Xiphophorus maculatus (southern platyfish): 102225454
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Entry
102225454 CDS
T02923
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102225454
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102225454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xma00536
]
102225454
Glycosaminoglycan binding proteins [BR:
xma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102225454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
NDNF
EGF
NDNF_C
fn3_2
hEGF
TSC22
Motif
Other DBs
NCBI-GeneID:
102225454
NCBI-ProteinID:
XP_014325515
Ensembl:
ENSXMAG00000018617
UniProt:
M4AW41
LinkDB
All DBs
Position
8:complement(22691902..22754669)
Genome browser
AA seq
2372 aa
AA seq
DB search
MGAQSLLGCLLLFTLMSLSTAGLVKKVLRHRRQTLSPHTEHNATLPSVGHPMVFSHVYNI
NVPASSLCSVDLEASEGTQVHPKDVTAIPPGHHVTEHTLNGENQIVFTHRINIPRQACGC
TDDFPGLKDLVSRLEMLEGEVSALRDQCSSEQLTGELGTKPYCSGHGNYSAETCGCICDP
GWRGPNCTEAECPGRCQDRGRCVDGKCVCYKGFDGEDCALETCPVLCGAHGHCVGGVCVC
SDGFFGEDCSQSRCLNNCLGRGRCEEGDCVCDEPWTGFDCSELICPKDCYDRGRCVNGTC
HCDEGFSGEDCGEHSCPNNCRGNGFCVDGKCICTAGYSGEDCSQLTCLNDCNGRGMCFNG
LCICDSGYQGEDCSQLACLNNCNNRGQCINGRCSCDVGFHGDDCAELSCPNNCRLKGRCV
NGQCVCDEGFAGEDCSVRICPSNCYGRGECIKGRCVCHVGFVGDDCSQLSCPNNCRNRGR
CVDGQCVCDEGFSGEDCGKKACPNDCLARGHCVDGKCFCQEGYMGDDCSVLACPDNCNNR
GRCVNGRCLCESGYEGESCAELSCINNCHDKGRCVNGQCFCDEGYVGEDCSEVSPPKTLT
VGEVSTETVDLSWNNEMLVTEYLITYVPTSPGGLLMEFTVPGDKTAATVKELEPGIEYLI
SVYAVLSNKRSIPVSARVVTDLPQPEGLRFKSVRETSVEVVWDQLDISFDSWEIYFRNTK
EENGKVVSTLPPSQTDFLQSGLGPGQEYEVSISIVKNNTRGPQTSKTVTTKIDSPGQVEV
KDVTDSSALISWNLPVAPVDRVTMFYMPSSDPSDETTVDVSPPDKQYNTDNLRPDTEYTV
SIISRRGEATSDPVTTTFTTALDPPTDAQAASQTADSITLEWTNSQADVSSYRVKYSPIS
GSAHGEKLFPRGSGHTTQATITGLKPGTEYGVGVTAVKNERESLPATTNAATDLDPPRDF
REVRSTETSLAVAWQKPQAKVGGYRLAYMSRDGQAEQVEIPASESTYMLPNLIPGMSYTL
TLAAERGHRRSKPVSLTASTATFTFYLAASDDREQRTPTGSEGNVTSSVILDPPESQISE
TEAEDERGTLTASSAASDGLDLSWELKTPGASDSVPVWYKDAQISRDGSEVQLPGDSRGA
GVGGPEPTAEYQTELFGIKSSQGPALPEAVAVTAPPDVLALSIKEASTAPEPAEEEESLK
RVDKVHSESPSENDAMVSGAEIESSGMELISGLAVNVTATSVSLAWSAPDDAFDGFLVEM
VAVSAAAAQPQANELPGSFRKAEIEGLLPSTMYEITLQGLMEGRRSVPLRVFTATAGLEP
ALGNLVLSDITWDSFTASWSPTGGDFDSFVIEVINMEDLVERQNLTLSGDASSLVLSGLN
PNTNYMVGLYGMHQGSYLEPLYREATTVIRPVVGKLYVSNLTSESFTIHWNSTDRQFDGF
VLEIIDSDWLMELKEYNISQNVSAHDVTGLRPSTDYIAYLYGTYKGSRTRPVSIVASTAE
EPDLSNLVVSNVTSDRFSLSWRTREKAFDTFVVEVRESALPSQAMGRTLPGDVRATVMAG
LKANTSYDIKLYASKGGRQNTQPLLAVATTEDVPQLGPIVASSANPHYLSLYWNTLSGHF
DGFVVQVSDSEQKCDTLEFRLPSEARNITIPNLMDDTGYDIEVYGISHGRRTPSMFVHAV
TAPLPKVENLTISNVTPYGFRASWEVRQQPPPQQEELSPSGGGFSHFHIVVTDSGWLLEP
QEFTVPGDQSHLDIWGLITGIGYEVKLTGVSESGLLSRPLTTVAVTEAEPEVDQLFVSDI
TADGFRLSWTANEDQFDRFVIKIRDSKRLAHPQEYNVRGSERTKVITGLMSGTEYEFELY
GLTLDQRSQPITGVAQTGLSAPRGLHFTEVTDSTAVVHWSIPRFPVDNYRITYVPFEGGS
PLIVTADGGVSEMVLINMFPGKTYQVTLSSLKGLEESEPSTGTVTTALDSPRGLTVINVT
DTSALLLWQPSVATVDGYVITCSADAVSPVVEHVSGNIVEFQMNTLVPGTLYTVGVYGVK
EAQRSASTVTKFSTDVDPPRDLMAVNVQTDSATLTWQPPTAAVSGYVLTFFSSDGAIREV
MLSPTASSYSMSQLTASTEYSVRLQAISGGQRSRYITTTFSTSKAGQMYARPRDCAQILS
NGETTSGLYTVYIGGEESQPVQVYCDMTTDGGGWLVFLRRQNGKLEFFRNWKSYTAGFGN
MSDEFWLGLSNLQKITSLGHYELRVDLRDNGESAYAQYDKFTLAEPRTRYKVYLGAYSGT
AGDSMSYHQGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDSSHSKGINW
FHWKGHEHSIEFAEMKIRPANFNNLESRKKRS
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcacaaagtcttctgggctgccttcttctgtttactttgatgagtttatcaact
gctgggcttgtcaagaaagtcctccgccatcgacgacagactctttctccccatacagaa
cacaatgccacccttcccagtgtaggccacccaatggttttcagccatgtttataacatc
aacgttcctgcaagttccctgtgctcggtggacctggaggcatcagagggcacacaggtc
catcccaaagacgtaacggcgatccctccaggccatcacgtcaccgaacatacgcttaat
ggggaaaaccagattgtgttcacccatcgcattaacatacctcggcaggcctgcggttgc
accgatgactttccaggcctgaaggacctcgtgagccgcctggagatgcttgaaggagag
gtttcagctttgagggatcaatgcagcagtgagcagctcacaggtgagttgggaacaaaa
ccgtactgcagtggccatgggaactacagcgctgaaacctgtggttgcatatgtgatcct
ggctggaggggacccaactgcactgaggccgagtgtcctgggagatgccaggaccgtggt
cgctgtgtggacggaaaatgtgtgtgctataagggcttcgacggagaagattgtgccctc
gagacctgccctgtgctgtgtggagcccacggccactgtgtgggaggcgtttgtgtctgt
tccgatggtttctttggcgaagactgctctcagagccggtgcttgaacaactgcctgggc
cgcggtcgctgtgaggagggagactgcgtgtgtgacgaaccttggactggctttgactgc
tccgaactcatctgtcccaaagactgctacgaccgcggacgctgtgtgaacggcacctgc
cactgcgatgagggcttcagcggggaggactgcggagaacactcttgccccaacaactgc
cgcggcaatgggttttgtgttgacggcaaatgtatttgcactgctgggtacagtggggaa
gattgctctcagctcacctgcctgaatgactgtaatggcagaggaatgtgcttcaatgga
ctttgcatctgtgactcagggtatcaaggtgaggactgcagccagcttgcgtgtctgaat
aactgcaacaacagaggtcagtgcatcaacggacggtgttcttgtgatgtcgggttccac
ggagacgactgtgccgagctttcctgtccgaacaactgccggctgaaggggcgctgtgtc
aacggccagtgtgtctgtgacgaaggctttgcaggtgaagactgtagcgtgcgcatctgc
ccatcaaactgctacggccgtggggagtgcatcaaaggacgctgcgtgtgccacgtaggc
ttcgtcggcgacgactgcagtcaactgagttgcccgaacaattgcagaaaccgcggtcgt
tgtgtcgatgggcaatgcgtttgcgacgaagggtttagcggggaagactgtggcaagaaa
gcttgtcccaacgactgcctggcacgcggtcactgtgtagacggcaagtgcttctgtcag
gagggttacatgggagatgactgctctgtgctggcttgtccggacaattgcaacaacagg
gggcgttgcgtcaacgggaggtgtttgtgtgagagtggatatgaaggggagagctgtgca
gagctgagctgcatcaacaactgccatgataagggccgctgcgtgaatggccagtgcttc
tgcgatgaggggtatgtcggagaggactgctctgaagtgtctcctcctaagaccctgact
gtcggggaagtcagcaccgagaccgtggacctgtcctggaacaacgagatgctggtcaca
gagtacctcatcacatatgtccccaccagtcccgggggtctcctcatggagttcactgtt
cctggagataaaactgctgccactgttaaagagcttgaacctggcattgaatacctgatc
agcgtctacgcggtcctgagcaacaagaggagcattcctgtcagcgcacgagtggttaca
gatctcccacaaccagaaggcttaagattcaagtcagtgagagaaacctctgtcgaagtt
gtctgggaccagctggacatttcctttgacagctgggagatttatttccgcaacacgaaa
gaagaaaacggaaaagtcgtgagcacccttccgccctcccaaaccgacttcctccagtct
gggctcggaccaggacaggagtatgaagtctccatcagcatcgtaaagaacaacaccaga
gggccccaaacatccaaaactgtcaccaccaagattgacagtcccgggcaagtggaggtg
aaggatgtcacggactcctcggcgctgatcagctggaatctgccggtggctccggtggac
agggtcaccatgttttacatgcccagctccgacccctcagacgaaaccacggtggacgtt
tccccaccagacaaacagtacaacactgacaatctgaggccggacacggagtacaccgtg
tcgatcatctcaaggcgtggagaggcaaccagtgaccctgtcaccaccacgtttactaca
gctctggatccccctacagacgcgcaggctgcgtctcagaccgctgacagcatcactctg
gagtggaccaacagtcaagctgatgtcagcagttatcgggtgaaatacagtcccatctct
ggttccgcgcacggcgagaaactcttcccacgaggatcaggacacaccacacaggctacc
atcactggcctgaagccggggacggagtacggagtgggagtgacagctgtgaagaatgaa
agagaaagcctccctgccactacaaacgcagcaactgacctggacccccccagagacttc
agagaggtccgctccacggagacgtcgctcgccgtcgcctggcagaaaccccaggccaag
gtcggcggctacaggctggcgtacatgtccagagacggccaggcggagcaggtggagatc
ccagcctctgaaagcacctacatgctgcccaacctgattcccggtatgagctacacgctg
acgctggcggcagagcggggacacaggaggagcaaacccgtctccctgacggcgtccaca
gccactttcactttttatttagctgcctcagacgaccgtgaacagaggacccctacaggc
tcggagggcaatgtcactagctctgttattttagacccgccagagtcacagatttccgag
acggaggccgaggatgagcgtggaacgctgaccgcctcgagcgctgcgtccgacggactt
gacctctcttgggagctaaaaactcccggcgcctccgacagcgtccccgtatggtataag
gacgctcagatatcgcgggacgggagcgaggtccagctccctggagattcccgtggggcc
ggagtcggcggcccagagccgacagcagaatatcaaactgagttgtttggaataaagagt
agccagggacctgcactacctgaagctgttgcggttacagcacccccagacgttctcgcg
ctgagcatcaaagaagcctcgacggccccagagcccgccgaagaggaagagagcctcaaa
cgtgtcgacaaggttcacagtgaatcgccttcagaaaacgatgcgatggtttctggggcc
gagatcgaaagctcgggcatggagctgataagcggcctcgcggtcaacgttaccgccaca
agcgtgagcctggcgtggtcggcgcccgacgacgcgttcgacggctttttggtggagatg
gttgccgtgtcggctgcagcggcgcagcctcaagcgaacgaattgcccgggagttttagg
aaggccgaaatagaggggctgttgccctcgacgatgtatgaaataacactgcaagggctg
atggaagggaggcgatctgtaccgctcagagtttttactgcaacagcggggctggagcca
gcactagggaacctcgtcctgtctgacattacatgggacagcttcacagcatcctggagc
cccacagggggagactttgacagctttgtcatcgaggtaataaacatggaggatctcgta
gagagacagaacctcactctgtccggagacgcgtcgagcctggtcctctccggattgaat
cccaataccaactacatggttggcttgtacgggatgcatcagggctcctacctcgagccc
ctgtaccgtgaagccacaacagttattagaccagtggttggcaaactgtatgtctcaaac
ttaacgtccgaaagctttacgatccattggaacagcactgacaggcagtttgatggtttt
gttctggagataattgactcagactggctcatggagctgaaggagtacaacatttctcaa
aatgtatcggcccatgatgtcacagggctcaggcccagcactgattacatagcctacctc
tatgggacgtacaagggatctcgaacacgacctgtcagtattgttgcatcaacagctgag
gagcctgatttgtccaatctagttgtttccaacgttacctcagacagattctctctgtca
tggcgaacgagagagaaggcctttgatacgtttgtagtcgaagtcagagagtctgctttg
ccgtcgcaggcgatggggcgcactctgcccggagatgttcgcgccacggtaatggcgggg
ctcaaagcgaacacgagctacgatataaagctttacgccagtaaaggcggcaggcagaac
acacagcctctcctggctgtagctactacagaggacgtcccgcagttggggccgatagtt
gcttcgtctgctaacccccattacctcagcttgtactggaacacattgtctggccacttt
gatggctttgttgtccaggttagtgactcggagcagaagtgtgacacgttggagttcagg
ctgcccagtgaagcccgtaacattacaatccctaacctgatggatgacacgggctatgat
atcgaagtgtatggtatttctcatggccgtcgcactccgtctatgttcgtccatgctgtc
acagctcctttacctaaagtggaaaacttgaccatatccaacgtaaccccctacggtttc
agagcatcctgggaagtgaggcagcagccaccgccgcagcaggaggagttatccccctct
ggtggcggttttagccactttcacatagtggtgacagactcaggctggctgctggagcct
caggagttcaccgtgccaggagaccagagtcacctggacatctggggcctcatcaccggc
attggctatgaggtcaagctaaccggcgtgtctgagtcggggcttctctctcggcccctg
actacggtggctgtgacagaggcagagccggaagtggatcagctcttcgtttcggacatc
acggccgacggcttccgcctgtcgtggacggccaacgaagaccagtttgacagatttgtg
atcaaaataagagacagtaaaagattagctcatccgcaggagtacaacgtccgcggcagt
gagcgaacaaaggtcataactgggctcatgagtggcactgagtatgagtttgagctctac
ggcctcacgttggaccagcgatcccagcctataacgggggttgctcagacaggtctgagt
gcgccgagaggactgcatttcaccgaggtgacggactccacggctgtagttcactggtcc
attccacgttttccggtggataactacaggatcacctacgtgccctttgaaggaggaagc
ccattgatcgtgacggcggacggcggcgtgtctgagatggtgctgatcaatatgtttccc
ggaaagacgtaccaagtgacgctgagttccctgaagggtctggaggagagtgagcccagc
accggcacggttaccacagctttggacagtccgcgaggtctgactgtcatcaacgtcacg
gacacgtcggctctgctgctgtggcagccatctgtagccactgtcgacggctacgtcatc
acctgcagcgccgacgcagtgtccccagtggtggagcatgtttctgggaacatagtggag
ttccagatgaacacattggttccaggaactctctacacggttggggtttatggtgtgaaa
gaagctcagaggagtgcgtccactgttactaaattctccacggacgtggatcctcctcgc
gacctgatggctgttaacgttcaaacggacagcgccactctgacatggcaaccccctacc
gctgccgtctctggctatgtgctaaccttcttctcttctgatggtgcaatcagagaggta
atgctaagcccgacagcgtcgtcttacagcatgtctcagctcactgcctcaacagagtac
agtgtccgccttcaggccatctccggaggtcagaggagtcgctacataaccaccaccttt
tccaccagtaaagctggacagatgtacgctcgcccccgggactgcgctcagattctgtca
aatggggagaccacctctggtctgtacaccgtctacataggaggagaggagagccagccc
gttcaggtttactgtgacatgaccacagatggcggaggatggttggttttcctcaggcgc
cagaacggaaagctggaattcttcaggaactggaagagctacacagctggcttcgggaac
atgagtgatgagttctggctgggtctctccaacctccagaaaatcacatctctgggacat
tacgagctgagggtggacttgcgagacaacggagagtcggcctacgcgcagtatgacaag
ttcacgcttgccgagccgagaacacgatacaaagtctacttaggagcttatagtggaaca
gcaggcgactccatgtcctaccatcagggccggcccttctccacctacgacaacgataac
gacatcgctgtgaccaactgcgccttgtcctacaaaggtgccttctggtataaaaactgc
catcgtgtaaacctcatggggaaatacggtgacagcagtcacagtaaggggataaactgg
ttccactggaagggccacgaacactcgatcgaatttgcagaaatgaagattaggccagcc
aacttcaataacctggagagcagaaaaaagcgatcgtaa
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integrated database retrieval system
