Xiphophorus maculatus (southern platyfish): 102225470
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Entry
102225470 CDS
T02923
Name
(RefSeq) ras-related protein Rab-40B-like isoform X2
KO
K07928
Ras-related protein Rab-40
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102225470
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xma04031
]
102225470
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
102225470
GTP-binding proteins [BR:
xma04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
102225470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
102225470
NCBI-ProteinID:
XP_005806773
Ensembl:
ENSXMAG00000016902
LinkDB
All DBs
Position
10:17688138..17701467
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AA seq
291 aa
AA seq
DB search
MSHRTRTSPIRAYDFLLKFLLVGDSDVGKGEILESLQDGASESPYGYNLGIDYKTTTILL
DGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPG
VPKILVGNRLHLAYKRQVTTEQAQVYAEKLGVTFFEVSPLCNFNITESFTELARIVLMRH
GMERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPLTLKSHLKSFSMANGLNARMMHG
RSYSVTAAAAAAAHHSAAKRSGGTLLKKPKLIRPPPLSPTTQGCRNSCKIS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagccacagaaccagaaccagcccgatccgagcctacgacttcctgctgaagttccta
ctggtgggagacagcgacgtggggaagggggagatcctggagagcctgcaggacggagcg
tccgagtccccgtacgggtacaacctgggaatcgactacaagacgacgaccattctcctg
gacgggaggcgagtcaagctgcagctctgggacacatccggacagggtcggttctgcacc
atattcagatcctactccagaggagcgcagggagtaatcctggtgtacgacatcaccaac
cgctggtccttcgacgggatcgacaggtggatcaaagaaatcgacgagcatgcgccggga
gtgcccaagatcctggtcgggaaccgcctccacctcgcctacaagcgtcaggtgactacg
gagcaggcgcaggtgtacgccgagaagctgggcgtcactttctttgaggtgagcccgctc
tgcaacttcaacatcaccgagtcgttcacagagctcgcccgcatcgtcctcatgaggcac
ggcatggagcgcctgtggaggcccaacaaagtgctgagtcttcaggacctctgctgccgc
tccattgtctcctgcacgcctgtccaccttgtggacaagctgcccctgcccctcaccctc
aagtcccacctcaagtccttttccatggccaacggtctcaacgctcgcatgatgcacgga
cgctcctactccgtcaccgccgccgccgccgccgccgctcaccacagcgctgccaagagg
agtggagggacgcttcttaaaaagccaaaactgatccgaccaccgccgctcagcccgaca
acgcagggctgcagaaacagctgcaaaatatcctaa
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