Xiphophorus maculatus (southern platyfish): 102225498
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Entry
102225498 CDS
T02923
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102225498 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102225498 (cstf3)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102225498 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
Motif
Other DBs
NCBI-GeneID:
102225498
NCBI-ProteinID:
XP_023187976
Ensembl:
ENSXMAG00000009545
UniProt:
M4A540
LinkDB
All DBs
Position
4:complement(14311215..14331086)
Genome browser
AA seq
716 aa
AA seq
DB search
MSTEGTAEQTAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTHERLVS
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLAYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFAFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRAIFKKAREDLRTRHHVYVSAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSTS
ELKALGYKDVSRAKLAAMLPEAVVAPSVPTLKDDPDRKPEYPKPDTNQMIPYQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPESVDAAVELIT
GRQPEAAGEGNGPMENHATAKSLKRPNADSDEEDDKGAIAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggagggaacagccgagcagacagcagctgagtatattcctgagaaggtgaag
aaagcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaatcaacccatagataaagcaaggaagacccatgagcgacttgtctca
cagttcccgagttctggcagattctggaaactgttcattgaagccgagataaaggctaaa
aactatgacaaggtagagaagctgtttcagagatgcctaatgaaagtgttgcacattgac
ttgtggaaatgctaccttgcatatgttcgagagaccaaagggaagcttcccagctacaaa
gagaagatggcccaggcgtatgatttcgcccttgataaaattgggatggaaattatgtcc
tatcagatttgggtcgactacataaatttcctaaaaggagttgaggcagtgggctcgtac
gcagaaaatcaaagaatcactgcggttcggagagtctaccaaagaggttgcgtgaaccca
atgataaacattgaacagctctggagagattatagcaaatatgaagagggtatcaatgtg
catttggctaaaaagatgattgaagatcgcagcagggattacatgaatgcaaggagagtg
gcaaaggagtatgagacagtaatgaaagggcttgacagaaacgcaccttcagttccacca
cagaactcccctcaggaggcccagcaagtggaaatgtggaaaaagtacattcagtgggaa
aaaagcaacccactccgcacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctgctggttctgggccaccatcccgacatttggtacgaggcagctcag
tacctggagcagtccagcaagctactggcagagaaaggagacatgaataattcaaagctg
ttcagcgacgaggcagctaacatctatgaacgtgccattgggactctcctcaaaaagaac
atgctcctctactttgcgtttgctgattacgaagaaagtcgcatgaagtacgagaaagtg
cacagcatctacaacaaactgcttgcgattgaggacatcgaccccacgctggtctacatc
cagtacatgaagttcgccaggagggcagagggcatcaaatcaggtcgcgccatcttcaaa
aaggctcgagaggacctacgcacgcgtcaccacgtctacgtgtctgcagctctgatggaa
tactactgcagcaaagataaatcagtggcctttaagatttttgagctgggtttgaagaag
tatggagacattccagagtacatacttgcctacattgattacctctcccaccttaatgag
gataacaacactagggttttgttcgaacgggtcctcacctctggaagcctatccccagag
aaatcaggtgagatctgggctcggttcttggcgttcgagagcaacatcggagacctggcc
agtattctgaaagtagagcgccgacgtttcacagccttcaaagacgagtatgaggggaaa
gaaacggctttgcttgtagatagatacaagttcatggacctttatccctgctctaccagt
gaactcaaagcccttggttacaaggatgtgtctcgtgccaaactggcagcaatgctccct
gaagctgtggtggctccctctgtgcctacactaaaggacgatcctgatcgtaaaccagag
tatcccaaaccagacaccaatcagatgatcccgtatcagccacgtcacctcgctcctcca
ggtctacacccggtccctggtggagttttcccagtccctccagctgctgttgtcctaatg
aagctgctccctccacctacgtgtttcactggtccctttgttcaagtggatgagctcatg
gaaacttttaggagatgtactcttcctgagagtgttgatgctgctgtggagctcatcacc
ggcagacagcctgaggcggcaggggagggcaacggccccatggagaaccacgctaccgcc
aagtccctcaagaggccaaacgccgactccgatgaggaggacgacaagggagccatagct
ccacccattcacgacatctaccgcgcgcgccagcagaagaggattcgataa
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integrated database retrieval system
