Xiphophorus maculatus (southern platyfish): 102225346
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Entry
102225346 CDS
T02923
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102225346 (chd2)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102225346 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102225346
NCBI-ProteinID:
XP_014323984
Ensembl:
ENSXMAG00000002707
UniProt:
M3ZKN4
LinkDB
All DBs
Position
2:10299888..10331092
Genome browser
AA seq
1812 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNRSASESGSQSESEHGSVRRRSHNSESNSSSE
SESRSESESESIGSKSQQATSEAKDKPVRKKERLADVKKMWEEHPDVYGVRRSNRSRQEP
ARLNIGAEGSSDSESESPKRKSSRTKKKENIWKDDDSIDEEEEEEKEETSDSSDSEQEEK
KVRSRRLPARRPQTKSSKKQQSQKGRKLRKQESSAEDDDDDDDDDDDDEDDTPKRQTRRR
GATKIKSYKEDQHDFETDSDDLIEMTGDAGEEQQDDDSETIERVLDCRTGSKGATGASTT
VYAVEENGDPCEGFDPEKDEGETQYLIKWKGWSYIHNTWESIDSLTQQKVKGLKKLDNFK
KKNDELNSWLSKASPEDVEFHNCQQELTSDLTKQFQVVERVIATKTGKTPGSSDFPSHSH
KTPSSNEPEYLCKWMGLPYSECSWEDGALVRKKFQHCIDGFMSRNSSKTIPSKDCKVLKQ
RPRFVALKKQPSYIGDENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFL
SYLFHQHQLYGPFLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKTIRDYEWVNHQ
TKRIRFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKSLMEFRSNHRLL
ITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKK
DVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCN
HSFLIKLPEEGDGETQLESLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDIL
AEYLTKKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVV
IFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRM
DTTGRTVLDNNSGNSNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIEEILRLAE
TRETDQGSSATDELLSQFKVANFSSMEDTTPEFEEKPIREWDDIIPEEQRRKIEEAEKQR
EMEDIFMLPRSRSSNKRAQANDSDSDVGSKLKQRSSGSDSETDDSDDDKKPKKRGRPRAR
KNNVEGFTDAEIRRFIKAYKKFGSPLERLEAIARDSELVDKSIADLKRLGELIHSSCVTA
VQEHEEQLKENPVEAKGHGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKVVPLNPAERN
KFILTCRVKVAHFDVEWDLQDDTQLLLGIYEHGFGNWDLIKTDPDLQLADKILPDDPNKK
PQGKQLQARAEYLLKLLKKEQDNAILSKSGEEVKVKKRKPRAKKEAKVLKDEQGNEISSP
RLSDNLSEEGEVKEEGAEKSPVKKRQKKKDNKENKEKQGTPKKEKDGDKEKKTAKPRKEK
AKAAKGKKTQGPVHITAGSEPVPIEGKEDDELDQETFSICKERMRPVKKALKQLDKPDEG
LSDQEQLQHTRTCLLKIGDRITECLKAYSDPEHVKIWRRNLWIFVSKFTEFSARKLHKLY
KMAQKKRSHDEEKEHKKKDDSSGRIKSFRPEPSGSSRDSTGIPSSKSAPLPSQSGTHGHH
REPYNAANKRHFGNNDRGDWPRDRKYGYQGNSNQPWQGDRHHPYDPHRYKDHYGDRRPHG
DAYRSSGGYRNNTSPRKRPYEQYGNDRDHRGHRPYYDRHPDNKRRRPDEFHPSYHQGRDG
PPQDFRRMPDHRTQGPPGPEHYNRPFHPDKPLPLMDPRSPQAQKSPQDSRSPLERPMDPG
LMADPNWNSRKT
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataaaaataaaaaacaagaggacgaaggatcgacccagagtaatgcttca
agcaattcagcttcagaggagtccaaccgttcggcgtccgagtctggaagtcagtcagaa
agcgagcatggcagtgtgaggaggcgctcgcacaactctgagtcaaacagctcctctgag
tcagagagccgctcagagtcagagagcgagtccatcgggtccaaatcgcagcaagccact
tctgaggccaaagacaaaccagtcagaaagaaggagcgcctggctgatgtgaagaagatg
tgggaagaacacccagatgtgtacggcgtcaggaggtcgaatcggagcagacaggagccg
gctcgtctcaacatcggagctgagggcagcagtgactcggagagcgagagccctaaaaga
aaatcttctcgaacaaagaaaaaggaaaatatctggaaagatgatgactcaattgatgaa
gaggaggaggaggagaaggaggagacatccgacagttcagacagtgagcaggaagagaaa
aaagttagatccagacgacttcctgctagaaggcctcagaccaaatcatcaaaaaagcag
cagtctcaaaaaggaagaaagttgagaaaacaggaatcgtcagctgaagacgacgatgat
gacgacgacgacgatgacgacgatgaagacgatactccaaagagacagactcgaagaaga
ggggccacaaaaattaagagctataaagaagatcagcatgacttcgaaaccgactctgat
gacctgatcgaaatgaccggagatgctggtgaggagcagcaggacgacgacagcgaaacc
atcgagagggttcttgattgcaggaccggcagcaaaggagccactggagcttccaccact
gtgtacgccgtggaggagaacggggacccatgtgaaggtttcgatcccgagaaagatgaa
ggagagactcagtatctgatcaagtggaagggctggtcctacatccacaacacctgggag
agcatcgactcgctaacgcagcagaaggtcaaggggttgaagaaactggacaactttaag
aagaaaaacgatgagttgaattcttggttaagtaaagcgtctcctgaggatgtggagttt
cataactgccagcaggagctcacatctgacttgacgaagcagtttcaagttgtggagcga
gttattgcaacaaaaacaggaaagactccaggttcctctgattttccctcccacagtcac
aagactccatcctcgaacgagccggagtacctgtgcaagtggatgggcttgccgtactct
gagtgcagctgggaggacggcgccttggtcaggaagaagtttcagcactgcatcgacggc
ttcatgagccgaaactccagtaaaaccatcccgtcgaaggactgcaaggtattaaagcaa
aggccgaggtttgtcgccttaaagaaacagccatcatatattggtgatgagaaccttgag
ctaagagattaccagctggacgggttgaactggctggctcactcctggtgcaggtgcaac
agcgtcatcctggccgatgagatggggctggggaagaccatccagaccatctccttcctg
tcctacctgttccaccagcatcagctctacggaccctttctggtggtggtgcctctgtcc
acgttgacctcctggcagagggagtttgacacctgggctccggacatgaacgtggtggtc
tacttgggcgacgtcatgagcaggaaaacgatccgtgactacgagtgggtgaaccatcag
accaaaagaatccgtttcaacgccctcttaactacctatgagattctgcttaaagacaag
ggcgtcctggggaatattaactgggccttcctgggtgtggatgaagctcacaggctgaag
aatgatgactccctgctctacaaatccttaatggagttcagatccaaccatagactcctc
attaccggcactccgctacagaactccctcaaggagctctggtctctgttacacttctta
atgcccgacaagtttgactcctgggaggattttgaggatgaacacggaaaaggaagggac
aatggttatcagagtctccacaaagtcctggagccattcctgctccgaagggtcaagaaa
gacgtagagaaatctctacctgccaaagtggagcaaatcctccgcgttgacatgtcggcg
cagcagaagcagttctacaagtggattttaacaaggaattacaaagccctttccaaaggt
acccgcggcagctccagtggcttcctaaacattgtgatggagcttaaaaagtgctgcaac
catagtttcctcattaagctgcctgaggagggagacggagaaacgcagctggaaagcctc
caggctttggtgaggggcagtggaaagctggtcctgctggacaaactgctgacccgactc
cgcgaacgaggcaacagagtcctgatcttctcccagatggtcaggatgttggacatactg
gccgaatatctcacaaagaagcgatacccttttcagcggctggacggttcaataaaggga
gaaatccgaaagcaggcactggaccactttaatgcagagggatcagaggacttctgcttc
ctgttgtccaccagagctggaggtttgggtattaacttggcctcggcagacactgtcgtc
atattcgactcggactggaaccctcagaacgacctgcaggcccaggccagagcccacagg
atcggacagaagaagcaggtgaatatatatcggctcgtcactaaaggaacggtggaagag
gacatcatcgagagggcaaagaagaagatggttttggaccatctggtcattcagagaatg
gacacgacaggccgaacggttctggataacaactcaggaaactcaaattcaaaccccttc
aataaggaagaactgactgctattctcaagtttggtgctgaagatctgttcaaagaggca
gagggagaggagtccgagccacaggagatggatatagaagagatcctgaggttggcagaa
acaagagaaactgatcaaggctccagcgctacagatgagcttctatcacagtttaaggtc
gccaacttctccagtatggaagacaccactccggagtttgaggagaagcccatacgggaa
tgggacgacatcattcctgaggagcagcggcgtaaaattgaggaggcggagaagcagcgg
gagatggaagacatcttcatgctgcccaggagcaggagctccaacaagagggctcaagcc
aatgacagcgacagcgatgtgggctcgaagctgaagcagcgctcgtctggctcagacagc
gagacggatgacagcgacgacgacaagaagccaaagaaaagaggcagacctcgagctcgc
aaaaacaacgtggagggcttcaccgatgcagaaatccgcagattcattaaagcctataag
aagtttggatcgccactggagagactggaagccatcgcccgagactctgagttggtggac
aaatccatcgcagacctcaagaggctgggcgaactgattcactccagctgcgtgacggcc
gtgcaggaacacgaggaacagctcaaagagaacccagttgaagccaaaggtcatgggaaa
cgcagaggaatcaacattaagatttcaggagttcaggtcaatgccaagtcaatcatccag
cacgaggaggagtttgagccgcttcacaaagtcgtgccccttaaccccgctgagaggaac
aagttcatactgacttgcagggttaaagtcgcccactttgatgtggagtgggatctgcag
gacgacactcagcttctactgggcatctacgaacacggctttggaaactgggatctgata
aagacagatcccgacctgcaactggctgataagattcttccagacgacccaaacaagaag
cctcagggcaagcagttgcaggcgagagctgagtatttgctcaagctgcttaagaaagag
caagacaacgcgattctatctaaatccggagaggaggttaaggtgaagaagaggaagccc
cgagctaagaaggaagccaaggttctcaaagacgagcagggcaacgagatctcgtccccc
cggctgtccgataacctgtcagaggaaggagaggtcaaggaagagggagcggagaagtct
cctgtgaagaagaggcaaaagaaaaaagataacaaggaaaacaaagaaaaacagggaaca
cctaaaaaagagaaagatggagacaaggaaaagaaaaccgccaagcccagaaaggagaag
gctaaggcagccaaagggaagaagactcaaggtccagttcacatcacggccggttccgag
cccgttcccatcgaaggaaaggaggacgacgagctcgaccaggaaacctttagtatttgt
aaggagcgcatgcggccggtgaagaaggccctcaagcaactggacaaacccgatgaagga
ctgtccgaccaggagcagctccagcacacacgcacatgcctgctgaagatcggagaccga
atcacagagtgccttaaagcgtacagcgaccccgaacatgtcaaaatatggcgcaggaat
ctctggatttttgtgtcaaagttcacagagttcagtgccagaaagctgcacaagctttac
aaaatggctcaaaagaagcgatcgcatgatgaagagaaggagcacaagaagaaggacgat
tcctcagggaggataaaatccttcagaccagaaccttcggggtccagtcgagactccaca
ggcataccgtcctccaaatccgctcctctcccgagccaatcaggaacacacggacaccac
agggaaccatacaacgctgctaacaaacgacactttggcaacaacgatcgaggagactgg
ccgagagatcgtaaatacggttatcaaggaaacagcaatcagccttggcagggagaccgc
caccatccatacgaccctcatcgttacaaggatcactacggagatcgacgtccccacgga
gacgcgtatcgaagctcaggaggttaccgtaacaacacctctcctcgaaaaaggccgtat
gagcagtacggcaacgacagggaccacaggggacatcggccctattatgacaggcacccg
gacaacaaacggagacgccccgatgagttccaccccagttaccaccagggcagagacggc
cctcctcaggacttcaggaggatgccggatcacagaacacagggtccgccggggccggag
cattacaaccggcccttccacccagacaaacccctcccgctgatggacccccgctccccg
caggctcagaagtctccgcaggactcccgctccccactggaacgccccatggatcccggc
cttatggcggatccaaactggaacagcaggaaaacatag
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integrated database retrieval system
