Xiphophorus maculatus (southern platyfish): 102225645
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Entry
102225645 CDS
T02923
Symbol
mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04120
Ubiquitin mediated proteolysis
xma04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102225645 (mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102225645 (mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102225645 (mgrn1)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102225645 (mgrn1)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102225645 (mgrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
102225645
NCBI-ProteinID:
XP_005809092
Ensembl:
ENSXMAG00000000117
UniProt:
A0A3B5PXX2
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All DBs
Position
16:8992988..8999166
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AA seq
548 aa
AA seq
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MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTSVEDGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAMYSPKDPTMVSETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLRSVSPPIPSAPLYDEINFSGSLGGDSRQLSSPEHLSDGNLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVAESLSPDDEDR
MPSGGDILQDCSSEHCSLTKAESDPAGDLSLPGSSDSTESLKSQSTNCSSQPLLCPTSSL
HMEDEHFN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagtcgtaggattgctggtgttgaagacatcgatatccaggcaaat
tcggcctatcgatttcccccgaaatctgggaattacttcgccagccatttcttcatggga
ggagagaaatttgatactccacatccagagggctacctctttggggaaaacatggacctg
aattttcttggaaataggccagtgcagtttccatatgtgacacctgcaccccatgaacca
gtgaaaaccttgaggagtctggttaacatacggaaggactctctgcgtttagtgaggtac
aaagacgactcggacacttcggtggaggatggcgggaaacccaaggtccagtacggcgtg
gagtttacctttgatgctgatgccagggtcgccataacgctctactgccaggcgtttgag
gagttctccaatgggatggctatgtacagcccaaaagatccaaccatggtctctgagaca
gtgcactacaagcgtggggtgagccagcagttctccatgccgtccttcaaaatagatttc
agcgagtggaaagaggaagatctaaactttgatttggaccgaggagtgtttcctatggta
atccaagctgtggtcgatgaaggagatgattgtcttggacatgctcatgtgcttttggca
gcatttgaaagacatgttgacggcagtttctccgtcaagcctctgaagcagaagcaaatc
gtggaccgtgtcagctacctcctccaggaaatctacgggattgagaacaaaaacaaccaa
gagaccaagccatctgacgatgagaacagcgacaacagcaatgagtgtgtcgtctgtctg
tccgacctgagagacacactcatcctgccttgcagacacctgtgtctctgcaactcctgc
gcagacactctgcgctatcaggccaacaactgtcccatctgcaggctgccctttagagcc
ttgctgcagataagagctgtgaggaagaaacctggagctctctctcccgtgtccttcagt
cctgttctggctcaaactatggaccatgatgagcactcaagctctgactcggtcccgcct
ggtttcgaacccatctccctgctggaggcgctgaacggtctgcggtcggtgtctcccccc
atcccttctgcgccgctgtatgacgaaatcaacttctccgggagtttgggaggggacagc
cggcagctgagctctccggagcatttaagtgacggaaatcttcagaaaggaaaagtcagc
aagtcacctgacagcaccctgagatcgccatcctctcccatccaggaggaggatgaagag
aaactgtctgagatgtctgacgcacagccacacacactactctccagcagccccgctccc
acagatgctacagccaccgaggatgtggcggaatctctttctccagacgacgaggacaga
atgccgtctggaggagacatcctgcaggactgcagcagtgagcactgcagcttgaccaaa
gcagaaagcgacccagcgggggatctgtctttgcctggttcgtcagactcgacagaaagt
ctaaaaagtcagagcacaaactgctccagccagcctctcctgtgtcccacaagcagcctt
catatggaagatgaacatttcaactga
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