Xiphophorus maculatus (southern platyfish): 102225466
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Entry
102225466 CDS
T02923
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102225466
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102225466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
Laminin_II
BRE1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
102225466
NCBI-ProteinID:
XP_023187803
Ensembl:
ENSXMAG00000016442
LinkDB
All DBs
Position
1:complement(4051132..4100216)
Genome browser
AA seq
1797 aa
AA seq
DB search
MQAALLMLLCGLTATVGQEPDQAHGCAQGSCYPATGDLLVGREKNLKASSTCGMRKKERY
CIVSHLQDEKKCFECDSRRPYDPVYNTINHRIENVITTFKPHRKKSWWQSENGKSNVFIE
LDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQIYRYFAHDCAVFFPGVSTGPLQN
INDVICESRYSDLEPSTEGEVIYRVLDPAIKIEDPYSPNIQNQLKITNLRLNFTKLHTLG
DTLVDNRAEIREKYYYAIYELVVRGNCFCYGHASECAPIEGIRDDIEGMVHGRCVCNHNT
KGLNCEQCGDFYNDQPWRPAEGRNTHACKKCDCSDHSDKCHFDMAVYLATGNTSGGVCDD
CQHNTMGRNCEICKPFFYKDPTRHIRDSRVCIACDCDPDGSENGGLCDSHTDPSLGMVGG
QCRCKPNVEGPRCDKCKTNFFGLSANNPVGCQPCRCDSRGTVLGSSMCDPFSGDCICKRL
VIGRFCDQCLSEHWGLSHDLNGCRGCECDIGGALDNQCSIDSGQCRCRSHITGRDCMKVE
SGYFFMALDHFIYEAEFAQMGQGCTLETREHQPGRPAQWTDIGFAQVPQGGTLEFLLNNI
PYSMEYDLVIRYESQMPRDWEEVQITVIRPGSIPTSSPCGNTIPDDDRLTIPLPAGARFV
VLPQPVCLERGVTYSLRLEFTRYQDANSILNGADYAVILIDSIVLMPRHSSMEMFNTGDL
ASNVRRQTFERYRCHEGARSVIRPQISDTCAKLISSMSAVINDGALACNCDPQGSISSLC
DPRGGQCRCRSNIIGRRCDKCAPGTYGFGPSGCIPCECSLDGSVTRLCDKYTGQCQCRPG
AFGQRCDGCQVGHWGFPSCRPCHCNGHANHCDQRSGVCINCRDNTGGDSCDRCANGYYGN
PVLGISSGGQCRPCPCPDGPHSGRHFATSCYQDNRNRQIICNCNQGYTGIVKRSGATVFK
RARCEECAPGYYGNPSQPGGRCQPCQCNNNIDMSDMDACDRRTGECRKCLYNTEGPNCGI
CRSGYFGDASRRNCRKCICNFLGTERSQCMEREDCVCQRATGQCQCLANVVGLSCDHCAP
NHWNLASGNGCEACNCDPNNSVTSSCNEFTGQCQCREGFGGKTCTECEENFWGDPRTLCR
ACDCDWRGIETSQCNRATGHCVCRQGVSGVRCDQCARGFAGQFPNCQPCHQCFGDWDRIV
QDLAVRTKTLAERANEIQSTGLIGPYEKTFKDLEAKLAQAQAIVNARNATTAAVATLMAL
IEDLRAQIGETTEALNHVEGDLTIIQDRNSDASKELNTLEREARELNLTSEQLKHQLDIL
KNSNFLGAYDSIRSSYNMSRDAERRANQSTTTKPSTVSQSADTRRRTERLIAAKKDDFSR
KNSANKRALGELKARAQGLDMKTLNEKICGSLDDVPCTENPCGGAGCRDDEGNRHCGGLN
CNGAVAAADNALERGKHAEKELNKAMGEMQELFTKVKEAKAKAEEAKGKAQAALDKAKAT
KNKVEHSNNNLRDLIKQIRDFLTQEGADPDSIEAVANHVLQLSIPASPLQIRQLADEIKD
RVRSLSNVDAILQQTQDDVQKAEKLLLDAKRARHRAEGLKNTAETVKQALVDAKTAQTSA
EKAIASARADIRDTENRLAEIETETSNSEKNLDDAMRRLGTLEQEINELKTKRARNSMAA
ARAEETATMARDKANEAKQILDGQLTDKFNEVQQRVDTKAKVVRDAKKKAESLREEAKEL
LNDAQNKLQKLAELEKNYEENQRKLEGKVRQLDGLEDKMRSILNDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgcgctgttaatgctcctctgcggcctgactgccacagttggccaggaacca
gaccaagcccatggctgtgcccaaggcagctgttatccagcaactggggacttgttggtt
ggaagggaaaaaaacttgaaggcttcgtccacttgtggcatgagaaagaaagagcggtat
tgcatcgtcagtcacctgcaggatgagaagaaatgttttgagtgtgactccagacgacca
tacgacccagtctacaacaccattaatcaccggatagagaatgttatcaccaccttcaaa
ccacatcggaaaaagtcctggtggcagtcagagaacggaaagtcaaatgtttttattgag
ctggatcttgaggcagagtttcattttactcatctgattatgacatttaagactttccgc
cctgctgccatgcttattgagcgatcagcagattttggtcgaacctggcagatctatcgc
tactttgctcatgactgtgctgtttttttccctggagtctctacgggtcctttgcaaaac
atcaacgatgtgatctgtgaatcccgttactctgacctggagccatcgacagagggcgag
gtcatctacagagtcttggatccagctatcaagattgaggacccatacagccccaacatt
cagaaccaactgaagatcaccaacttaagactgaacttcaccaaacttcacacacttgga
gacaccctggtggacaacagagctgaaattagggagaaatactactacgccatatacgaa
cttgttgtacgtggaaactgcttttgctatggccacgcctctgagtgtgcacccattgaa
ggcatcagggacgacatagaaggaatggttcatggcagatgtgtgtgtaaccataacaca
aaaggtttgaactgtgagcaatgcggtgacttctacaatgaccagccttggaggccagct
gaaggccgcaacacacacgcttgcaagaagtgtgattgcagcgaccattcagataagtgt
cactttgacatggcggtctatttggccacgggaaacacgagtggaggggtgtgtgatgac
tgccagcacaacacaatgggcagaaattgtgagatctgtaaaccattcttctacaaagat
cccacaaggcacataagagactcccgtgtttgcatagcttgtgattgtgacccagatggc
tcagagaatggaggattgtgtgacagccacactgacccgtcgctcggcatggtgggaggc
cagtgccgttgcaagcctaacgtagaagggccacgctgcgacaagtgcaagaccaacttc
tttggcctgagtgccaacaaccctgtggggtgccaaccttgtcgatgtgactccagagga
accgtgttgggcagctccatgtgtgacccattcagtggagactgcatctgcaagcgactt
gtcattggacgcttctgtgaccagtgtctatccgaacactgggggctgagccacgacctg
aacggatgtagaggttgcgaatgtgatattggaggggcactcgacaaccaatgctccatt
gatagtggtcagtgtcgctgccgcagtcacataacgggacgcgattgcatgaaggtggag
tctggatatttttttatggctctggatcacttcatttatgaggctgagtttgctcaaatg
gggcagggttgcaccttagagaccagggaacatcagcccggacgccccgctcagtggaca
gatatcggcttcgctcaggtccctcaaggcggcactttggagtttctgttaaataacata
ccttactctatggaatatgatttagtcatccgctacgaatcccagatgccccgggactgg
gaggaggtgcagataaccgtgatccgtccaggttccattcccaccagcagcccttgtggg
aacaccatcccagatgatgacagactcaccatccctctgccagccggagccaggtttgtg
gttcttcctcagccagtgtgtttggagagaggtgtgacatactccctccgcttggagttc
acacgttatcaagatgctaacagtatcctcaacggagcagactacgctgtcatcctcata
gactctattgtgctgatgccgcgtcactcctccatggagatgttcaacactggggatctt
gcctcaaacgtcaggaggcagacctttgagcggtaccggtgccacgagggagcaaggagt
gtgatccgcccacagatcagtgatacctgtgctaaactcatcagcagcatgtcagccgtt
attaatgatggagccctggcttgcaactgtgaccctcaggggtccatcagctccctttgt
gatccccgtgggggccagtgtcgctgcaggtccaacatcattggtcggcgctgtgacaag
tgtgcaccaggaacctacggcttcggaccctcaggctgcataccatgcgagtgcagctta
gacgggtcggtaactcgactctgtgacaagtacactgggcagtgccagtgccgtcccggg
gcgtttggtcagagatgcgacgggtgtcaggtgggtcattggggctttcccagctgccga
ccctgccactgtaacggacatgccaaccactgtgaccagagaagcggagtctgcatcaac
tgcagggataacaccggcggggacagttgtgacaggtgtgccaatggttattatgggaac
ccagttttgggtatatcatctggtggccagtgtcgcccgtgcccatgtccagatggaccc
cacagtggacgccactttgccacatcttgttaccaggacaaccgcaatcgacaaattatc
tgcaactgtaaccaaggttacacagggattgttaaacgctccggggcgaccgtttttaag
cgcgcccggtgtgaagaatgcgccccaggttactacggcaacccctctcagccgggaggg
cgctgccagccatgccagtgcaacaataacatagacatgtcagacatggacgcatgcgac
aggcggacgggggagtgcaggaagtgcctttacaacacagagggtcccaactgtggcatc
tgcaggagcggatactttggagatgcatcccgacgcaactgcaggaagtgtatatgcaac
tttttgggcacggagcgcagccagtgcatggagcgtgaagactgtgtgtgccagcgtgcc
acgggccagtgtcagtgtctggcaaatgtggtaggtctgtcgtgcgaccactgcgccccc
aaccactggaacctggccagtgggaatggctgtgaagcatgcaactgtgatcccaacaac
tctgtcacatcctcctgcaatgaatttacagggcagtgtcaatgccgagaggggtttgga
ggaaagacctgcacagaatgtgaggagaacttctggggagacccccggacgctgtgcaga
gcgtgcgactgtgactggcgtgggattgagacatctcagtgcaaccgcgcgaccggccac
tgcgtctgccggcagggggtgtcgggcgtccgctgcgaccagtgtgccagaggctttgcc
ggccagtttccgaactgccagccctgtcaccagtgcttcggggactgggatcggatagta
caggacctggcagtacgcaccaagactcttgcagagcgagccaatgagattcaaagcact
gggcttatcggaccttatgagaaaaccttcaaagacctggaggcgaagctggctcaagct
caggccatcgtcaacgcaagaaatgccacgactgcagctgtggctactctgatggctctt
attgaggatctcagggcacaaattggtgagacaaccgaagccctaaaccacgtggaggga
gatttaacaatcatccaggaccgaaactctgacgcaagcaaggagctgaacactctggag
cgggaggctcgagaactgaacctcacatctgagcagctaaaacatcaactggatattctg
aaaaactctaacttcttaggagcgtatgacagcatccgcagctcctacaacatgtctcga
gatgctgagcgacgggccaaccagtcgaccaccaccaagcctagcacggtcagtcagtcg
gcagacactcgccgccgcaccgagcgcctcattgccgcgaagaaggacgacttcagtcgg
aagaactcagcaaacaagcgagcgctgggggagctgaaggcccgagcccagggtctggac
atgaaaacgctcaatgagaagatttgtggttctctagacgacgttccctgcacggagaac
ccctgtggaggagctggttgccgggatgacgaagggaaccgtcactgcggaggcctgaac
tgcaacggagccgtggctgcagctgacaatgctttggagcgaggcaaacatgcagagaag
gagctgaacaaagccatgggggagatgcaggaactcttcaccaaggtaaaagaagctaag
gccaaggcagaggaggctaagggtaaagcccaagctgctctggataaagccaaggccaca
aagaacaaagtagagcactccaacaacaacctcagagacctgatcaaacagatcagggac
ttcctcactcaggagggagccgatccagacagcatcgaggcggtggcgaaccacgtcctg
cagctctccatccccgcttcaccgctacagatcagacaactcgccgacgagatcaaggac
cgcgtccgcagcctgtccaacgtggacgccatcctgcagcagacgcaggatgacgttcaa
aaggcagagaaactgctgctggacgccaagagggcaaggcatcgtgctgagggcttgaaa
aacacagcggagacggtgaagcaggccttggtggatgctaagacagcccagacttcagct
gagaaagccatagcgagtgccagggcagacatcagagacactgagaatcgactggctgag
attgagacagaaacctccaacagtgagaagaacctggatgatgcaatgcgtcgcctcggc
acacttgaacaggagatcaatgagctgaagaccaagcgagccagaaacagcatggcggca
gcccgagctgaagagacggccaccatggctcgggacaaggcaaatgaagccaagcagatt
ctagacggccagctgacagacaaattcaacgaggtgcaacaacgagtggacaccaaggcc
aaggtcgtgcgggacgccaagaagaaggcagagagtctccgagaggaagccaaggagctc
ctcaatgatgctcagaataagctacagaaactagcagagctggagaaaaactatgaggag
aaccagaggaagctggaggggaaggtccggcagctggacgggttggaggacaagatgagg
agcatcctcaacgacataaacaaacagatccagatctacaacacgtgccagtaa
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integrated database retrieval system
