Xiphophorus maculatus (southern platyfish): 102225617
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Entry
102225617 CDS
T02923
Name
(RefSeq) cadherin-4-like isoform X2
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102225617
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102225617
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Major cadherins
102225617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Pox_A30L_A26L
Stevor
Motif
Other DBs
NCBI-GeneID:
102225617
NCBI-ProteinID:
XP_005800693
Ensembl:
ENSXMAG00000009921
LinkDB
All DBs
Position
20:complement(26779354..27081299)
Genome browser
AA seq
925 aa
AA seq
DB search
MIAGCILLACTVLVGASSGSRAGQPLKPPCRPGFSQNFYTVIVPRDLLHGQSILKDTTLS
SKRVKFEDCQHSREVGFVSSDPNFSVRPDGSLYTEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHLHPLPLTKIGFEEMLSRVWESQPRVIKFSRRHQRGSSANSLRRQKRDWV
IPPINVPENGRGPFPNMLVRIRSDQDRDPGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGIKP
GSSVMQVTATDSDDSTTANGMVRYRILSQTPHSPIPNMFAINMETGDISTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVGTFSGEVPENKVNVVVTN
LTVVDRDQPHTPNWNAVYRIVNGDPLGHFTVRTNPITNEGMLTVVKPVDFEMNRAFMLTV
VVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKTIRFEEGVPAGTTLTVFAAQ
DPDHFIHQIVRYSKLSDPANWLRINRTNGQITTMALLDRESMYVKNNMYEATFLAYDNGS
PQASGTGTLQIYLIDVNDNAPVLIPKEAQICERARPNSRINITASDADAEPNVGPFVFEL
PSFPASIRRNWTISRLSGDYAQLRLKIPYLEAGVYVIPVIVSDSGNPPLSNRSMIRIKVC
PCDNNGDCSATGAVAAAGLGTGAIIAILMCIIILLSMVLLFVVWMKRREKERQAKPLLID
PEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIISKPTGVRRVDERPVIAESQYP
VRPSVPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSSGDQ
DYDYLNDWGPRFKKLADLYGGGADD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctggctgcatcctgttggcgtgcaccgtactcgtgggcgcatcctcggggagc
agggcgggccagcccctgaagcctccctgcagacccggcttctctcagaacttctacacg
gtgattgtccccagagacttactacacggccagagcatcctcaaagataccaccctgtcc
agcaagcgtgtgaagtttgaggattgccaacacagcagagaggtgggctttgtcagcagc
gaccccaacttcagcgtgaggcccgatgggagtttgtacacggaacaggaggtggccaac
ctctccgagcccgtccagttcatggtgacggcgcggggactgcacgacccgcacatctgg
gagaccaccgtgaagctggccctcgccggacatcttcaccctctaccgctaacaaagatc
ggctttgaagaaatgctgtcacgggtgtgggagtcccaacccagggttatcaagttctct
cgaagacatcagagaggttcctctgcgaacagcttgaggcggcagaagagagactgggtc
atcccacctatcaacgttcctgaaaacggccgaggacctttcccaaacatgcttgtcagg
atccgctcggatcaggatagggaccccggcatccgctacagcatcacgggcgccggcgcc
gatcagcctccgagcggaatctacaacatagaccccatcagcggcaacatgttcgtcacc
cagcccctggaccgcgaggagagagcctccttccacctgcgagcccacgcggtggacatg
aacgggaaccaggtggagaacccgatagacctgtacatctacgtgatcgacatgaacgac
aacaggcccgagtttcaaaaccaggtttacaacggctcagtggctgaagggatcaaacca
ggctcatctgtgatgcaagtgacggccacggattcggacgactccaccacggccaacggc
atggtgcgctaccggatcctctcgcagaccccccacagtcccatccccaacatgtttgcc
atcaacatggaaacgggagacatcagtactgtggccgccggactggacagggagaaagtg
tcgcagtacaccattatcgtccaggccacggacatggagggcaatctgaactttgggctc
tccaacacggccacggcgctcatatccatcactgacatcaacgacaacccaccagaactg
accgtcgggacgttttccggtgaggtgccggagaacaaggtgaacgtcgtggtaaccaac
ctgactgtggtggaccgggatcagccccacacccccaactggaacgctgtctatcgaatc
gtcaacggcgacccgttaggacacttcaccgtccgcacaaatcccatcacgaatgaggga
atgctcacggtggtcaagccggtggatttcgagatgaaccgcgccttcatgctgacggtg
gtggtgtccaatcaggcccacctggcgagcggcatccagtcctcgcttcagtccacggcg
ggggtcaccatctctgtccaggatgtcaacgagccgcccgtcttccccgtcaaccccaag
acgatccgtttcgaggagggcgtgccggcggggaccacgctcacggtgttcgcagctcag
gaccccgaccacttcatccaccagatcgtcaggtactcgaaactctccgacccggctaac
tggctgaggatcaacagaaccaacggtcagattaccaccatggccttgctggacagggag
tccatgtacgtcaaaaacaacatgtatgaagccacgttcttggcgtacgacaatggttcg
ccccaggccagcgggactgggacgctccagatctacctgattgacgtcaacgacaacgct
cccgtgctgatacccaaggaggcgcaaatctgcgagcgagcccggcccaactccagaatc
aacatcacggcttcggacgccgacgctgagcccaacgtcgggccgtttgtcttcgagctg
ccttcgtttcctgccagcatccgccggaactggaccatctccagactgagcggcgactac
gctcagctcagactgaagattccttacctggaggcaggcgtctacgtgatcccggtcata
gtgtctgactcagggaacccgcctctgtccaaccgctccatgatcaggatcaaagtgtgt
ccctgtgacaacaatggggactgcagtgccacgggggccgtggcggccgctggcctcggc
accggagccatcatcgctatcctcatgtgcatcatcatactgctgagtatggtactgctg
ttcgtggtgtggatgaagcgcagagagaaagagcggcaagcgaagcccctgctgatcgac
ccagaggacgacgtcagagacaacatcctgaagtatgatgaagagggaggtggagaggaa
gaccaggactacgacctgagccagctgcagcagccggagtctctggaccacatcatcagc
aagccaacgggggtgcgccgggtcgatgagaggcccgtgattgctgagtcgcagtaccct
gtcagacccagcgtgccccacccgggggacataggagacttcataaacgacggtctgagg
gctgcagacaacgaccccaccgccccaccgtacgactccctgctggtgttcgactatgag
ggtagcggttcgaccgccggctccgtcagctcgctcaactccaccagctcaggagaccag
gactacgactacctcaacgactggggtccgcgcttcaagaagctggcagatctctacggg
ggaggagcggacgactga
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