Xiphophorus maculatus (southern platyfish): 102225375
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Entry
102225375 CDS
T02923
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102225375 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102225375 (gtf2f1)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
102225375 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
102225375
NCBI-ProteinID:
XP_023205375
Ensembl:
ENSXMAG00000014047
LinkDB
All DBs
Position
16:15618917..15624315
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AA seq
535 aa
AA seq
DB search
MTSLGGSSSSTTEYTVRVPKNTTKKYNIMAFNAGDRVNCSSWTQARMERDMSARRIYGEE
ETPESGAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGIKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTQQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGDDDEDETEKGGKKKKKGGRKGGDLLIHDLDDDLEMSSDDSDSSMGEDGESKA
KTKKATGKGKSKKKKQKSNDKEALEDSDDGDYEGLEVDYMSEESSSDEEPTNEKPTKAEE
HPKGIDEASESEEDSEEEKQNEEEAKEEEEEEEGKKTPVQMEKKKKKDSSGESDSSDDSD
IEGETASALFMVAKKKRTPPKRPGGRGSAGSSRTGSRPGTPSIDSASTSSTLRAAASKLE
QGKRQIQTGSTDSPAAKRLKMEPSSQSPVPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRY
LIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKMVNDKMHFYLTE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactgggtggaagcagttcctcaaccacagagtacactgtgagagtccccaaa
aacaccaccaaaaagtacaatataatggcttttaacgcaggggatagagtcaactgctca
agctggacacaggcacgtatggaaagagacatgagtgctcggcgaatatatggggaggag
gagacaccggagagtggcgcaggtagcgagtttggcaaaaaacagcgagaggaagctcgg
cgaaaaaagtttggaattgttacccgagagttcaaagtggaggatcagccatggatcttg
aaggtcaatggcaaagctggcaagaggtttaagggtataaagaaaggtggagttacagaa
aatgcatcctactacatttttacccagtgtccagatggagcttttgaagcctttcctgtt
catgggtggtataactttacgcagcaggcaaagcatcgaacgttaaccgctgaagaagcc
gaagaagagtggggcaggcggaacaaggtcgtaaaccacttcagcattatgcttcagaga
cggcttcgggagcaggagcgtggtgatgacgatgaagacgagacagaaaagggtgggaag
aagaaaaagaaggggggccgtaagggtggcgaccttctcatacacgacctagatgatgac
cttgagatgagcagtgatgacagtgacagcagcatgggagaagatggagaaagcaaggca
aagacgaaaaaagctacagggaaagggaaatcgaagaagaagaagcaaaagagcaacgat
aaggaagcccttgaagacagcgatgatggagattatgagggtctggaagtggattatatg
tcagaggaaagcagctcagacgaagagccaacaaatgaaaagccaaccaaagcagaagag
caccctaaaggaatcgatgaggcatctgagagtgaggaagatagtgaagaagagaaacaa
aatgaagaagaggctaaagaggaggaagaagaagaggaagggaagaaaaccccggtccag
atggaaaagaagaagaaaaaagacagcagtggcgaatcagacagctctgacgacagcgac
attgaaggagagaccgcttctgctttgttcatggtagctaaaaagaagcgcacgcctccc
aagcggcctggtggacgcggctctgcaggcagctccaggacgggtagtcgtcctgggacc
ccatccatagattccgcctccacctccagtacactgcgtgctgctgccagcaaactagag
caagggaagagacaaattcagactggaagtactgactcaccagcagccaaaaggctcaag
atggagcccagcagtcagagccctgtcccctctgggaagagcacacctcaacccccatct
ggcaaatccactccaagctcaagtgacgtgcagctgacggaggaagctgtgcgccgctac
ctgatccgtaagccgatgaccaccaaagacttgctgaagaagttccagacaaagcgcaca
ggtctgagcagcgagcagacggtcaacgtgctcgctcagatcctgaagcgtctcaatcca
gagcgcaagatggtcaatgacaaaatgcacttctacctcacagagtaa
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