Xiphophorus maculatus (southern platyfish): 102225390
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Entry
102225390 CDS
T02923
Name
(RefSeq) tripartite motif-containing protein 35-like
KO
K12012
tripartite motif-containing protein 35
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102225390
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102225390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
U-box
Prok-RING_4
DUF4618
zf-RING_6
Perilipin
zf-rbx1
zf-ANAPC11
zf-Nse
Gp58
UPF0242
PEHE
SidF
Motif
Other DBs
NCBI-GeneID:
102225390
NCBI-ProteinID:
XP_023194449
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Position
8:complement(3777776..3783908)
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AA seq
889 aa
AA seq
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MASKLEEDLCCSVCQDVFKDPVLLSCSHSFCKECLKNWWTEKPSRECPVCKRRSSKGDPP
CNLVLKNLCESFLQQREQRASEDLCSLHSEKLKLFCLDHQQPVCFVCSHSEKHTNHRFRP
IDEAAQQHKKKLQETLEPLKKKLELRKKVQEEFDQTAEHLKVQARHTERQIMEQFKQLHQ
FLAEEEEARLAALREEEEQKRGMMKEKMEALSREIAALSDTVRATEEELRAEDVSFLHNY
KAAVERVQRCPLLEDPQLPSGALIDQAKHLGNLAFNIWSNMENMVTYTPLVLDPNTAHPG
LHLSEDLTSLTYGEKQQLPDNPERFDLWWWSVLSSEGFNSGNHSWDVDVGDSKGGLLGVL
EESVQRKGLLKSGWFYIRFFEDKYSAYSPSAPSTRLSVQKNHQRIRVNLDWDRGKLSFSD
LDTNTHIHTFTHTFTDKMFPYFYTNKTVKILPMKISVIKQQLCHSFCKECLKNWWREKPS
RECPVCKRRSSKFDPPCNLVLKNLCESFLQQREQRASEDLCSLLFCLNHQQPVCLVCRDS
EKHTNHRFRPIDEAAQQHKKKLQETLEPLKKKLELRKKVQEEFDQTAEHLKVQARHTERQ
IMEQFKQLHQFLAEEEEARLAALREEEEQKRGMMKEKMEALSREIAALSDTVRATEEELR
AEDVSFLHNYKAAVERVQRCPLLEDPQLPSGALIDQAKHLGNLAFNIWSNMENMVTYTPL
VLDPNTAGPELHLSEDLTSLSGGEEQQLPDNPERFDWWSVLSSEGFNSGNHSWDVDVGDS
SFWDLGVLKESVQRKGRMSGLLCIEFNGCSYSACSPPARSTRLSVQKNLQRIRVNLDWDR
GKLSFSDLDTNTHIHTFTHTFTHKMFPYFYTNKTVKILTMKISAIKHEL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaagttagaggaggatctctgctgttcggtctgtcaggacgtctttaaggat
ccggttcttctgtcatgtagccacagcttctgtaaggagtgtctgaagaactggtggaca
gagaaaccatcaagagagtgtccagtttgtaagaggagatcttctaaaggtgatcctccc
tgtaatctggttctgaagaatctgtgtgagtctttcttacagcagagagagcagagagct
tcagaggatctctgctctctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtgtgtttcgtctgcagtcattcagaaaaacacaccaatcacagattcagaccc
atcgatgaagctgctcagcaacacaagaagaaacttcaggaaactctggagcctttaaag
aagaagctggagctcaggaagaaagttcaggaggagtttgatcagacagcagaacacctg
aaggtccaggcccgacacacagagaggcagattatggagcagtttaagcagcttcatcag
tttctagcagaggaagaggaggccaggctggctgcactgagggaggaagaggagcagaag
agagggatgatgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggaggagctgagagctgaagacgtctcattcctgcacaactac
aaggctgcagtggaaagagtccagcgctgccccctgctggaggatccacagctgccctca
ggagctctgatagaccaggccaaacatctgggcaacctggccttcaacatctggagcaac
atggagaacatggtgacctacactcctctggttctggacccaaacacggctcatccagga
cttcatctgtctgaagatctgaccagtttgacttatggagagaaacagcagcttcctgat
aatccagagagatttgatttatggtggtggtctgttctgagttctgaaggttttaactca
gggaaccacagctgggatgttgatgttggagacagtaaaggcgggttacttggtgtgtta
gaagagtctgttcagaggaagggactcttaaagtctggatggttttatataaggttcttt
gaagataaatactcagcatattctccatcagctccttccactcgtctctcagtccagaag
aatcaccagaggatcagagtgaatctggactgggacagaggaaaactgtccttctctgat
ctggatactaacacacacatacacaccttcacacacaccttcactgacaagatgtttcca
tatttctacactaataaaacagtaaagattctaccgatgaagatctcagtgatcaaacag
cagctctgccacagcttctgtaaggagtgtctgaagaactggtggagagagaaaccatca
agagagtgtccagtttgtaagaggagatcttctaaatttgatcctccctgtaatctggtt
ctgaagaatctgtgtgagtctttcttacagcagagagagcagagagcttcagaggatctc
tgctctctgctcttctgtctgaaccatcagcagccagtgtgtctcgtctgcagagattca
gaaaaacacaccaatcacagattcagacccatcgatgaagctgctcagcaacacaagaag
aaacttcaggaaactctggagcctttaaagaagaagctggagctcaggaagaaagttcag
gaggagtttgatcagacagcagaacacctgaaggtccaggcccgacacacagagaggcag
attatggagcagtttaagcagcttcatcagtttctagcagaggaagaggaggccaggctg
gctgcattgagggaggaagaggagcagaagagagggatgatgaaggagaagatggaggct
ctgagcagagagatagcagctctttcagacacagtcagagccacagaggaggagctgaga
gctgaagacgtctcattcctgcacaactacaaggctgcagtggaaagagtccagcgctgc
cccctgctggaggatccacagctgccctcaggagctctgatagaccaggccaaacatctg
ggcaacctggccttcaacatctggagcaacatggagaacatggtgacctacactcctctg
gttctggacccaaacacggctggcccagaactccatctgtctgaagatctgaccagtttg
tctggaggagaagaacagcagcttcctgataatccagagagatttgattggtggtctgtt
ctgagttctgagggttttaactcagggaatcacagctgggatgttgatgttggagacagt
tcattctgggatcttggtgtgttaaaagagtctgttcagaggaaaggaaggatgtctgga
ttgttgtgcatagagttcaatggatgtagctactcagcatgttctccaccagctcgttcc
actcgtctctctgtccagaagaatctccagaggatcagagtgaatctggactgggacaga
ggaaagctgtccttctctgatctggatactaacacacacatacacaccttcacacacacc
ttcactcacaagatgtttccatatttctacacaaataaaacagtaaagatcctaacaatg
aaaatctcagcgatcaaacatgagctctga
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