Xiphophorus maculatus (southern platyfish): 102225927
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Entry
102225927 CDS
T02923
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04517
IgSF CAM signaling
xma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102225927
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102225927
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xma04812
]
102225927
Cytoskeleton proteins [BR:
xma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102225927
Intermediate filaments
Intermediate filament-binding proteins
102225927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
SCAR_helical
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
102225927
NCBI-ProteinID:
XP_023189545
Ensembl:
ENSXMAG00000004511
LinkDB
All DBs
Position
5:complement(265315..296997)
Genome browser
AA seq
2340 aa
AA seq
DB search
MMTTVAAEYDPMELHGQYSSSDTVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEAERYHDIKCIAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVVNNANKHSVAD
SGYKPCDPQIIQDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSMEHGKDLTGAVRLLSQQRALEDEMSGRAGHLQHTIAEGRAMVDAGHFGATKIQER
VSDLKAQWAALEQLAAVRKKRLEEALAMHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRSVIDSLHEQVALLPKEEAESEVVQGRLAGIEERYKEVSELT
KLRKQALQDALALYKMMSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFENLEPEM
NNQASRVAVVNQIARQLIHSGHPSETNIRTQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIKEKTKLIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLGDLRGE
AQRLAEEHPDQANAITDRLAEITAVWDEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLSEAEKLMAQHESIKNEIHNYEEDYQKMRDMGEMVTQGQVDAQYM
FLRQRLQALDTGWNDLLKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLAGDGNINAERILERVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGTLLVSEKPETEEEVKEKLASLHTLWEKLESTTQTKAQGLFD
ANKAELFTQSCADLDKWLGSLEGQIQSDDYGKDLTSVNILLKKQQMLENQVDVRQREVVE
LQSQVKALGQEVKDTDEVDGRRRVVEKKFQELLEPLRCRRDFLVASREVHQFNRDVEDEL
LWAQERMPVATSTEHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDILERSRSLLQDKSSN
TDLIRQRLADLQQLWKELMEEVEQRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVTMLKKHQIMEQAVEDYAETVHQLSKTSRGLVAAGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINSGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIADKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQ
VRQLQEDAARLQSAYAGDKADDIQRREGEVLEAWRSLLEACDGRRLRLLDTGDKFRFFSM
VRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHFASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSRELGRSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRRQQEEEERMRK
PPGPEPVLVQQDGPQQQSAVTQNGLPSDQDQDSPQDAVEGGGLVNGMVERGSKEPSPAPS
PTSARKSGGSQSATMPARSQEAPALLEGPLHRKHEWEGPNKKASNRSWHHVYCVIRGAEL
SFYKDGKAAAQGAPYHGEAAVGLKDAACDVASDYKKKKHVFKLRVSDGNEFLFQAKDEEE
MSSWIQAVLSAERPAPGAAPGTPPSGRAQTLPVSVSLPAESSPGKRDKEKRFSLFSKKKQ
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggcggccgagtacgacccgatggagctgcacggccagtacagcagc
agcgacaccgtcaacaaccgctgggacgacgactgggacaacgagaacagctccgcccgg
ctcttcgagcgatcgcgcatcaaggccctggcagatgaacgtgaagcggtccagaagaag
accttcaccaagtgggtcaactcccacctgtccagagtctcctgcaggatcaccgacctt
tacctggacctgagggacggccgcatgctcatcaagctgctggaggttctgtccggagag
aggctgccaaagcccaccaaaggccggatgcgcatccactgcctggagaacgtggacaaa
gcgctgcagttcctgaaggagcagcgggttcacctggagaacatgggatcccacgacatc
gtcgacggcaaccaccgactcactctgggcctcatctggaccatcatcctgcgcttccag
atccaggacatcagtgttgagactgaagacaataaggagaagcgatcggccaaggatgcc
ctgctcctgtggtgccagatgaagacggccggttattccaacgtcaacatccacaacttc
accaccagctggagagacggcatggccttcaacgccctcatccacaaacacagacctgac
ctgatcgacttcgacaagctgaagaagtccaacgctcactacaacttgcagaacgcgttt
aacctggcggagcagcacctgggcctcaccaagctactggacccagaagatatcagcgtg
gaccatcctgatgagaagtctgtcatcacctacgtggtcacctactaccactacttctcc
aagatgaaggcgctgaaggtggagggcaaacgcatcgggaaggtgttggacaacgccatc
gagaccgagaagatgatagagaagtacgagtcgctggcgtcggacctgctggagtggatc
gaacagaccatcatcatcctcaacaacaggaagttcgccaactccctggtgggagtccag
cagcagctgcaggccttcaacacgtaccggaccgtggagaaaccgcccaagttcacagag
aaggggaacctggaggttctgctcttcaccatccagagcaagatgagggccaacaaccag
aaggtctacatgccccgtgaggggaagctcatctcagacatcaacaaggcctgggaacgc
ctggagaaggcggagcatgagagggagctggctcttcggacggagctgatccgacaggag
aaactggagcagctggccagacgctttgaccgcaaggcagccatgagggagacctggctc
agtgaaaaccagaggctggtctctcaggacaactttggcttcgacctccaagccgtggag
gcggccaccaagaagcacgaggccatcgagacggacatcgcggcgtacgaggagcgtgtt
caggccgtggtcgccgtggcgaaggagctggaggcggagcgttaccacgacatcaagtgc
atcgcggccagaaaggacaacgtgatccggctgtgggagtacctgctggagctgctgaag
gcccgccggcagcggctggagatgaacctgggcctgcagagggtcttccaggagatgctc
tacattatggactggatggacgagatgaagatgctgctgctgtctcaggactacgggaag
cacctgctgggcgtggaagacctgctgcagaaacacgcgctggtggaggccgacatcgcc
atccaggccgacagggtgaaggccgtcgtcaacaacgccaacaagcactcggtggccgac
agcggctacaagccctgtgatcctcagatcatccaggaccgggtggcccacttggagttc
tgctaccaggagctgacccagctggccgctgagcgccgtgcacgtctcgaggaatctcgc
cgactctggaagttcttctgggaaatggcggaggaagagggctggatccgggagaaggag
cagatcctgtcctccatggagcacggcaaggacctgaccggggcggtgcgcctcctgagc
cagcagcgggccctggaggacgagatgagtggccgggccggacacctgcagcacaccatc
gctgagggccgggccatggtggatgccggtcactttggtgctaccaagatccaggagcga
gtctcagacctgaaggctcagtgggcggcgctggagcagcttgcagcagtgagaaagaag
agactggaggaagctctggccatgcaccagttccaggccgatgcggacgatgtggatgcg
tggacactggacgctctgcgcatcgtctccagtggagagacgggccatgatgagttctcc
acccaggctctggtcaggaagcacaaggatgctgcagcggaggtggccagctaccgttcg
gtcatcgactctctacatgagcaggtcgccctgctgcccaaagaggaggcggagtcagag
gtcgtgcagggccgcctagctggcattgaggagcgctacaaggaagtgtccgagctcacg
aagctgaggaagcaggcgctccaggatgcactggctctctacaagatgatgagtgaggct
gacgcctgcgaagtttggatcgacgagaaggagcagtggttgaacagcatggagattcct
gagaaactggaggacctggaggtgatacagcacaggtttgaaaatctggagccagagatg
aacaaccaagcgtctcgtgttgctgtggtgaaccagatcgcccgacagctgattcacagc
ggccatccgagcgagacaaacatcaggactcagcaggataaactgaacaacaggtggagc
cagttccgagacctggtggaccagaagaaggagtccctgaactctgcgctgggtgtgcag
aactatcatctcgactgcaatgagaccaaatcctggatcaaagaaaagaccaaactaatc
gagtccacccaggagctgggcaatgacctcaccggagtcatggctctgcagaggaagctg
accggcatggagcgagacttggtggccatcgaagacaagctgggtgacctgcggggtgaa
gcccagaggctggctgaggagcatcctgaccaggccaacgccatcacagaccggctggct
gagatcactgccgtctgggacgagatgaagaatactctgaaaacacgagaggagtccctg
ggcgaagccaggaagctgcagcagttcctgcgagagcttgacgacttccagtcctggctg
tcccgcactcagacagccatcgcctccgaagacatgcccaacacgctgtctgaggccgag
aagctgatggctcaacacgaaagcatcaaaaatgagatccacaactacgaggaggactac
cagaagatgagagacatgggggagatggtgacgcagggccaggtggacgcccagtacatg
ttcctgaggcagcggctgcaggcgctcgacaccggctggaacgacctgctcaaaatgtgg
gagaaccggcagaacctgctgtctcagtcgcacgcctaccagctgttcctgagggacacc
aagcaggcagaggctttcctcaacaaccaagagtacgtgctggctcacacagagatgccg
accaccctggagggcgccgagggcgccatcaagaagcaggaggacttcatgaccacaatg
gacgccaacgaggagaagatcaacggtgtggtggaggcaggcaggaggctggccggtgac
gggaacatcaacgctgagcgcatccttgagagagtggcctccatcgacgacaggcacaag
aagaacagggaggcagcagtggagctgctgatgagactgaaggacaaccgcgatcttcag
aagttcctgcaggactgccaggagctctctttatggatcagtgagaagatgctgacggct
caggatatgacctacgacgaggccaggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggccgagctgcagtccaacaaggagtggctggacaagatccagaaggatgggacg
ctgctggtgtcagagaagccagagacggaggaggaggtgaaggagaagctggcgtcactc
cacaccttgtgggagaagcttgagtccaccactcagaccaaagctcagggtctgtttgac
gccaacaaggccgagctgtttacacagagctgtgccgacttggacaagtggctgggcagc
ctggagggccagatccagtccgacgactacggcaaagacctgacatctgtcaacatactt
ctgaagaaacagcagatgctggagaaccaggtggatgtgcgccagagggaggtggtggag
ttgcagagccaagtgaaggcccttggtcaagaggtgaaggacacagatgaggtggacggg
aggagacgggtggtggagaagaagttccaggagctgctggagccactgcggtgtcgcagg
gacttcctggtggcatccagagaagtccatcagttcaaccgtgatgtggaggatgagctt
ctctgggcccaggagaggatgccagtggccacatccactgagcatggacacaacctgcag
acagtccagctgctcatcaagaagaaccagacgctgcagaaggagatccagggccatcag
cctcgcatcaacgacatcctggagcgcagccgcagcctactgcaggacaagtcctccaac
accgacttgatccggcagcgcctggccgacctgcagcagctgtggaaggagctgatggag
gaggtggagcagcggcacggccgactggaggaggcccacaaagctcagcagtactacttt
gacgccgctgaggccgaggcttggatgagtgaacaggagctctacatgatgtcagaggag
aaagccaaggacgagcagagcgccgtaaccatgctgaagaagcatcagatcatggagcag
gctgtggaggactacgcagagaccgtccatcagctgtccaagaccagccgaggactagtg
gctgccggacaccctgaaagcgagcggatcagcatgcgccagtctcaggtggacaagctg
tacgccggcctgaaggacctgtctgaggagaggcggggcaagctggacgagaggctccgc
ctcttccagctcaacagggaggtggacgacctggagcagtggatcgccgaacgggaggtg
gtggccgggtctcacgagctgggccaggactacgaacatgtcacgatgctacaggaacgt
ttccgggagtttgcgcgggacaccgggaacatcgggcaggagagagtggacgccgtgaat
cggctggcggacgagctaatcaactccgggcatggcgacgcggccacggtggcggagtgg
aaggacgggctgaacgaggcctgggccgaccttctggagctcatcgacactcggacgcag
atcctcgccgcctccttcgagctccacaagttctaccacgacgccaaggagatcctggga
cgcatcgcagacaagcagaagaagctgccggaggaggtcggtcgggaccagaacacagtg
gagacgctgcagaggatgcacaacaccttcgaacacgacatccaggcactgggaacacag
gtgaggcagcttcaggaggacgccgcgcgcctgcagtcggcatacgccggagacaaagcc
gacgacatccagcggcgggagggtgaagtgctggaggcgtggaggagcctgctggaggcc
tgcgacggacgcaggctccgcctcctcgacaccggggacaagttccggttcttcagcatg
gtccgcgacctgatgctctggatggacgacgtgatccggctcatcgaggcccaggagaag
cccagagacgtttcctccgtggagctgctgatgaacaaccatcagggcatcaaagcggag
atcgacgcccgcaacgacagcttcacagcctgcatcgagctgggcaaggccctgctggcc
cgcaagcacttcgcctcagaggagatcaaggagaagctgctgcagctcaccgacaagagg
aaggagatgatcgacaagtgggaggaccgctgggagtggctccgcctcatcctggaggtg
caccagttctcgcgggacgcgggcgtggccgaggcctggctgctgggccaggagccctac
ctgtccagccgggagctgggccgcagcgtggacgaggtggagaagctcatcaagcgccac
gaggccttcgagaagtccgccgccacctgggaggaacgcttctccgccctggagcggctg
accacgatggagctgctggaggtcaggaggcagcaggaggaagaggagaggatgaggaag
ccaccgggtccagaaccggttctggtccagcaagacggaccccagcagcaaagcgccgtg
acccagaacggactcccatcggatcaggaccaggactctcctcaggacgccgtggaaggc
ggcggcctggtgaacggcatggtggagcgcggatccaaggagccgagccccgccccttcg
ccgacctcggccaggaagtcaggcggcagccagtcggccacgatgccggcccgcagccag
gaggcgccggccctgctggaggggccgctacaccgcaagcacgagtgggaggggcctaac
aagaaggcgtccaacaggtcctggcaccacgtgtactgtgtgattcgcggcgcggagctg
agcttctacaaggacggcaaggcggcggcccagggcgccccgtaccacggggaggcggct
gtcggcctgaaggacgccgcctgtgacgtagcctccgactacaagaagaagaaacatgtc
ttcaagctcagagtctccgatgggaatgagtttctgttccaagccaaagatgaagaggag
atgagctcgtggatccaggctgtgctgagcgctgagcgccccgcccccggcgccgccccg
ggcacgccgccctccgggcgcgctcagacgctcccggtcagcgtgtcgctacccgccgag
tcgagcccggggaaacgggacaaggagaaacgcttcagcctgttcagcaagaagaaacag
tag
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integrated database retrieval system
