Xiphophorus maculatus (southern platyfish): 102225652
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Entry
102225652 CDS
T02923
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102225652 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102225652 (rad54b)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102225652 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Nodulin_C
Motif
Other DBs
NCBI-GeneID:
102225652
NCBI-ProteinID:
XP_023186822
Ensembl:
ENSXMAG00000013141
LinkDB
All DBs
Position
3:complement(16840971..16857943)
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AA seq
936 aa
AA seq
DB search
MRRSGAPSQLLGNAVKKPRFVPPGASASCPVEESKPLAPKRGLGNALDKVQRSLSAAVVN
KSTCSVLGQTGQTASGLSKVLARVLTATESKENEDETKYDDCTEDVNVSAGVDGGPQWTH
SSPQTPQPPADSPHVSGAAGPDRVRYFSVVWCKASKKKHKRWEGDAVLVARGRTVVLKDM
EGKDIGKGSGYKVSELASLSEGETLMIGGKEIEVMGIVSAEDFAKGRCFQEPQTDQEELH
TKAAPPPPRRFNPKPFCPPTMLGRAGQPENKPQAEQTSKPRHDPLAPGALVMPRPSSNHQ
WLHNKSGLPVVDVVVDPHLTMHLRPHQREGILFLYECVMGMRAAGRHGAILADEMGLGKT
LQSVALCWTVLKQGPYGGKPVAKRVLVVTPGSLVQNWRAEFTKWLGRERISVFTVDQDHR
IEEFLSSPLHNVLVISYEMLLRCLEPIQKVEFGLIICDEGHRLKNSSIKTSSAVSSLSCH
RRVILTGTPVQNDLQEFYAIIEFVNPGILGSITAYRKVYEEPILHSRQPSCSEDERVLGE
ERAAELSRLTGMFILRRTQEIINCYLPPRLDWTLFCMPSPLQQKLYKHLLCHRVFRACLQ
GFTQGGAHLACITALKKLCNHPGLLHDTVKERTERGSVESSLYEGLADLFPESYCSAGFD
TADSGKLLVLSDLLSAIRQLSPSDRVVLVSNYTQTLDLLQDLCVCSGFTFCRLDGQTPTS
QRQRLVDAFNSPYSQSFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRD
GQKKTVHIYRLLTAGTIEERIFQRQVSKLGLSGTVVDLGKAAEHTSFSTSELRDLFSLTD
TPCLTHDLLSCSCSMDGSVNDVEVEEVELVSDRPCQLGRQGDRRGAAQKHLSMSELMRWR
HFSGDTHTFSDPYLDHARSHITFAFQTTISHTPSEQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctcaggagctcccagtcagcttttgggcaatgctgtgaaaaaacctcgcttt
gtgccaccaggagcatctgcttcatgtcctgtagaagaatcaaagcctctagcccctaaa
cgtggcttgggaaatgctctggataaagtccagagaagtctttcagcagcggttgtgaat
aaatcaacctgcagtgttctcggtcaaacaggccagactgcttcaggtttgtccaaagtg
ctggcccgtgttctcactgcaacagagagtaaagaaaatgaggacgagacaaaatatgac
gactgtacagaggacgtaaatgtttctgcaggagtagatggaggcccccagtggacccac
tcgtctcctcaaacccctcaacctcctgcagattcacctcatgtctctggagctgctggc
ccagacagagtccgatacttcagtgtggtttggtgtaaagccagcaagaagaaacacaag
cgctgggagggagacgccgtgctggttgccagagggcgaacagttgtactcaaagacatg
gaggggaaggatattggaaagggtagtggctacaaggtgtcagagctggcctcgctgtct
gagggagagacgctgatgataggagggaaggagatagaggtgatgggcatcgtctctgct
gaggactttgccaaaggtcgttgtttccaggagcctcaaacggatcaagaggaactgcac
actaaggctgctccacctcctcctcgccgcttcaaccccaaacctttctgccccccaaca
atgttgggcagagcaggacaaccagaaaataaaccacaagcggagcaaaccagcaaacct
cgtcatgacccgctagctccaggtgccttagtgatgcctcgcccctcttccaaccaccag
tggcttcataacaagtcaggccttcctgtggtcgacgtcgtcgttgacccacacctgacc
atgcacctgcgaccccaccagagggagggcatcctcttcctctacgagtgtgttatgggc
atgagagctgcaggtcgtcacggcgccatcctggcagatgagatggggcttgggaagacg
ctgcagagcgtggcgctctgctggacggtgcttaagcagggaccttacggcgggaaacca
gtcgccaagcgtgtccttgtggtcactcctggcagcctcgtgcagaactggagagcagag
ttcaccaagtggctcggccgggaacggatcagtgtcttcactgtggatcaggaccacaga
atagaggagtttttatcctcccctctccacaacgttctggtgatcagctatgagatgctg
ctgcggtgcctggagccgatccagaaagtggagtttggtctcataatttgcgatgagggt
cacagactgaagaacagcagcatcaaaacgtcctccgccgtcagcagcctcagctgtcat
cgcagagtcatactcacagggaccccagtccaaaatgacctgcaggagttctacgccatc
atagagtttgtgaacccgggaattcttggttcgatcactgcttatagaaaagtttatgaa
gaaccaattctgcactccagacaaccatcctgctctgaggacgaaagagttttgggggaa
gagcgcgccgctgaactctctcgtctcaccggcatgttcatcttgcggcggacgcaggag
atcatcaactgctacttgccgcctcgtctggactggaccttgttctgcatgccgtcgccg
ctgcagcagaagctgtacaaacacctgctctgccaccgcgtcttcagagcctgcctgcag
ggcttcacacaaggcggcgcacacctggcctgcatcactgcgctgaagaagctctgcaac
catcctggcttgctccatgacactgtcaaggagagaacagagcgcggatctgtggagagc
tctttgtacgagggacttgcagatctcttcccagaatcctattgttcagcaggattcgac
accgctgactccgggaaacttttagttctgtccgacctgctgagtgccatcaggcagctc
agcccttcagaccgggtggtcctggtgtcaaactacacccagactttggacttgcttcag
gacctgtgtgtttgttccggcttcacgttctgccggctcgacggtcagacgcccacgagc
cagcggcagcggctggtcgacgccttcaacagcccctactctcagagcttcctgtttctg
ctgagctccaaagcaggcggtgtgggactgaatctgatcggagcgtcgcacctggtgctg
tacgacatcgactggaaccccgccaatgacattcaggccatggctcgggtatggagagat
ggacagaaaaagacggtgcacatttaccgtctcctcactgcaggcactattgaggagcgt
atatttcagagacaggtgtccaaactggggctgtccgggactgtggttgacttggggaaa
gcagcagaacacacaagcttctccaccagcgagctgcgagatcttttcagcctgacggac
acgccgtgtttgacccatgacctgctgagctgcagctgcagcatggacggctcggtcaac
gacgtggaggtggaggaggtggagcttgtttctgacaggccgtgccagctcggtcgtcag
ggcgaccgcaggggggcggcacagaagcatctcagcatgtcggagctcatgcggtggaga
cacttctccggtgacacacacaccttctcagacccttaccttgatcacgcacgaagccac
atcaccttcgccttccagaccaccatctcccacacacccagcgaacagtga
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