Xiphophorus maculatus (southern platyfish): 102225764
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Entry
102225764 CDS
T02923
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102225764 (chd5)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102225764 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
102225764
NCBI-ProteinID:
XP_023181076
Ensembl:
ENSXMAG00000014686
UniProt:
A0A3B5QWN8
LinkDB
All DBs
Position
20:complement(10097877..10143473)
Genome browser
AA seq
2001 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDETERNTVPLTALASFFSDDDSLKKQKKKKPKKIK
EGKIPKVKKRKKEGGIQPRLDSDLEEISEVEEERERPEIGSESESSAYGPTKKKKKKPRE
KKERKPRKKKRDEDDDDDDDDDGNMKEPKSSGQLMQEWGLEDVQYGFTEDDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVA
QPTSVSISQLSSQQGTLKKAKTKEGKGPGVRKKSKTLKEVKKKPKPKKTKSKTGQSGKKK
KASSSEEDFLEESDFDDISIHSASVLSDTSGATKKKARRGRRKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEEEEEP
AGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQKILHWMWGEPPLPAEPPAGPDGKPIDPLTKPPLKGRPEREFFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRKSKDPQYAAMEERFYRYGI
KPEWMIIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWEADDFDVPEYEIHKAFYWDHREQ
ILGEDQRPLVVRKGKKLKENYPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVVTYTGDKDSRAIIRENEFTLEDSAIKSGRKVFRMKKDSPIKFHVLLTSYE
LITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELF
HLLNFLTPDRFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI
VRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP
VLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKY
ERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHND
IQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQ
ELDDILKFGTEELFKDEMEAARTMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEIQ
NMNEYLSSFKVAQYVVKEEDEEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDATQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLK
NEKDKPLPPLLARVGGSIEVLGFNTRQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE
REFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVN
GKLSSPDLIPIGMELKKLTESVSSDPNTPVPASPVATQPSTPVPPEKAEFLVRNAEDKET
TETDGKKLSEQEQAPIAELASAPEKAADSDETKATSEEKTGDERNRTKSPMTKAEPPAYP
KESAFKPAELPSSHTSPKTDPCKEAEKSSEKGEAGSPREKTEDKENKPDDVKSEDALEGR
LNGDKDTLDELDESRREDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQPFS
QGGFGCSQMYSSGFGGGFRGPGGQPMVNYSQMPLGPYVSVSSNGPPPPTSHLDKKSLDSF
RDGATPELKSGKASDVICIED
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaggacgacatggattttgaagacgat
atgccagatgaagatgacgaaactgagcgcaacaccgttcccctcacggcccttgcgagc
ttcttctctgatgatgactccctcaaaaagcagaagaagaaaaagcccaaaaagataaaa
gaggggaaaatacccaaagttaagaagaggaaaaaagagggaggaatacagccaagactt
gacagtgacctcgaggagatttcagaggtagaggaggaacgtgaacggccagaaattggc
tctgagagcgaaagcagtgcatatggccccaccaaaaaaaagaagaaaaaacccagggag
aaaaaagaaaggaagcccaggaagaagaagagagatgaggatgacgatgatgatgacgat
gatgatggtaacatgaaagaacccaaatcctctggccagctgatgcaagaatggggtctt
gaggatgttcagtatgggttcacggaggacgactacaaaacaatcaccaattacaaggct
ttcagccagttcctcaggcccctcattgccaagaagaatccgaagattcccatgtcaaag
atgatgacagtgttgggagccaagtggcgtgagttcagtgccaacaacccgttcaaaggg
gcatctgccaccgctgtggccgctgcggtggccgctgcggtggaaacggttactgtagct
cagccaacatctgtcagcatcagccagctgagctctcagcagggcacattaaaaaaagcc
aaaaccaaagaaggaaaagggccaggagttagaaagaaaagcaagaccttaaaagaagtg
aagaagaaaccgaagccgaagaagaccaaatcaaaaactggtcaaagtgggaagaagaag
aaagcatcctctagcgaggaggactttttggaggagtcagactttgatgacatcagtatc
cacagtgcctctgtgctttctgatacctctggggccacaaagaaaaaggcccgacgtggg
cggagaaaaaggaaaaaggaggacggcgatggctatgagactgaccaccaggactactgt
gaggtttgccagcagggaggagaaattatcctctgtgacacttgtccaagagcctaccac
cttgtctgtctggatcccgagctggaaaaggcacctgagggaaaatggagctgcccacac
tgtgagaaggagggaatacaatgggaggccaaagacgaagaagaggaggaggaggagcca
gcaggtgaggaagaggatgaccatatggagttctgcagagtttgcaaggatggaggggaa
cttctttgttgtgacacctgtccatcatcctaccacatccattgcctcaatccacctcta
cctgagatcccaaacggggagtggttgtgtcctcgctgcatgtgtcctcctctcaaaggt
aaagtgcagaagattctccactggatgtggggagaaccgccgctgccagctgagccaccc
gcaggccctgatggcaagccaattgatccactaaccaagcccccgctcaaggggcgccca
gagagggaattctttgtaaagtgggctggcctttcatactggcactgttcctgggtcagc
gaactgcagttagagctgtaccacacagtcatgtatcggaactaccagcggaagaacgac
atggacgagcccccaccatacgattacggctcaggagaggaggagctcaacaatgagaag
aggaagagcaaagacccccagtacgctgcaatggaggagcgcttttaccgctacggcatt
aaaccagagtggatgatcatccaccggatactcaaccacagttttgataaagatggtgat
gtgcattacctaatcaagtggagagacttaccctatgatcaatgcacttgggaggcagat
gattttgacgtcccagagtatgagatccacaaagctttttactgggaccacagagagcaa
attttaggagaggaccaacgccctcttgtggtaagaaaagggaagaaactaaaagagaac
tacccaaaaagggaagtccctcctgatgcccccatcatagatccaaccatcaaatttgag
caccagccctggtatattaatgccacagggggaacgctgcacccataccagctggaaggt
ctgaattggttaagattttcctgggctcagggaacagataccatcctggcagatgaaatg
ggcctcggaaaaacggttcagacaatagtctttctctactcactgtataaggagggccat
tccaaggggcctttcttggtgagtgcacctctgtctactatcatcaattgggagagagaa
tttgagatgtgggctccagatttctacgtggtgacttacaccggagacaaagacagcagg
gcaattatcagagagaatgaattcaccttggaagacagcgcaataaaatctggacgcaag
gtcttccggatgaagaaagactctcctatcaagtttcatgtgctgctgacatcttacgag
ctgatcactatagatcaagccattcttggctccatcacctgggcctgcctggttgtagat
gaggctcacagactgaagaacaaccaatcaaagtttttcaggattcttaatgggtataag
atctactacaagctgctgctcactggtactcctctgcagaacaacctggaggagcttttc
catctacttaacttcctcaccccagaccgcttcaacaacctggaaggcttccttgaggag
tttgcagatatctctaaagaggaccagatcaagaagctccatgacctccttggacctcac
atgctccggcggctgaaagctgacgtcttcaagaacatgccggcgaagacagagctcatt
gtcagagtggagctcagtcccatgcagaagaaatattacaagtttattttgacgcgaaat
tttgaggctctgaactccaaagggggaggaaaccaagtgtccctgctcaacattatgatg
gacctgaagaagtgctgtaaccacccctacctgttccctgttgctgctgtggaggctcct
gttttgccaaacggttcttatgatggcaacctgctggtgaagtcttcaggaaaactaacc
ctgcttcaaaaaatgctgaagaaactcaaagatgaaggacacagagttcttattttctct
cagatgacaaagatgttggatctgcttgaggattttctggagtttgaaggctataaatat
gaacgtattgatggggggattactggaggcttacggcaggaagcaattgatcgtttcaat
gctccaggggcacagcaattctgctttttgctttcaacgcgagccggaggtctcggcatc
aatttggctagtgcagacaccgtcatcatctatgactctgactggaatccacacaatgac
atccaagcttttagcagagcccaccgaattggccaaaacaagaaggtgatgatttatcgt
tttgtgactcggggatctgtggaggagagaatcactcaggtggcaaagagaaaaatgatg
ttgactcacctggtggtgaggcccggcctgggctccaaaactggttccatgtccaagcaa
gaactggacgacatcctcaagtttggaactgaggagctttttaaggatgagatggaagca
gcacgaaccatgggagataacaaagatggtgaggagggcaacgtcattcactacgatgac
gatgccatttcaaagctactggaccgcagccaagatgccaccgaggacacagagatacag
aacatgaacgagtacctgagctcgttcaaggtggcgcagtatgtggtgaaagaagaagat
gaagaggaggaggtagagcgagaaatcatcaagcaagaggagaatgtggacccagattac
tgggaaaagctcctccgccatcattatgagcagcagcaggaggacctggcccgaaatctg
ggaaaaggcaaacgcattcggaagcaggtcaactacaacgacgcgactcaggaggaccaa
gaatggcaggatgatctttcagacaatcaatcggagtattccgtggggtccgaagatgag
gacgaagattttgaagagaggcccgaaggtggacgcaggcagtctcgtcgacaacttaag
aatgagaaagacaaacctctaccccccttactggcacgtgttggaggcagtatagaggtc
cttgggttcaacactcgccagaggaaagctttcctcaatgccatcatgcgctggggcatg
cctcctcaggatgctttcaactcgcactggctggtccgggaccttagagggaagagcgag
cgcgagtttagggcctatgtgtctctgtttatgagacatttatgtgagccaggtgcagac
ggagcggagacctttgcggatggagtcccccgtgagggcctgtctcgacagcatgttctc
accaggatcggagtcatgtcgcttgtcaggaaaaaggtgcaggagtttgaacatgtaaat
gggaagctgagctctccagatctgattcccattggaatggagctgaagaaactgactgaa
agtgtgtcttcagatcccaacaccccagtgccagccagccctgttgctacacagcccagc
acccccgtcccaccagagaaagctgagtttttggtacgaaatgctgaagataaggagact
acagagacagatggaaagaaactatctgagcaggaacaagctcccattgcagagctagca
tctgcacctgagaaggctgctgacagtgacgagacgaaggcaacctcagaagagaaaaca
ggagatgagaggaacagaaccaaatcccccatgacaaaggccgagccacctgcctaccca
aaagagtctgctttcaagccggcagagctgccatctagtcatacctcacctaagacggac
ccctgcaaagaagccgagaagtcctctgaaaaaggagaggctggttctcctcgggaaaaa
actgaagacaaagaaaataagccagatgatgtgaagagtgaagatgcattagagggtcga
ttgaacggagacaaagacactcttgatgagctggatgagagcagaagagaggacaaaaat
ggattcaaagccaagttcatgtttaatatcgcagatggaggttttacggagttgcacacc
ctgtggcaaaccgaggagcgagcggctctttcgtctggaaaaatgcatgacatctggcat
cgtcgccatgactactggctgcttgctggcatcgtaacacatggctatgctcgctggcaa
gacattcagaatgatccccgatatgctattctgaatgagccattcaaaacagagatgcac
aaagggaactacttggagatgaagaacaagttcctggcgcggcgctttaagttgttggaa
caggcattggtgattgaggagcagttgcgacgggcagcttacctcaacatgacccaggac
cccagtcaccctgccatggctctcaatacgcgctttgctgaggtggaatgtttggccgag
tcccaccaacacctctccaaagagtctctggctgggaacaagcctgccaatgctgtgctt
cacaaagtgctgaaccagctagaggaacttctgagtgacatgaaagcagatgtgacacga
cttcccaacatgctgtccagaatcccaccagtgtcggctcgtttgcaaatgtcggaaagg
agcatcctgagccgcctcaccagcagaggcagcgaacctccaccacagcagccttttagc
cagggaggctttggctgctctcagatgtacagcagcggttttggtgggggattcagagga
ccaggcggacagcctatggtcaactacagccagatgccccttggaccttacgtcagcgtg
tcatccaatggccccccgcctcctacaagccatttggacaagaaatcacttgactcattc
agagacggggccacgcctgaactcaagtcaggcaaagccagtgatgtcatctgtattgag
gactag
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integrated database retrieval system
