Xiphophorus maculatus (southern platyfish): 102225865
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Entry
102225865 CDS
T02923
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102225865
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102225865
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102225865
NCBI-ProteinID:
XP_005798102
Ensembl:
ENSXMAG00000019932
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Position
7:complement(11772515..11876518)
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AA seq
296 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTSTGPTGPNGGSKASQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLSVGMSSSGVGQRLESPGGHGGSAGSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQ
SYMNASPSSYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSQSDRDQWTWITQWKP
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagactgaccttcattcccccggcccccaaacgaacacgagc
acggggccaacagggccgaacggcggctccaaagcgagccaggagcgcgtgaagagaccc
atgaacgcgttcatggtgtggtcccggggccagcggaggaagatggcgcaggagaacccc
aagatgcacaattcggagatcagcaagcgcttgggcgccgagtggaaggtgatgtccgag
gcggagaagcgtcccttcatcgacgaggcgaagcggctgcgagccatgcacatgaaggag
catccggattacaagtaccggccgcggcgaaagacgaagacgctgctgaagaaggacaaa
tactcactggccggcgggctgctttccgggcccagcggcggcggtggtgtcggtttaagc
gtcggcatgagctcatccggggtcggacagaggttagagagccccgggggtcacggaggg
tccgccggctccggctacgcgcacatgaacggctgggcgaacggcgcgtactcggggcag
gtggccgcagccgccgcggccgctgcgatgatgcaggaggcgcagctcgcctacagccag
caccccggcagcggggcacaccaccaccaccactcgcaccaccaccactcccacaacccg
cagcccatgcaccgctacgacatgacggccctgcagtacagccccatctcgaactctcag
agctacatgaacgcctcgccgtccagctacggcgggatcacctacacgcagcaccagggc
tccggcgtctcctcctcggctgccatgggaacgctggggtcgctggtgaagtcggaaccg
agccaaagtgaccgtgaccagtggacgtggatcacccagtggaaaccgtaa
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