSPERLVD
MNYEGRLEKASRKQGARFLEYRPETGSWVFEVSHFSKYGLQDSDEDDEVPPKIDPKKLKT
MMSLPASRLQQLLPPSQQQVAPQAQSTVVDLASGVAELDSDMADITQGIPTEGMLGGEEE
DGELPLVDMETQALTNHEPAVCSHIPSTLGINPHTLQIMKASLFTEDEEDGDMFQLHRAT
KASADISSPRLVLPGSQGRPSVGGLLQARFTSGIFPQRVESPLSRGSPAAADPLRPPRWK
SPVPAPFLLPARAPEPAIRTVGVRRLGGPVPLKESVTQGKGALLMDTGLFATRSFRVGWG
PGWTLAHCGSRLSAQSADQTEFQEQRTKTDFSFLHKPARTKPLAESPYKVVVEQLVGLEA
TQGTKMSEEEEEEERHAVLQRPLEISLKHSTVSVPEGASCPLVEPRPGVAALHDYAEWIR
ELSAERSDADPVLGHWAEVWTLCEALWGQLDPDAGPLDDYQQQLQRRHAFSDWLARGAAR
KVEEEVALAGKGRHAEALFSYLTGRRVSEACQLAQREGDHRLALLLSQASGSRFCRQLLD
LQLADWSRTQTDLHLTEERLRIFALLAGKPVWQSSGSAVNVCSELDWKRCLAVHLWYLLP
PTASVADALVAYEAAFQGSTEAGRYACTPLPPYLDGAPSLEEEEEEPERPLLDLCFHLLK
LYSDRLYGLQPLLDPLTITWRRLDYRLSWHLWGVLQALRYTHLAAPRQGLVHAAYAAQLE
SAGLWHLAVFILLHVPDHRQRERAVRELLALHCPLLETEESARRERFLTDGLLVPESWIH
EAKAVRARRDGDRHRQALHLYRAGHWNQCHRLLIQHLASDCIVNDNHDYLLEFLEGLAVP
EHSASIQDWETAGRVYLDYIRVIKSLQDIQQTDSSGAGYQLERLYSDVTSLCGRIELLPC
RTARDHLAQSEMAKRVANILRAVLSLQQGDGAADPLSVPLEQLAPHISRLPMPEDYALEE
LRGLTQSYLRQLVVSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaattcgtttgggactccgtttggcggtgggacggggggcttcggctcctct
tctgccttcggccagcaaaacacgagtttcggtgcagcaggaggttttgggacgtcggcg
ttcggggcgaccacaaacaccggaggattgtttggctccacgcagaacaaacctggcggt
ctgtttggatccagcaccttcagccagccggcaacttcctccaccagcacggggtttggg
ttcggcggcgccaccgggacgtccaccagcctgtttggaaacaccgggactggaaccagc
ggcggtctcttctcccagcagagcaatgcgttcggtgccaacaagcccacttcctttaac
agctttgggaccagtaccagcagcggcggtctgttcggttccaccaacaccaccaccaac
ccgttcggcgcctccagctcgctgttcggaggctccggctttgcagccaatcagcagcca
ggaaccacagtgaagttcaaccctccaacaggaagtgacacgatggtgaaagccggcgtg
accacgagtatcaacaccaaacaccagtgcatcaccgccatgaaggaatacgagaacaag
tctctggaggagctgaggctggaggactaccaggcgggcaggaagggccccaccaacccc
atggcgcccagcgccggtggcctattcggcggggccacccccacctccagcgcctccacc
ggactcttcggtgccactgcctccaactccaacttcaccttcgggcccaataaatcaact
tttggacccgccactgcatccttcggaaccaacagcctgttcagccagcagaaccagcag
caggccaacagcctcttcaagccgttcggcgcccccaccaccacccagagcttcaccttc
ggcaacaccaacaccatgggccagcccaacaccagcaccatgaatttgttcggcaacacg
gcggcccctcagacgggcggattgttcggaaacacccagaccagcacggccactggcttt
gggaccagttctgggctgtttgcccctcagagcactgtctttggaaccggtggcacacag
cccagtccgttcgggaacaaaccccctgcattcggacccaccaccactagcgcttcgtcg
tttggcacaaactcctcaatctttgggatcaagcccgctctgactatggggaccggaacc
aacgcctccactttcggttttggaacgaacccagctggaggaggactccttagtaacaaa
ctgatcactggtggactgggagccggactaggaaccaactttccgacggtcggaaccggg
tctctgtttggaagcacccagaacaagccgggcacggtaccaggaatgggaggcttcggc
cccggcggcttcagcagtggcagtggcagcctgggtttcggggtcacacagcagcccgtc
gcgctgacggacccgaacgccaacgccgcccagcaggccatactgcagcagcagctcaac
gtgcttgcctactcgccgtacggcgactcgccgctcttcaggaacccgctgagcgacccc
aagaagaaggaggagcgtctgaagccgaccaatccaacagcccagaaggcgctgaccacg
cccacccactacaaactgacgccgcgacccgccaccaaggtccggcccaaagcgctcacg
tcgtccggcgcctccaagtcgcagctctttgacggtctggacgacgacgagccgtcgctc
accaacggagccttcgtgcccaggaagagcatcaagaagctggttctgaagaacctgagc
agcagccagtacagcagcagcagcctgaacaaagacagcgacgacctggcctcgccttca
gaataccctcagaacggacacagccaagcggaggacgacgacctccgggaggttccaggt
gtgagcggccgggccgacgacgaccccgaggtcacccagttctacgtgaaccccatcgcc
aagcccatcccgcagggccgcgcccagcccagcctgcaggacaccatcagcgacctgaac
atgcacaagcagcccaggaacgacctggagctgagcagcgacgacgtctctgcatccctc
ggtgacgactctctgcaggaggacagggaggaggaggaggaggaggagcagcaggagtcc
aaaccgtctcctcaccctgcaggcatcgttctgcaccgggtgggttactacaccatcccc
cctctggacgacctggccgagatgctggacgagaacggagaatgcgtcgtggagaacttc
accgtcggcaggaaaggttacggctccgtcttcttccccggagaggtcaacctgacgggc
ctgaacctggacgagattgtacacttcaggcgcaaagaggtcatcgtttacccggatgac
aagaacaagccgccggagggggaggggcttaaccggcgggctgaggtgaccctggacggc
gtctggcccaacgataagacgacctgtgctcagatccgcagcccagagcgactcgtcgac
atgaactacgagggccggctggagaaggcctccaggaagcagggagcgcgcttcctggag
taccgacccgagaccggctcctgggtgttcgaggtcagccatttctccaaatacggcctc
caggattcagacgaagacgacgaggtcccgcccaaaatcgaccccaagaagctgaagacg
atgatgtcacttcctgcttccaggctgcaacagctgcttcctccatcccagcagcaggtg
gcgccgcaggcccagtccaccgtcgtggatttggcgagcggcgtggcggagctggacagc
gacatggccgacatcacgcagggcatcccgacagagggcatgctgggaggagaggaggag
gacggcgagctgccgctggtcgacatggagacacaagcgctgacgaaccatgagccggcg
gtgtgcagccacatcccgtccactctgggcatcaacccgcacacgctgcagatcatgaag
gcgtctctgttcactgaggacgaggaggacggcgacatgttccagcttcacagagcgacc
aaggcgtccgctgacatctcgtcccctcggctcgtcctgccgggctctcaaggccggccg
tctgtcgggggtcttcttcaggcccgcttcacctccggcatcttccctcagcgcgtggag
tctcctctgtcccgcggttccccggcggcagccgacccgcttcggcctccacggtggaag
agtccggtccccgccccgttcctgctgccggcccgggccccggagcccgccatcaggacg
gtaggggtgcggcggctgggcggccccgtccctctgaaggagtccgtcactcaggggaag
ggggcgctgctgatggacaccggcctgttcgccacccgctccttcagagtgggctggggt
cccggctggaccctggcccattgcggcagccgactcagcgcacagtccgctgaccagaca
gagttccaggagcagcgcaccaagacggacttcagcttcctgcacaaaccggcccggacc
aaaccactcgctgagagcccctacaaggtggtggtggagcagctggtgggactggaagct
actcaggggacgaagatgagtgaggaagaagaggaggaggagcggcatgcggtgctgcag
cgccccctggagatcagcctgaagcacagcaccgtcagcgtccctgagggcgcatcctgt
ccgctggtggagccgcggcccggcgtggcggcgctgcacgactacgccgagtggatcagg
gagctgagcgcggagcgcagcgacgctgaccccgttctgggccactgggccgaggtgtgg
acgctgtgcgaggccctatggggccagctggacccagacgccggcccgctcgatgactac
cagcagcagctgcagcgccgccacgccttttccgactggctggcccgcggcgccgcccgc
aaggtggaggaggaggtggcgctggcggggaagggccgccacgcagaggcgctgttcagc
tacctgacgggccgccgcgtcagcgaggcgtgccaactcgcccagagggaaggcgaccac
cgcctggccctgctgctgtcacaggcctccgggtcgcggttctgccgccagctgttggac
ctgcagctggccgactggagtcggacgcagactgacctccacctgaccgaagagcggctg
cggatcttcgccctgctggccgggaagccggtgtggcagtcgtccgggtcagcggtgaac
gtctgctcggagctggactggaagcgctgcctggccgtccacctgtggtacctgctgccg
cccaccgcctccgtggccgacgcccttgtcgcctacgaagccgctttccagggctcaaca
gaggctggcagatacgcctgcacaccactgccaccgtacctggatggggcgccatcccta
gaagaggaggaggaggagcctgaacggccgctgctcgacctctgcttccacctgctgaag
ctctacagcgacagactgtacggcctgcagccgctgctcgacccgctcaccatcacttgg
cggcgcctggactaccggctcagctggcacctgtggggcgtgctgcaggcgctgcgctac
acccacctggccgcgccgcgccagggcctcgtccacgccgcctacgccgcccagctggag
agcgccggcctctggcacctggccgtcttcatcctgctgcacgtccccgaccacaggcag
cgggagcgcgccgtcagggagctgctggcgctgcactgccccctgctggagacagaggag
tcggcccgcagggagcgcttcctgaccgacgggctgctggttccggagagctggatccac
gaggccaaggcggtccgggcccggcgggacggggaccggcaccgccaggccctgcacctg
taccgggccggacactggaaccagtgccaccggctgctgatccaacacctggcctcagac
tgcatcgtcaacgacaaccacgactacctgctggagttcctggagggcctggcggtacca
gaacacagcgccagcatccaggactgggaaacggccggcagagtctacctggactacatc
cgggtcatcaagtccctgcaggacatccagcagacggacagctccggtgccggctaccag
ctggagcggctctactctgacgtgacgtcgctctgcggccgcatcgagctgctgccctgc
cggaccgccagggaccacctcgcccaatcagagatggcgaagcgcgtggcgaacatcctg
cgggccgtgctgagcctgcagcagggcgacggcgccgccgacccgctcagcgtcccgctg
gaacagctggcgccgcacatcagccgcctgcccatgccagaggattacgctctggaggag
ctgcgcggcctgacccagtcttacttgcgacagctcgtcgtcagccagtga
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integrated database retrieval system
