KEGG   Xiphophorus maculatus (southern platyfish): 102225435
Entry
102225435         CDS       T02923                                 
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04140  Autophagy - animal
xma04148  Efferocytosis
xma05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xma00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102225435 (vps41)
   04148 Efferocytosis
    102225435 (vps41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102225435 (vps41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xma04131]
    102225435 (vps41)
Membrane trafficking [BR:xma04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    102225435 (vps41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin WD40_CDC20-Fz zf_RING_Vps8_fungal zf_RING_Vps8 Vps39_1 Beta-prop_EML_2 Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_WDHD1_1st TPR_19 TPR_PEP5_VPS11 TPR_7 WD40_Prp19 TPR_17 VPS8_N zf-RING_5 RH_dom zf-rbx1
Other DBs
NCBI-GeneID: 102225435
NCBI-ProteinID: XP_005798603
Ensembl: ENSXMAG00000002050
UniProt: M3ZIN4
LinkDB
Position
21:7428520..7448520
AA seq 854 aa
MAEMEEQERKQSGEFTDESEEEDSEEEPKLKYERLSNGVSEILQSDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNATQKYDVSSVKINQISLDESGENVGICSEDGKVQVFGLYTREGFH
ESFDCPVKVVALHPQFSRSNYKQFVTGGNKLLLYERNWLNRWKTVVLHEGEGTITNVKWR
VNLIAWANNLGVKIYDFSTKQRITNVLRDNASLRPDMYPCSLCWKDDTTLIVGWGTSIKI
CTVKERNPTEMRDLPNRYVEIVSAFETEFFICGLAPLADQLVTLFFVQDPMNQMDEEDRA
RPRLDIIQPLPESCEEISSDALSVRFYQDNECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMAYINHLVENRDYDAAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHDFLKSDYEGFATLI
REWPGELYNNMAIVQAVNDHLKKDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSSIEDKIVLLMEFDKEKAVDMLLDNEDKISIDKVVVELDGRPELLHVYLHK
LFKRDHHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVFLL
SRMGNCKRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIKRIKEGMEIPNLRDSLVKILHDYNLQILLREGCKKILVADSLSLLKKMHRTQM
RGVRVDEGNICESCHSTILPSDMAQPFSVVVFHCRHMFHKECLPSSGTIPGLQFCNICSA
KRRGPGSGILEMKK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcggaaatggaggagcaggaaaggaagcagagtggggaattcacagatgaatctgag
gaggaggacagtgaggaggagcccaagctgaagtacgagaggctctccaacggggtgtct
gaaatcctccagtccgacgcagccagctgtatgaccgtccacgacaagtttcttgcccta
ggaacccatttcggaaaggttttcctgctggacattcaaggaaatgccactcagaaatat
gacgttagttcagtgaagatcaaccagatcagcctggatgaaagcggtgaaaatgtgggc
atctgctctgaggacgggaaggttcaggtgtttggcctctacacaagagagggcttccat
gagagcttcgactgtcctgtcaaagttgttgctttacaccctcagttcagcagatcaaac
tacaagcagtttgtcaccgggggcaacaagttgctcctgtatgaaagaaactggctgaat
cgctggaagacggtggtcctgcatgaaggagagggaacgatcactaacgtgaaatggaga
gtcaacctgatagcctgggccaacaacttgggagtgaaaatctatgactttagcaccaag
cagcggatcaccaatgtgctgcgagataatgcgagtctgcggcccgacatgtatccctgc
agcctgtgctggaaagacgacactactctcatcgtcggctggggaacttccatcaagatt
tgtacagtgaaagagcgaaatcctactgaaatgagggatctgcccaatcgctatgtggaa
atagtgtctgcatttgagacggagttcttcatctgtggtttggcgccgctggcggatcag
ctcgtcaccctgttttttgtgcaggaccccatgaaccagatggatgaagaggatcgtgca
cggcctcgtctcgacatcatccagcctctccccgaaagctgcgaggagatctcctcggat
gctctgagtgttcgcttctaccaggacaacgagtgcagggattaccgcctcgagcattca
gagggagagtcactcttctacatcatcagtcccaaagacatcgttgtggctaaagagcga
gaccaggacgaccacatcgattggctgctggagaagaagaaatatgaggaggcgctgatg
gctgcggagatcagcttcaaaaacatcaagaggcacgatgttcagaaaatagggatggct
tacatcaatcacttagtggagaacagagactatgacgctgctgccagaaaatgtcagaag
gttcttgggaaaaacatggagttgtgggagaatgaggtgtacaggtttaagaccattgga
cagctgaaggctatcagtcaatatctaccgagaggagatctgcgtctaagacctgccatt
tatgaaatgatcttgcacgactttctaaaaagtgattatgagggttttgctacactgatc
cgggaatggcccggagaactttacaacaacatggccattgttcaggccgtcaacgatcac
ctaaagaaggatcccaccaacagcacgctgctcaccacgctggccgaactgtacacttac
gaccagcgctacgacagagccttggaaatctacctgaggctgaggcataaggacgtctat
cagctgatccacaaacacaacctgttctcctccatcgaggacaagattgtcctcctgatg
gagtttgacaaagagaaagctgttgatatgcttctcgacaatgaagacaagatatctata
gacaaggtggtggtggagctagatggaaggcctgagctgctgcatgtgtacctccataaa
ctgttcaagcgggatcaccacaaaggccagaagtaccacgagagacagatcggtctgtat
gcagagtacgaccgaccaaacctcctgccttttctgagagatagcacccactgccctctt
gaaaaggctcttgagatttgtcagcagaggaactttgtagaggagactgtcttcctgctc
agcaggatggggaactgtaaacgagccctccagatgatcatggaggagctggaggatgtg
gacaaagctatagagtttgctaaggagcaggatgacgcagagctgtgggaggatctcata
tcttactctatcgacaagccacctttcatcactggcctcctcaataacatcggcactcac
gtggatcccattctgctcatcaaacgcataaaggaggggatggagatcccaaacctgaga
gactcactggtgaaaattctccacgactacaacctccagattcttcttcgggaaggatgc
aaaaagattcttgtggccgattcgctctccttgctcaagaagatgcatcggacgcagatg
cgaggcgttcgggtcgatgaagggaacatctgtgagtcatgtcacagcaccatactaccc
tcagatatggcccagccgttcagtgtggtggtgtttcactgcagacacatgtttcacaag
gagtgtttaccatcttcaggaactattcctgggttgcagttttgtaacatctgcagtgca
aagaggcgaggacctggaagtgggatacttgagatgaaaaagtaa

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