Xiphophorus maculatus (southern platyfish): 102225327
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Entry
102225327 CDS
T02923
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102225327 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102225327 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102225327 (usp30)
04121 Ubiquitin system [BR:
xma04121
]
102225327 (usp30)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102225327 (usp30)
Peptidases and inhibitors [BR:
xma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102225327 (usp30)
Membrane trafficking [BR:
xma04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
102225327 (usp30)
Ubiquitin system [BR:
xma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102225327 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
102225327
NCBI-ProteinID:
XP_005795160
Ensembl:
ENSXMAG00000018244
LinkDB
All DBs
Position
12:18076937..18084912
Genome browser
AA seq
502 aa
AA seq
DB search
MLWCRPESWDKLVGEFLGTGPTIRNKMLKNWGLVGGIAAAIAAGAYVLWGPITERKKRKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFVKWLERFSGLPSIQSCKDNQLSFTLLQLLKAL
SSEEPGDEEVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERNRQPKVTHLF
DMQSLESLPDEEDKTVACISRAPLHPIPGLWKFQHPFHGRLTSNMSCKHCEIQSPVRYDS
FESLSLSIPLPQWGRPLSLDQCLQHFISSETIKEVECENCTKLQQSSTRNGQVFESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEYLSMDRYKHNSSTQRSQRFT
STPIAIKTESLEDSTERLKANGTGAEHHNNNKPFSNGTCSSVFLLSPGLNPQLGLTYDFS
SAEYLFQLTAVLVHHGDMHSGHFVTYRRSPPSPCSASPFSSQWLWVSDDSVRKASLQEVL
SSNAYMLFYERVRLPTIDRVVA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagaccagaaagctgggataagcttgtgggggagtttcttggcacagga
cccacaatcaggaacaagatgctaaaaaactggggtctcgtcggagggatcgcggctgct
attgcagctggagcatacgtcctgtggggcccgatcactgagaggaagaaaaggaagaga
ggaatggtcccaggtctgctgaacttgggcaacacctgcttcctgaactccttgcttcag
ggtttggcagcatgtccgtctttcgtcaaatggctggagaggttttcaggcctgccctcg
atccagtcatgtaaagacaaccagctgtccttcacgctgctgcaactactcaaagctctg
tccagtgaggagcctggagacgaggaggttttagatgctggatgcctcctggatgttctc
agactgtatcgctggcacatcagctcatttgaagagcaggatgcacacgaactttttcac
gtcctcacgtcttctctagaggaggagcgaaatcgacaacctaaagtcacacatttgttt
gacatgcagtccctggagtctcttcctgatgaagaggacaaaactgtggcctgcatcagt
cgagctcctcttcatccgataccaggtctctggaagttccagcatccttttcatggtcgt
ctaacgagcaatatgtcgtgcaagcactgtgaaattcaaagtccagtgcggtacgactca
tttgagagcctctctttgtccatccctcttcctcagtggggtcggcctctctctctagat
cagtgtctgcagcatttcatttcgtcagagacaatcaaagaggtggagtgtgaaaactgc
acaaagcttcaacaaagctcgacaagaaatgggcaagtttttgaaagccagaggacaacg
tttgttaaacagcttaaacttggaaagctccctcagtgcctctgcatccacctacaaaga
ctgacgtggtccagtgaaggaacgcccatcaagcgacaggagcacgtccagttcacggag
tatctatcaatggatcgctacaaacacaacagctccacacagaggagtcagcggttcaca
tcgactcctatagccataaaaacagaaagtttggaggattccacagaaaggctaaaagct
aatgggacaggtgcagaacatcataacaacaacaagcctttctctaatggaacctgttct
tctgtatttcttctctctcctggtttgaacccacagctcggtctcacgtatgacttcagc
tccgcagagtatttattccagctaacagcagtattggttcaccacggtgacatgcactca
ggacattttgtcacctaccgccgcagccctccctcgccctgcagcgcctcacccttcagc
tctcagtggctctgggtgtctgacgactctgtgcggaaagccagcctgcaggaggtgctg
tcttcaaacgcgtacatgctcttctacgagagagtgcgactgccgacgatcgatcgagta
gtcgcctga
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