Xiphophorus maculatus (southern platyfish): 102225694
Help
Entry
102225694 CDS
T02923
Symbol
prdm2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma00310
Lysine degradation
xma01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102225694 (prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102225694 (prdm2)
03036 Chromosome and associated proteins [BR:
xma03036
]
102225694 (prdm2)
Enzymes [BR:
xma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
102225694 (prdm2)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102225694 (prdm2)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102225694 (prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2HE
Zn_ribbon_PaaD
zf-C2H2_11
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
Zn_Ribbon_YjdM
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
102225694
NCBI-ProteinID:
XP_023180903
LinkDB
All DBs
Position
20:15016503..15033810
Genome browser
AA seq
1674 aa
AA seq
DB search
MAFSGESVESLEEIPAQVWSGLPEYLNLGPSAANPSRIGVWATKVIPKGKRFGPFIGEKK
KRSQVTSNVYMWEVYFPARGWMCIDATDPLKGNWLRYVNWARSSEEQNLFPLEINRAIYY
KVLRPIGPGEELLVWYTVEDNPEITAALEEERASRRSSPRSKRARRRLVEKARQAGLGGF
KKTSGAKTTVREMWEGEEGDKEEGERPSGTSQELHEARPLGSTNHKHLQDTSASGVDRGN
YEEDEEEEEDEEEENGDDGCEMQHQTSKQLSEQSSSLLSGSGESHKDPQENLLLAQRGGD
PEQDPDGELEEDLQGESYPCDHCERHFSSRQGLERHIHVHGISNQQAQVFKCRYCNKPFS
SQVGRRRHERRHENGSKKMPGSLAGVGGLLSPAGQTDSSPDCTSPTSQLIAIGTQFDMQR
KELGPHTDRPSMFDENGESKELHPCKYCNKAFGTHTNMRRHQRRIHERHLLPKGVRRKGM
LLQEASAQQPGESPSASPPLVYMPSADTEDEADKDDYAIDISKNISENLSFYIDGKIVST
STASSCEVIEVDTRSAALFGLDTVIISPNQISQALKVEARTNAAKPITSNEQPAAKRRTS
TPPLVTSLKVETETAPSPSSSTSSSSNLLVGGLFQQDSSALQREKTIYLSPKLKQLLQTQ
DFQKSTIALITESHRLATLPGASGKYKRRTGSPPSSPQLSPTVKTESCKAEAASGNALKV
PKLESHSVPPPESLLDEEDEDSPSSSGSHASSSGGGSSCNQQPLDLSSSVCKRSDGPNQA
TGDSALDLSVNRKVTTESDLKGGPAPQPLVKKKKPNTSMLEKVLMNEYVGLTLPGEEGPS
TLTTLSCFRTQSPNVASDSAHPSPPSLTPVTINPSSPSSSSVTSPTPPPPILPTIPSPPT
LPGSPQPSDSPLPVLSPKMSPKADEPKHLSDSIENFSSEENKDEEESYISEPQDYPSTPL
QSPPNQSVASSPPGPKTEDLAKNVDVSFSAVCNSLTNGSLTQVEETEISLKADFAALSPQ
PELPSSSKSPPVASNRSSPSAALQSPPQIKVKEEPLHCEDDLSAVNHSPHDSSLPPAALD
KLSTEIREAEEADSTYCKTFVCNVCEEPFDSIKELSGHITDHAADWPFKCEFCVQLFSDE
AAVLAHRTALHGVGRIFLCSVCSKEFAFLCNLQQHQKDLHPNESCTHTTVESGKLRPQNY
TDPSRAKEESAPSTPVPGTPNKNDVSAKEEADVNGNNTEDPNEELYTTIKIMASEGAKPK
GPDVRLGINQHYPSFKPPPFPYHSRSHTGSVASATNFTTHNIPQTFSTAIRCTKCGNSFD
NMPELHKHILVCANASDKKRYTPKKNPIPLKQIVKSPNGMVLPTTTAEAAPEAAAVAGQS
PFRRMGHPKKLNFNQETAKTKMSALSKKKNQLVQKAISQKHRTVSTAKKVVVKSEDVPLS
NVCPHCSREFTYTASLHKHMVISCPMKPAVTKKGKKGLAEVKKEAVSLVDKNTNRKRLPE
DDVQTESQTKPAGKRRARSLTAAEPESTEVSKGKPPSAVGRLKRPAALSAPISARKKPKK
GQAAALPPPPPPPDTPSDTAQRPTMRTQRTGKKPATKRSAVVKPPPTALPAQLKKEERVS
LRKRDRAGGPVTRSSQMANAAPPAEVKTEEQPLQETKDPQVNDVTLVCLCRAVA
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggctttttccggagagtcagtggagagtctggaggaaattcctgctcaggtgtggagc
ggcttgccagagtatctgaatctgggaccgtcggctgcaaatccgagtcgcatcggtgtt
tgggccaccaaagtgatcccaaaggggaaacggtttggtccatttattggagagaagaag
aagaggtcacaggtcaccagtaatgtttacatgtgggaggtctatttcccggctcgggga
tggatgtgcatcgatgccacagaccccctgaaggggaactggctccggtacgtgaactgg
gctcgttccagtgaggagcagaatctgtttccactggagatcaacagagccatttactac
aaagttttgaggcctatcgggccaggagaggagctgctggtgtggtacacagtggaagac
aaccccgagataacagctgcgctggaagaagaaagagccagcagaaggagctcacccagg
tcgaaacgagctagaagaaggttggtggagaaagccagacaggctggtttgggcggattc
aagaaaacaagtggagccaaaactactgtcagggaaatgtgggaaggggaagaaggtgat
aaggaggagggtgagagaccatcagggacctctcaggaactccatgaagcccgtccttta
ggaagcaccaaccacaagcatttgcaggacacgtccgcatcaggggtggacaggggaaac
tatgaggaagatgaagaagaagaggaggacgaggaagaagagaatggcgatgacggttgt
gaaatgcagcaccaaacctcaaagcaattatccgagcagtcgagctcgttgctatctggc
agtggagaaagccataaggatccacaggagaacctcctgctagctcagcggggtggagac
cctgagcaggatcccgacggggagctggaggaagacctccaaggagaatcctatccctgc
gaccactgtgagcgccacttctcctccagacagggtctggagcgccatatacacgttcat
ggcatcagcaaccaacaagcacaagtctttaagtgccgatactgcaataagcctttcagc
tcacaagttgggcgccggcggcatgaaagacggcatgaaaacggatccaagaagatgccc
ggctccctggctggagttggcggcctcctcagtcctgcagggcagactgattcaagtcct
gactgcaccagtccaaccagtcagctcatagccatagggacccagtttgacatgcagagg
aaagagttgggaccccacaccgatcgtccgtcgatgtttgatgagaacggggagtcaaag
gagcttcatccctgcaagtactgcaacaaagctttcggcacacacaccaacatgcgcagg
caccaacgcagaatacatgagcgccacctgttgccgaagggagttcgtaggaaaggcatg
ctgctgcaggaggcgtcagcgcagcagccgggcgagtccccgagtgccagccctcctcta
gtctacatgcccagtgccgacacggaggacgaggcagacaaagacgattacgccatcgac
atatccaaaaacatctcggagaacctcagcttctacattgatggcaagattgtgtcaacg
agcacggcaagcagctgtgaggtgatagaagtggacacgaggtcggcggctttgtttggc
ctggacacagtcatcatcagcccaaatcagattagtcaagcactgaaggtggaggcgaga
acgaacgccgcaaagcccatcaccagtaatgagcagcctgcagcaaaaagaagaacatca
actcctcccctcgtcaccagcctgaaagttgagacggaaactgccccttcgccttcatcc
tccacgtcgtcctcatccaacctgttggtaggaggacttttccagcaggattcatcagca
cttcagagggagaaaaccatttatctctcccctaaactcaaacagctccttcagacgcaa
gacttccaaaaatcaacaatagccctcattaccgagagccacagattggccacacttcca
ggcgcttcaggaaagtacaaaaggaggaccggttctccgccttcatccccacagctcagt
ccgactgtcaaaactgaaagctgtaaagcagaagcagcgagcggaaacgccctcaaggtg
ccaaagctggaaagccatagtgtgccgcctcctgaaagcctcctagatgaagaagatgag
gattctccaagctcctccggaagccacgcctcctccagcggcggggggagttcctgcaac
cagcagcccttggatctgtccagctctgtctgcaagcgaagcgacggcccaaaccaggcg
actggagactcggctctggatttaagtgtaaaccggaaagtcaccacagaatccgattta
aaaggcgggccagcgccacagccgctggtaaagaagaaaaagccaaacacgagcatgttg
gaaaaggtgctaatgaacgagtacgttggtctaacgttgccaggagaagaggggccttca
accctgacaaccctaagttgttttcgtactcagtcgccaaatgttgcatcggattctgct
cacccgtctccaccctccctgactccagtcactataaacccctcctcgcccagctcttct
agcgtaacgtctccgacgccacctcctcccattctgcccactataccgtctcctccgact
ctccccggctcgccgcagccttcggattcgcccctcccggtcctctcgccaaaaatgtct
ccaaaagctgatgaacccaagcatctgtcagattctattgaaaacttctcatcggaggaa
aacaaggatgaagaggagagttacatttctgagccacaagattacccaagcactccactc
caaagtccccccaatcagtcggtagcatcaagtccacctggacctaaaacagaagatctg
gctaaaaatgttgatgtttctttttctgcagtatgtaacagtctaacaaacggcagctta
acccaggttgaagaaacagaaatatctttgaaagccgattttgctgctctttcccctcaa
ccagaattgccgtcatcttccaaatctcctcctgttgcatcaaacaggtcgtctccatca
gctgctttgcaatctcccccacagataaaagtgaaagaagagcctcttcactgtgaagac
gacttgtctgctgtaaaccactcacctcacgactcctcgcttccgcctgctgctctcgat
aaactgtccactgaaatccgggaggcagaggaagcggactccacatactgcaagaccttc
gtgtgcaatgtgtgcgaggagccgttcgactccatcaaagagctcagcggccacatcaca
gatcacgctgctgactggcccttcaaatgcgaattttgcgtccagctgtttagtgacgag
gcggccgttctggcccaccgcacggcgctgcatggggtgggtcgcatcttcctgtgctcc
gtctgttccaaagagtttgcctttctctgtaacctccagcagcaccaaaaggaccttcac
cccaacgagtcatgcacgcatactactgtagagagcggcaagctgaggccgcagaattac
actgacccgtccagagccaaagaggagagtgctccctcaacaccagtgccaggaacgccc
aataaaaatgacgtgtcggcaaaagaggaggccgatgtgaatgggaataacacagaggac
cccaacgaggagctgtacactacaataaagatcatggcttccgagggcgcgaagcctaaa
ggtcccgacgttcgacttggcatcaatcaacactatcccagtttcaaaccaccacctttc
ccctaccacagccgctctcacactggttctgtggcctctgctacaaacttcaccacccac
aacataccgcaaaccttcagcactgctatccgctgcaccaaatgtggcaacagctttgac
aacatgcccgagctccacaagcacatactggtgtgtgccaacgccagcgacaagaagcgt
tatactcccaagaaaaacccgattcccctaaagcaaattgtgaagagccccaatggcatg
gtgttgcccaccacaacagctgaggctgcaccggaggccgccgccgtcgcaggtcagagt
ccgttccgtcggatggggcatccaaagaaactcaacttcaatcaggaaactgctaaaacg
aaaatgagcgccctgagtaagaaaaagaaccaactggtccagaaggcgatctcgcagaaa
catagaaccgtcagtactgcaaagaaggtggtggtcaaatctgaagacgtgccgctgtcc
aacgtctgcccccactgcagccgggagttcacctacacggctagtctgcataaacacatg
gtcatcagctgccccatgaaacctgccgtcactaaaaagggcaagaaagggttggcagag
gtgaaaaaagaggctgtttctttagtggataagaacacaaataggaagagacttccagaa
gacgatgtgcagacagagtcacaaactaaacctgcgggaaagagaagagcgcgaagttta
actgcagcagagcctgaatccactgaggtgagcaaaggaaagcctccttctgcagtgggt
cgattaaaaaggcctgccgcgctctctgcacctatttccgcccgcaaaaaacccaaaaag
ggccaagctgcggctctacctccccctccgcctcctcctgacactcccagtgacacagca
caacggccaaccatgagaacgcagcgtacgggcaaaaagccagcgactaagagatcagca
gtggtcaaaccgccaccaacagcgctgccagcacagctgaagaaagaggagcgtgtctcg
ctcagaaagagggaccgagccgggggtccggtcaccaggagctcacagatggccaacgct
gctcctcctgctgaggtgaagactgaggagcaaccgctgcaagagacgaaagacccccag
gtaaacgatgtcacgttagtatgtttatgtagagcagtggcttaa
DBGET
integrated database retrieval system
