Xiphophorus maculatus (southern platyfish): 102225927
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Entry
102225927 CDS
T02923
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102225927
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102225927
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102225927
Intermediate filaments
Intermediate filament-binding proteins
102225927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
102225927
NCBI-ProteinID:
XP_023189545
Ensembl:
ENSXMAG00000004511
LinkDB
All DBs
Position
5:complement(265315..296997)
Genome browser
AA seq
2340 aa
AA seq
DB search
MMTTVAAEYDPMELHGQYSSSDTVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEAERYHDIKCIAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVVNNANKHSVAD
SGYKPCDPQIIQDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSMEHGKDLTGAVRLLSQQRALEDEMSGRAGHLQHTIAEGRAMVDAGHFGATKIQER
VSDLKAQWAALEQLAAVRKKRLEEALAMHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRSVIDSLHEQVALLPKEEAESEVVQGRLAGIEERYKEVSELT
KLRKQALQDALALYKMMSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFENLEPEM
NNQASRVAVVNQIARQLIHSGHPSETNIRTQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIKEKTKLIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLGDLRGE
AQRLAEEHPDQANAITDRLAEITAVWDEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLSEAEKLMAQHESIKNEIHNYEEDYQKMRDMGEMVTQGQVDAQYM
FLRQRLQALDTGWNDLLKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLAGDGNINAERILERVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGTLLVSEKPETEEEVKEKLASLHTLWEKLESTTQTKAQGLFD
ANKAELFTQSCADLDKWLGSLEGQIQSDDYGKDLTSVNILLKKQQMLENQVDVRQREVVE
LQSQVKALGQEVKDTDEVDGRRRVVEKKFQELLEPLRCRRDFLVASREVHQFNRDVEDEL
LWAQERMPVATSTEHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDILERSRSLLQDKSSN
TDLIRQRLADLQQLWKELMEEVEQRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVTMLKKHQIMEQAVEDYAETVHQLSKTSRGLVAAGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINSGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIADKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQ
VRQLQEDAARLQSAYAGDKADDIQRREGEVLEAWRSLLEACDGRRLRLLDTGDKFRFFSM
VRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHFASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSRELGRSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRRQQEEEERMRK
PPGPEPVLVQQDGPQQQSAVTQNGLPSDQDQDSPQDAVEGGGLVNGMVERGSKEPSPAPS
PTSARKSGGSQSATMPARSQEAPALLEGPLHRKHEWEGPNKKASNRSWHHVYCVIRGAEL
SFYKDGKAAAQGAPYHGEAAVGLKDAACDVASDYKKKKHVFKLRVSDGNEFLFQAKDEEE
MSSWIQAVLSAERPAPGAAPGTPPSGRAQTLPVSVSLPAESSPGKRDKEKRFSLFSKKKQ
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggcggccgagtacgacccgatggagctgcacggccagtacagcagc
agcgacaccgtcaacaaccgctgggacgacgactgggacaacgagaacagctccgcccgg
ctcttcgagcgatcgcgcatcaaggccctggcagatgaacgtgaagcggtccagaagaag
accttcaccaagtgggtcaactcccacctgtccagagtctcctgcaggatcaccgacctt
tacctggacctgagggacggccgcatgctcatcaagctgctggaggttctgtccggagag
aggctgccaaagcccaccaaaggccggatgcgcatccactgcctggagaacgtggacaaa
gcgctgcagttcctgaaggagcagcgggttcacctggagaacatgggatcccacgacatc
gtcgacggcaaccaccgactcactctgggcctcatctggaccatcatcctgcgcttccag
atccaggacatcagtgttgagactgaagacaataaggagaagcgatcggccaaggatgcc
ctgctcctgtggtgccagatgaagacggccggttattccaacgtcaacatccacaacttc
accaccagctggagagacggcatggccttcaacgccctcatccacaaacacagacctgac
ctgatcgacttcgacaagctgaagaagtccaacgctcactacaacttgcagaacgcgttt
aacctggcggagcagcacctgggcctcaccaagctactggacccagaagatatcagcgtg
gaccatcctgatgagaagtctgtcatcacctacgtggtcacctactaccactacttctcc
aagatgaaggcgctgaaggtggagggcaaacgcatcgggaaggtgttggacaacgccatc
gagaccgagaagatgatagagaagtacgagtcgctggcgtcggacctgctggagtggatc
gaacagaccatcatcatcctcaacaacaggaagttcgccaactccctggtgggagtccag
cagcagctgcaggccttcaacacgtaccggaccgtggagaaaccgcccaagttcacagag
aaggggaacctggaggttctgctcttcaccatccagagcaagatgagggccaacaaccag
aaggtctacatgccccgtgaggggaagctcatctcagacatcaacaaggcctgggaacgc
ctggagaaggcggagcatgagagggagctggctcttcggacggagctgatccgacaggag
aaactggagcagctggccagacgctttgaccgcaaggcagccatgagggagacctggctc
agtgaaaaccagaggctggtctctcaggacaactttggcttcgacctccaagccgtggag
gcggccaccaagaagcacgaggccatcgagacggacatcgcggcgtacgaggagcgtgtt
caggccgtggtcgccgtggcgaaggagctggaggcggagcgttaccacgacatcaagtgc
atcgcggccagaaaggacaacgtgatccggctgtgggagtacctgctggagctgctgaag
gcccgccggcagcggctggagatgaacctgggcctgcagagggtcttccaggagatgctc
tacattatggactggatggacgagatgaagatgctgctgctgtctcaggactacgggaag
cacctgctgggcgtggaagacctgctgcagaaacacgcgctggtggaggccgacatcgcc
atccaggccgacagggtgaaggccgtcgtcaacaacgccaacaagcactcggtggccgac
agcggctacaagccctgtgatcctcagatcatccaggaccgggtggcccacttggagttc
tgctaccaggagctgacccagctggccgctgagcgccgtgcacgtctcgaggaatctcgc
cgactctggaagttcttctgggaaatggcggaggaagagggctggatccgggagaaggag
cagatcctgtcctccatggagcacggcaaggacctgaccggggcggtgcgcctcctgagc
cagcagcgggccctggaggacgagatgagtggccgggccggacacctgcagcacaccatc
gctgagggccgggccatggtggatgccggtcactttggtgctaccaagatccaggagcga
gtctcagacctgaaggctcagtgggcggcgctggagcagcttgcagcagtgagaaagaag
agactggaggaagctctggccatgcaccagttccaggccgatgcggacgatgtggatgcg
tggacactggacgctctgcgcatcgtctccagtggagagacgggccatgatgagttctcc
acccaggctctggtcaggaagcacaaggatgctgcagcggaggtggccagctaccgttcg
gtcatcgactctctacatgagcaggtcgccctgctgcccaaagaggaggcggagtcagag
gtcgtgcagggccgcctagctggcattgaggagcgctacaaggaagtgtccgagctcacg
aagctgaggaagcaggcgctccaggatgcactggctctctacaagatgatgagtgaggct
gacgcctgcgaagtttggatcgacgagaaggagcagtggttgaacagcatggagattcct
gagaaactggaggacctggaggtgatacagcacaggtttgaaaatctggagccagagatg
aacaaccaagcgtctcgtgttgctgtggtgaaccagatcgcccgacagctgattcacagc
ggccatccgagcgagacaaacatcaggactcagcaggataaactgaacaacaggtggagc
cagttccgagacctggtggaccagaagaaggagtccctgaactctgcgctgggtgtgcag
aactatcatctcgactgcaatgagaccaaatcctggatcaaagaaaagaccaaactaatc
gagtccacccaggagctgggcaatgacctcaccggagtcatggctctgcagaggaagctg
accggcatggagcgagacttggtggccatcgaagacaagctgggtgacctgcggggtgaa
gcccagaggctggctgaggagcatcctgaccaggccaacgccatcacagaccggctggct
gagatcactgccgtctgggacgagatgaagaatactctgaaaacacgagaggagtccctg
ggcgaagccaggaagctgcagcagttcctgcgagagcttgacgacttccagtcctggctg
tcccgcactcagacagccatcgcctccgaagacatgcccaacacgctgtctgaggccgag
aagctgatggctcaacacgaaagcatcaaaaatgagatccacaactacgaggaggactac
cagaagatgagagacatgggggagatggtgacgcagggccaggtggacgcccagtacatg
ttcctgaggcagcggctgcaggcgctcgacaccggctggaacgacctgctcaaaatgtgg
gagaaccggcagaacctgctgtctcagtcgcacgcctaccagctgttcctgagggacacc
aagcaggcagaggctttcctcaacaaccaagagtacgtgctggctcacacagagatgccg
accaccctggagggcgccgagggcgccatcaagaagcaggaggacttcatgaccacaatg
gacgccaacgaggagaagatcaacggtgtggtggaggcaggcaggaggctggccggtgac
gggaacatcaacgctgagcgcatccttgagagagtggcctccatcgacgacaggcacaag
aagaacagggaggcagcagtggagctgctgatgagactgaaggacaaccgcgatcttcag
aagttcctgcaggactgccaggagctctctttatggatcagtgagaagatgctgacggct
caggatatgacctacgacgaggccaggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggccgagctgcagtccaacaaggagtggctggacaagatccagaaggatgggacg
ctgctggtgtcagagaagccagagacggaggaggaggtgaaggagaagctggcgtcactc
cacaccttgtgggagaagcttgagtccaccactcagaccaaagctcagggtctgtttgac
gccaacaaggccgagctgtttacacagagctgtgccgacttggacaagtggctgggcagc
ctggagggccagatccagtccgacgactacggcaaagacctgacatctgtcaacatactt
ctgaagaaacagcagatgctggagaaccaggtggatgtgcgccagagggaggtggtggag
ttgcagagccaagtgaaggcccttggtcaagaggtgaaggacacagatgaggtggacggg
aggagacgggtggtggagaagaagttccaggagctgctggagccactgcggtgtcgcagg
gacttcctggtggcatccagagaagtccatcagttcaaccgtgatgtggaggatgagctt
ctctgggcccaggagaggatgccagtggccacatccactgagcatggacacaacctgcag
acagtccagctgctcatcaagaagaaccagacgctgcagaaggagatccagggccatcag
cctcgcatcaacgacatcctggagcgcagccgcagcctactgcaggacaagtcctccaac
accgacttgatccggcagcgcctggccgacctgcagcagctgtggaaggagctgatggag
gaggtggagcagcggcacggccgactggaggaggcccacaaagctcagcagtactacttt
gacgccgctgaggccgaggcttggatgagtgaacaggagctctacatgatgtcagaggag
aaagccaaggacgagcagagcgccgtaaccatgctgaagaagcatcagatcatggagcag
gctgtggaggactacgcagagaccgtccatcagctgtccaagaccagccgaggactagtg
gctgccggacaccctgaaagcgagcggatcagcatgcgccagtctcaggtggacaagctg
tacgccggcctgaaggacctgtctgaggagaggcggggcaagctggacgagaggctccgc
ctcttccagctcaacagggaggtggacgacctggagcagtggatcgccgaacgggaggtg
gtggccgggtctcacgagctgggccaggactacgaacatgtcacgatgctacaggaacgt
ttccgggagtttgcgcgggacaccgggaacatcgggcaggagagagtggacgccgtgaat
cggctggcggacgagctaatcaactccgggcatggcgacgcggccacggtggcggagtgg
aaggacgggctgaacgaggcctgggccgaccttctggagctcatcgacactcggacgcag
atcctcgccgcctccttcgagctccacaagttctaccacgacgccaaggagatcctggga
cgcatcgcagacaagcagaagaagctgccggaggaggtcggtcgggaccagaacacagtg
gagacgctgcagaggatgcacaacaccttcgaacacgacatccaggcactgggaacacag
gtgaggcagcttcaggaggacgccgcgcgcctgcagtcggcatacgccggagacaaagcc
gacgacatccagcggcgggagggtgaagtgctggaggcgtggaggagcctgctggaggcc
tgcgacggacgcaggctccgcctcctcgacaccggggacaagttccggttcttcagcatg
gtccgcgacctgatgctctggatggacgacgtgatccggctcatcgaggcccaggagaag
cccagagacgtttcctccgtggagctgctgatgaacaaccatcagggcatcaaagcggag
atcgacgcccgcaacgacagcttcacagcctgcatcgagctgggcaaggccctgctggcc
cgcaagcacttcgcctcagaggagatcaaggagaagctgctgcagctcaccgacaagagg
aaggagatgatcgacaagtgggaggaccgctgggagtggctccgcctcatcctggaggtg
caccagttctcgcgggacgcgggcgtggccgaggcctggctgctgggccaggagccctac
ctgtccagccgggagctgggccgcagcgtggacgaggtggagaagctcatcaagcgccac
gaggccttcgagaagtccgccgccacctgggaggaacgcttctccgccctggagcggctg
accacgatggagctgctggaggtcaggaggcagcaggaggaagaggagaggatgaggaag
ccaccgggtccagaaccggttctggtccagcaagacggaccccagcagcaaagcgccgtg
acccagaacggactcccatcggatcaggaccaggactctcctcaggacgccgtggaaggc
ggcggcctggtgaacggcatggtggagcgcggatccaaggagccgagccccgccccttcg
ccgacctcggccaggaagtcaggcggcagccagtcggccacgatgccggcccgcagccag
gaggcgccggccctgctggaggggccgctacaccgcaagcacgagtgggaggggcctaac
aagaaggcgtccaacaggtcctggcaccacgtgtactgtgtgattcgcggcgcggagctg
agcttctacaaggacggcaaggcggcggcccagggcgccccgtaccacggggaggcggct
gtcggcctgaaggacgccgcctgtgacgtagcctccgactacaagaagaagaaacatgtc
ttcaagctcagagtctccgatgggaatgagtttctgttccaagccaaagatgaagaggag
atgagctcgtggatccaggctgtgctgagcgctgagcgccccgcccccggcgccgccccg
ggcacgccgccctccgggcgcgctcagacgctcccggtcagcgtgtcgctacccgccgag
tcgagcccggggaaacgggacaaggagaaacgcttcagcctgttcagcaagaagaaacag
tag
DBGET
integrated database retrieval system
