Xiphophorus maculatus (southern platyfish): 102225621
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Entry
102225621 CDS
T02923
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03030
DNA replication
xma03410
Base excision repair
xma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102225621 (pole2)
03410 Base excision repair
102225621 (pole2)
03420 Nucleotide excision repair
102225621 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xma03032
]
102225621 (pole2)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102225621 (pole2)
Enzymes [BR:
xma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102225621 (pole2)
DNA replication proteins [BR:
xma03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102225621 (pole2)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102225621 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
102225621
NCBI-ProteinID:
XP_005801350
Ensembl:
ENSXMAG00000008186
UniProt:
M4A173
LinkDB
All DBs
Position
19:1543134..1549514
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AA seq
528 aa
AA seq
DB search
MDVSHKIKTKVSTGFKMRGLILRPEASRYLVEVLESVDSSELDDVVEKVLDAVEKQPLTS
NMIELSVVESAVQDCTQAGDDTIDNMFNIIGAFDVPRYIYSVERKKFVPISMTSHPAPGL
CGLARDKAELFRERYTILQQRTHRHELFTPPAIGAAVVEGQNKFQLRTIEALLGSTAKLG
EVIVLGMITQLKEGKFYLEDPSGTVQLDMSKAQFHNGLYTESCFVLAEGWYEDLVFHVNG
FGFPPTEPSSATRAYYGNINFFGGPSSTSVKASSKLKQLEEENEDAMFVIVSDVWLDSVE
VMEKLNVMFSGYAALPPTCFIFCGNFSSAPYGKTQIKSLRESLKTLADIICSYPSIHSSS
RFVFVPGPEDPGPGTILPRPPLADHITQDFQQRVPGSVFTTNPCRIQYCSQEIVIMREDL
VNKMCRNCVRLPNSNLDIPNHFVKTVLSQGHLTPLPLYVSPVFWAYDYSLRVYPVPDVIV
FADKYDPFSISSTDCLCLNPGSFPRSGFTFKVYYPSNRTVEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttctcacaaaataaagacgaaggtttccaccgggttcaagatgagaggcctt
attcttcgacctgaagccagcaggtatctggtggaggttctggagtcggtggattcctct
gaactggatgatgttgttgaaaaggttctggacgcagtggagaagcagccattgacctct
aacatgatcgagctgtctgtggtggaaagcgccgttcaggactgcactcaggccggggat
gacaccatagacaacatgttcaacatcatcggagcttttgacgttcccagatacatttac
agtgtggagaggaagaaatttgtaccgatcagcatgacgagccacccggcgcccggtctg
tgcggtttggccagagataaagctgagctcttcagggagcgctacaccatcttacagcag
cgtacgcatcgccatgagctgttcacgccgccggccatcggagctgctgtggtggaaggt
caaaacaagtttcagctgaggacgattgaagcgttgctcggcagcacagctaaactggga
gaggtgattgtactgggaatgatcacacagctgaaagagggtaaattttacctggaggac
ccgagtgggacagtacagctggacatgtccaaagcacagtttcataatggtctgtacaca
gagtcctgctttgtgctggcagaaggttggtacgaagacttggtgttccacgttaacggc
tttggattccccccaacagagccttcgtctgctacaagggcgtactacggcaacataaac
ttcttcggcggtccgtcctccacctcggttaaagcttcgtccaagctgaagcagctggag
gaggagaacgaagacgccatgtttgtgatcgtctctgacgtctggctggacagcgtggaa
gtgatggagaagctcaacgtcatgttctcaggatatgctgctctgcctccaacctgcttc
atcttttgtggaaacttttcttctgctccttatggaaaaactcagattaaatccctcaga
gaatcattaaagaccctggctgatatcatctgttcgtatcccagcattcatagcagcagt
cgctttgtgtttgttcctggcccggaggaccccggccccggcaccatcctgcccaggccg
ccgctggcagatcacatcacacaggacttccagcagagggtccctggctccgtgtttaca
accaacccatgcaggattcaatactgcagccaagagatcgtcatcatgcgagaagatctg
gtcaacaagatgtgcaggaactgcgtccggctgcccaacagtaacctcgatatcccaaat
cattttgtgaagaccgtcctgtcgcagggccacctgactcctcttcctctctacgtcagt
ccggttttctgggcctatgactactccctgcgggtctaccccgtgcccgacgtcatcgtg
tttgcagacaagtacgacccgttctccatctccagcaccgactgcctgtgtctcaacccg
ggctcgtttcctagaagcggtttcacgttcaaggtgtactacccatccaacagaactgtt
gaagacagcaaacttcaaggactttaa
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