Xiphophorus maculatus (southern platyfish): 102225750
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Entry
102225750 CDS
T02923
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102225750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102225750
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102225750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102225750
NCBI-ProteinID:
XP_014328409
Ensembl:
ENSXMAG00000001628
UniProt:
M3ZHC9
LinkDB
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Position
8:14083437..14123656
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AA seq
612 aa
AA seq
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MSNSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAVKAGMNIGDIILSINGISSE
GMNHLEAQNKIKACTGNLSLTLQRASAVSKEESHKEEPQEIIKPVPITHPAPSTTYTKPP
SQPTPLYNKTARPFGGGSSGVTASSSPAAPKVASIPSESSAFTPAAPSQPPQPPFALKSS
IPVSDSVVVNSAPKISPGRSAFTSPSASSASSNSSSSPRVTAPPSQPNVPQPSVYNTPIN
LYSNANACEVAIGQRRGLLESQGLSEHVNGKAGVELEKSVSPLSDASKKRLIEDTEDWHP
RTGTSQSRSFRILAQMTGTENEQLPENGKKEAVDPTAPSVHTSPAAKTYSNSAAAPRNGN
VVPGSTFKTPAQNKASFQPGGSPGFSKVGTGPSFGKIVGPAQKELDRPTPQPHPEDLNSL
VQRAEHIPAGTRTPMCCKCNKVIRGPFLVAMGMSWHPEEFNCAHCHSSLAERGFVEEKNQ
VYCVHCYEQFFAPTCASCNQKILGEVMNALKQTWHVSCFVCAACHQPIRGNTFHMEDGQP
YCERDYYTMFGTNCHGCDFPIEAGDKFLEALGFTWHDTCFVCVVCSTSLEGQPFFSKKDK
PLCKKHAHSVNI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagctacagtgtctccctggccggccctgccccgtggggctttagactgcaa
ggagggaaggacttctgcctgcccctcaccatctcacggctgactgatgggggcaaggca
gttaaagccgggatgaacattggagatatcatcctttctattaatgggatttcctcagaa
ggcatgaatcacctggaggctcagaacaagattaaagcctgcacaggcaacctcagcctc
actctacaaagagcctccgctgtctcgaaagaggaatcgcacaaggaagagcctcaggaa
atcattaagcctgtgccgatcactcaccctgcgccgagcaccacatacaccaagccacca
agccagcccactcctttgtacaacaagacagctcggccatttgggggcggcagcagtggg
gttactgcctcttcctccccggctgctccaaaagttgcctctattccttccgaatcatca
gctttcaccccagccgctccatctcagcctccacagcctccctttgcattaaagtcaagc
atccctgtttcagattcggtcgtagtaaactctgcccccaaaatcagccccggccgttct
gccttcacctccccctctgcctcatccgcttcatctaactcctcatcttcacccagagtg
acagcccccccttcccaacctaatgtcccgcagccctccgtctataacacacctatcaac
ctgtactccaacgccaatgcttgtgaagttgctattggacaaaggcgaggccttttggag
agccagggtctgtcagagcatgtaaatgggaaagctggtgtggagcttgaaaagagtgtg
tcccctctgagtgacgccagcaaaaagcgtcttattgaagacacggaggactggcaccca
cggaccggtacctcccagtctcgctccttccgcatcctcgcacaaatgactggcactgag
aacgaacaactgccagaaaatggaaaaaaagaagcagttgacccaaccgctcccagtgtt
cacacatcacctgctgcaaaaacatattccaattctgcagcagcacccaggaatggcaat
gtagtccctggatctacatttaagactcctgctcaaaataaagcctccttccaacctgga
ggttctccaggcttttctaaagtgggaacaggtccctcatttgggaaaatagtcggtcct
gctcagaaagaactggaccgccccactccacagccacatcctgaggatctgaactctttg
gtgcaacgtgctgagcatatacctgctggtacccgcaccccaatgtgctgcaagtgcaac
aaagtcataagaggcccattcctcgtggccatgggcatgtcctggcaccctgaggaattc
aactgcgctcactgccactcctccctggcagaacggggatttgttgaagagaagaaccag
gtgtactgtgtgcattgctacgagcagttttttgctcccacctgtgccagctgcaaccag
aagatcctcggggaagtcatgaatgccctgaagcagacctggcatgtgtcctgttttgtt
tgcgctgcctgccaccagccaatcagaggcaacacatttcacatggaggatggacagcca
tactgtgaaagagactactacaccatgtttgggaccaactgccatggctgcgacttcccc
attgaggccggagacaagttcctggaggcgctgggttttacctggcatgacacctgcttt
gtgtgtgtggtttgctctaccagcctggaaggccaacctttcttctccaagaaggacaag
cctttgtgcaagaaacatgctcactctgtcaacatctga
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