Xiphophorus maculatus (southern platyfish): 102225349
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Entry
102225349 CDS
T02923
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
xma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102225349
03015 mRNA surveillance pathway
102225349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102225349
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102225349
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102225349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF285
PP-binding
Motif
Other DBs
NCBI-GeneID:
102225349
NCBI-ProteinID:
XP_005799028
Ensembl:
ENSXMAG00000012440
UniProt:
A0A3B5PW30
LinkDB
All DBs
Position
1:27199740..27204840
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AA seq
487 aa
AA seq
DB search
MAEDSWALAVDVQEATTPSFQFQFSKKINRIRGPLNVKEDVNANVVQNKIQNEGGEGDGD
KVDLAEQSLLNKLIRHSLVKNRNQVEVQQADPSSPLFSVKTFQELRLKPELLQGVFSMGF
NRPSRIQENALPLMMAEPHQNLIAQSQSGTGKTAAFSLAMLSHVNPDNTWTQCLCVAPTY
ELALQIGQVIEQMGKFCPNVKLAYAIRGNRMERHVKLQEQIVIGTPGTILDWCTKYKLID
PQKITMFVLDEADVMIAMQGHRDQSIRIHRLLNKDCQMLLFSATFEDSVMKFAERVIPDP
NIIRLKREEETLDTIKQFYVLCREKEDKFTALCNLYGCLTIAQAMIFCHTRKMAAWLASS
LIKEGHQVALLSGEMAVEQRAAVIERFKNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DLEGNADNETYLHRIGRTGRFGRRGFAVNMVDSINSMEIIKQIEMHFNRKITKLDTSNLE
EMEKMTI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagactcttgggcgttagcagtggacgttcaagaggcgacaacgccatcattt
cagtttcagttctccaaaaagatcaacagaatacgaggtccattaaacgtgaaggaagac
gtaaatgccaacgtggtgcagaacaagatccaaaatgaaggaggtgaaggagatggcgac
aaagttgacctggccgaacagtctttgcttaataaattgatccgccactctctggtgaag
aaccggaaccaagttgaggtccaacaggcggatcccagctctcctctgttctccgtgaag
actttccaggagctcagactgaaacctgaattgttgcaaggtgtcttcagcatgggattc
aacagaccgtccaggatccaggagaatgctttgcctctgatgatggcggaaccacatcag
aacctgattgctcagtcgcagtctggcacgggtaagactgcagcattctctctggccatg
ctgagtcatgtgaaccctgacaatacctggactcagtgtctgtgtgttgcgccaacgtac
gagctcgcgttgcagatcggccaagtgatcgaacaaatgggcaaattttgtccaaatgtg
aaactggcctacgccattcgagggaacagaatggagcgacatgtcaagttgcaagagcag
attgtcattggaaccccaggcaccatccttgactggtgcaccaagtacaagcttattgac
ccacagaagatcacaatgtttgtgttggatgaagctgatgtgatgatcgccatgcagggt
catcgggaccagagcatccggatccacaggctgctcaacaaagactgtcagatgctgctg
ttctctgcaacgtttgaggactctgtaatgaagtttgccgagcgagtgattcccgatcct
aatataatccgactgaaacgagaagaggagacgctggacacaatcaagcagttctatgtg
ctctgcagggagaaggaggacaagttcacagcgctctgtaacctgtatgggtgtctgact
attgcacaggcaatgatcttctgccacactcggaagatggctgcctggctggcctctagc
ctgataaaggagggccaccaggtggcgctgctgagcggggaaatggcagtggaacagaga
gccgctgtcatcgaacgcttcaaaaacggcaaagagaaagtgcttgtgaccaccaatgtg
tgttccagaggtattgatgtggagcaggtgtcccttgtggtgaattttgacctcccggtg
gatttggaagggaacgctgacaacgagacctacctgcacaggatcggccgcacaggacgc
tttggcagaagaggctttgctgtcaacatggtggacagcataaacagcatggaaatcatt
aagcaaattgaaatgcatttcaacaggaaaattacaaaactcgacaccagcaaccttgag
gaaatggagaagatgacaatttaa
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