Xiphophorus maculatus (southern platyfish): 102225384
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Entry
102225384 CDS
T02923
Symbol
virma
Name
(RefSeq) protein virilizer homolog isoform X1
KO
K22910
protein virilizer
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102225384 (virma)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
102225384 (virma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
102225384
NCBI-ProteinID:
XP_023186757
Ensembl:
ENSXMAG00000013134
LinkDB
All DBs
Position
3:complement(16864288..16882263)
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AA seq
1807 aa
AA seq
DB search
MAGDTSTELLFLDTFKHQSAELTNVDVVRFPCGVLITEVRVIPPGIKAHSNLPDNRAFGE
TSPHAFQLELFFNNVTKPNSPTFHRLGSLEYDENKSIVFRPSGKVNTDGLVLRGWYTSLT
LAVYGTAERPHGHDHGSPPPPPPPPPQQPTGLKRIIKQEWEKDDQYNGSPPRPAPRGPRT
PPGPPPPDDDEEEQVPMAVGVVKDEPSQGRDDYLEAVSPERSLPADEPFSDAEQEEEGEE
EEEEEEQEEEEARTEGSVPEEEEEEEEEDEGEDEEEEMEEGDDGYEQISSDEDDLDNGSF
KLPTFDIDYTPEDLASVPPVQYDPYERELKPLVYFTPPYKTRFDAQLEKTSVEEPRDAGG
TEGAAGGEEAEVVAQLKELLAGSGEERDARWVTALEEAPGLLNKGLAYLIKQGEAEEPVR
VLVLWALQALSMEIALTQPIALNLRQLKAGAKLASCLAECPQGLAELLREGALNVLLELL
HADHVSSTLKLSILRALDALISAPAGVEAFLQAGNSEKSGYQRLVQLFLREETVRVINAG
NAILQKSHMYEVLVSLQHAAAAWSEPQQEEMEDAESPMEEEPSLSSAPVSEAELERLAGV
LEELHHLLETASHCMVQPPGKAFPTTARITGPPERDNPYPTLYRYMHACHFLESTIVVLS
AAAAVGHVGVTQAIKELLRFLSLTQSGLLYLLAQAAPTNLLLRLLASVAESEGEESLPAA
GEGALTGPGFGEEGFCMWLMQALHALQGVSELMSHVAAGGEGGVALEEGDNSEVLGTLHA
LYLMTFTQTGRSAVAHVLSLESNLSCLVSLLQHHSKETQGEAKSRKAVTYNYACMLVLML
VQTSNELRMMEQYAAPLLTVAKADDTNAKLQELSKWLEPLEKLRFEISSIPTLINYIKQN
VENVLNIEGTGLVTALRVLYHIACPPPAVEGQQRDLKWSLAGVQLFSGEGLDTCVRILQK
LCGVLLQPWRVHGHMGPTPQRCMILSVCISTLRLLRTMLTELLRGGAFQFRDTRVANVLV
TLHMMVCSIPASGRLDGEETRVQALIVDVLLTFTQGVSEEVTHTEETLASNTWSLMLKEV
LNSLLKAPEGLFSGLTLLSELLPLPLPMQSTQALSVQDVAIALNTRKLWSMHIRVQWKVL
SEVLRCVCSTSCPPLLTMLRRVCVQLADLSSPTATLVMKTVLELLSEELQPAEGKSVCWG
QVLRLLSLLDALVSQRACKSSTLHLLSGSVSGDEQVADLFPLLLSLLVPPAGHSLQQQQC
SVLVGTILQSLCDQDISLVVAPPSEGCVSEAEQLANALPGRDMMSSVCNSVLEVLGNKEA
SIPLLLTCIRTLTFLTEHDYGIYHLKVTLRKHGPEVCSLLKRLVVSFNKDSTDLISALLD
FLRQILNTETTCAEEGQGSSEEPACVAPRLLSSSEMKSLLQFEDSESHPLMALEKLITKL
CKEDDSLETMMENVIVLKQTLETATESPPPSETEPVLPAPETLAAQFNHRTVFILSEALD
EQLKALWFSPFQTDDIETDLDMVKVDLVGLAQECCPELDLKAELERSFLSEPSSPGHTKV
TKGFRLGKHKHETFITSSGKSDYIEPAKRAHILPAPRGRGGRGGFGQNVARPHDIFRLRK
QNTSRPPSMHVDDFVAAEFKDIANPLGILPPKRLPKSTPKPPTRGLFTGNRGRAAFHSQT
RFFTPPQPKGVLLSGNYARREGGRGLSWSGQVPAVTHRGTYSEPRGGQSNFARGPLPSRQ
LPASAYRLAIRDRAPRGRGGTGLSWLGAGGGAGAAGGGGGRGSQGSKFSGGGGSGGGRGR
HVRSFTR
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggacacctcaacggagcttctttttctcgatacatttaagcatcaaagcgct
gagctaaccaacgtggatgtggtgcggtttccttgcggggttttgatcacagaggttcgg
gtgattcctccagggatcaaagctcacagtaacttacctgacaacagagcatttggggag
acttcacctcacgcttttcagttggagctgttcttcaacaatgtcaccaaacccaacagc
cccaccttccacaggctgggcagtttggaatatgatgaaaacaagtccatagtcttcagg
cccagcggaaaggtgaacacagatgggctggtgcttcgtggatggtacaccagcctgact
ttggcggtctacggcaccgccgagcgtcctcacggacacgaccacggttcgcctcctcca
ccgccaccgcctcccccgcaacaaccaactgggctcaagcggattatcaaacaagaatgg
gaaaaagatgaccagtataacggcagcccacccagaccagcacccagagggcctcgtact
ccgcctggacctccacccccagatgacgatgaggaggagcaagtcccaatggcagtgggc
gtggtcaaagatgaaccgagccagggccgtgacgactacctagaagccgtgtcgcctgag
cgatcgctgcccgccgatgagcctttctccgacgccgaacaagaggaggaaggggaagag
gaggaggaagaggaagagcaggaggaggaagaagcacggaccgaggggagcgttccagag
gaggaagaagaagaggaggaggaggatgagggtgaggacgaggaggaggagatggaggaa
ggtgatgatggctatgagcagatttccagtgatgaagatgacttggacaacggtagcttc
aagctgcccaccttcgacatcgactacacgcccgaagacctcgcctccgtccctcccgtc
cagtacgatccatatgaacgagaactcaaaccgctcgtctacttcacgccgccttacaag
actcgcttcgacgcccagctggagaaaaccagcgtagaggagcccagagatgctggtggg
acagaaggagcggctggtggagaggaggctgaggttgtcgctcaacttaaggagctactg
gctggtagcggtgaggagagagacgctcgatgggtcactgctctggaggaagctcctgga
ctcctcaacaaaggtttagcttatctaattaaacaaggagaagctgaggagcctgttcgc
gttttagtcctgtgggctctccaggctctgagcatggagatcgcgctcacgcagccgatc
gcactgaacctcagacaattaaaagctggcgcaaagctggcgtcctgcctggccgagtgt
ccgcagggcctggcggagctgctgcgcgaaggcgccctgaacgtgttgctggagctgctg
catgctgaccacgtctcctccaccctcaagctcagcatcctcagagctctggacgctctc
atcagcgcccccgcaggagtcgaggcgttcctgcaggctggaaattcagagaagagcggc
tatcagcgtttggtgcagctgttcctgcgtgaggaaaccgtccgggtgataaatgcaggc
aacgccattttacagaagagccacatgtatgaggtgcttgtcagcctccaacatgcagcc
gcggcttggagcgaacctcaacaggaggagatggaggatgctgagagtcccatggaggag
gagccttcactgagctccgcccccgtcagtgaggccgagctcgaaaggcttgctggggtt
ttggaagagcttcatcacctgctggagacggcctctcactgcatggtgcagccccctggg
aaagcgttcccaactacggccagaataaccggaccgccagagagggacaacccttacccg
acgctgtacaggtacatgcacgcgtgtcatttcctggagagcacaattgtggttctgtca
gcggccgctgcagtcggacatgtcggggtcactcaggccatcaaagagctcctccgcttc
ctgtcgctcactcagtccggtctgctctacctcctggcccaggccgcgcccacaaatctc
ctgctgcgtctgctggcgtcggtggcagagtctgagggcgaggagagcctgccagcagca
ggggagggggccctcacggggccgggcttcggcgaagaaggcttttgcatgtggctgatg
caggctctccacgctctgcagggcgtgtccgaactcatgagccatgtggctgcagggggg
gaaggaggggtggccttggaggaaggggacaactctgaggtcctgggcacgctccatgct
ctgtacctgatgacgttcacgcagacgggccgcagcgccgtggctcacgttctgagcctg
gagagcaacctgtcctgcctcgtcagcctgctgcagcaccacagcaaggagacacagggt
gaggccaaatctcgtaaagcagtgacgtataactacgcttgtatgttggtattaatgttg
gtgcagacgtctaatgagctgcggatgatggagcaatatgctgctccgctgctcactgtg
gccaaggcggatgacacgaatgccaagctgcaggagcttagtaaatggttggagcctctg
gagaaacttcgctttgagatcagcagcattccgactctcatcaactacatcaagcagaat
gtggaaaatgtgttgaacattgagggaactgggctggtcactgctctgagagttctctat
cacatcgcctgtccgcctcctgctgttgaaggtcagcagagggatctgaagtggagcctc
gcaggcgtccagttgttctccggcgagggtctggacacgtgcgtgcgcatcctccagaag
ctgtgcggcgtgctgctgcagccgtggcgcgttcacgggcacatgggtccgacgccgcag
cgctgcatgatcctgagcgtgtgcatcagcacgctcaggctgctgcgcaccatgctgacg
gagctgctccgcggcggggcctttcagttcagagacacacgcgtggccaacgttctggtg
acgctccacatgatggtgtgctccattccggcttctgggcgtctggacggggaggagacg
agagtgcaagcgctcatcgtggacgtgctgctcaccttcacgcagggcgtcagcgaagag
gtcactcacacagaggagactctggccagtaacacctggtctctgatgctcaaggaagtc
ttgaattcccttttaaaagctcctgaaggtttgttctctggcctaacgctgctctctgaa
ctcctgcctcttcctctgccgatgcagagcactcaggcgttatcagtccaagatgttgct
atcgccttaaacaccaggaagctgtggagcatgcacatccgggtccagtggaaagttctg
tcggaggtgctgaggtgtgtgtgctccaccagctgcccgcctctcctgaccatgctgagg
agggtctgcgtccagctggctgacctgtcctcgcccaccgcaacgctcgtcatgaagacg
gtgttggagctgctgtctgaggagctgcagccggccgaggggaaaagtgtttgctggggg
caagtcctgcgtctgctgtcgctgctggacgctctggtgtcgcagagggcttgtaagagc
tccacccttcacctgctgtcgggctccgtctctggagacgaacaggtggcagacctgttt
cctctgcttctgtctctgctggtgcccccagctggtcactcgctgcaacagcaacagtgc
agtgtgttagtggggacaatactgcagtccctgtgtgaccaggacatttctctggtggtg
gcgccacccagtgagggctgcgtgtcggaggctgagcagctggctaatgcacttccaggc
cgagacatgatgtcttcggtgtgtaattccgtgttggaggttttagggaataaagaggcc
agcatccctctgcttctcacctgcatcaggacattgactttcctcacagagcacgactac
ggaatctaccacctcaaagtcactttgaggaaacatggtccagaggtttgctcgctgctg
aagaggctggtggtttccttcaacaaggactcgacggatctgatttcagctctgcttgac
tttctgaggcaaatcctaaacacggaaacaacgtgtgcagaggaaggccagggctccagt
gaggaacctgcctgtgttgctccacgcttgctgtcgagctcagagatgaaatctctgctg
cagtttgaagactcagagtcacacccgctaatggccttagagaagctaatcacgaaatta
tgtaaagaagacgattcactggaaaccatgatggagaacgtgattgtcctgaagcagacg
ctggagacggccacagaaagtcctccaccgtcagaaaccgaacccgttctgcccgcaccc
gaaacgctggcagcccagttcaaccacaggacagtgtttattctgtcagaagctctggat
gagcagctcaaagctctctggttctctcctttccaaactgatgacatagaaacagatcta
gacatggtgaaggtggatctggtgggcttggctcaggagtgctgtccagagctggatctg
aaggctgagctggagcgctccttcctctctgagccgtcctctcccggtcacacgaaggtc
accaaaggtttccgactgggcaaacacaaacacgagacgttcatcacatccagcggtaaa
tccgactacattgaacctgctaaaagagcccacatcctgccggcgccccgcggccgtgga
ggtcgaggagggtttggtcagaacgtcgcccggccccatgatattttccggctgcgcaaa
cagaacacttcccgccctcccagtatgcatgtggacgactttgtggcagcagagtttaaa
gacattgctaacccacttgggattctgcctcccaaacgtctgccaaaaagcactcccaag
ccccccaccagagggctgtttactggcaacagaggcagagcggcctttcacagccaaact
cgctttttcaccccaccgcagcctaaaggtgttctgctctcaggtaactacgctcggaga
gagggaggccgggggttgtcatggagcggccaggttcctgctgtgacccacagaggaacc
tacagtgaaccccgcggaggtcagagcaacttcgcccgagggcctctgccttcccgacag
ctgcctgcgagtgcttatcggttggccattcgggatcgagccccacggggccgcggaggt
acgggactgtcgtggcttggtgcagggggaggcgccggcgccgcaggaggaggaggagga
cggggctctcaagggagcaaattcagtggtgggggaggcagtggaggtgggaggggcaga
catgtgcgctctttcaccaggtaa
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integrated database retrieval system
