Xiphophorus maculatus (southern platyfish): 102225954
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Entry
102225954 CDS
T02923
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03440
Homologous recombination
xma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102225954 (brca2)
03460 Fanconi anemia pathway
102225954 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102225954 (brca2)
03036 Chromosome and associated proteins [BR:
xma03036
]
102225954 (brca2)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102225954 (brca2)
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102225954 (brca2)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
102225954 (brca2)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102225954 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
102225954 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
102225954
NCBI-ProteinID:
XP_023207005
Ensembl:
ENSXMAG00000006974
UniProt:
M3ZXN9
LinkDB
All DBs
Position
18:complement(8799871..8815382)
Genome browser
AA seq
3052 aa
AA seq
DB search
MDSCIQNMYDAFKDEIWKELGPLDPNWFEVLTAQASLNEGNVADNDELCANQEGYFKVPL
EKTAVESQLFSTPKVFRHCQIVSPDTEDDTSFTAAQEKEMLPWMPTQSPCLFQPPKLCVS
NLKCEGVQPQTEASFDLLHSPEKSPASYANHISESLGAQINPDISWTSSFNTPRALPSTL
ILSKTDESPCPESVTADRKVVFVRKLFPSLSNSSLNTSRTSLGPVFPVTDTCSKSPLNQS
ESHQQQKVPDALEGDVCSADAPRSFFANSSSALRKVKPDRVKRKQIIQTNVDVCSHEDTS
KSDNAASSEEDLESGGLPSTTLVKTGDTAISQWSPLSLSEISSSAVGSNMTLPGYTDSVQ
PTRPTLKITDSGFTQKKRKFVYTITTTKSQACGQDFQTTDPSLKISESEQENGKPFVNTP
DKEECQRTKNQRNIVEETINCSLGTKLQDIDMSQLCRDFAQDFSQMTDLKTGENTQRNFS
PAACLSAMKQTKQNGKPANFPNDYSCISKNRCIPTSNQPFSISEVTMIDSGFQSGVADVT
HMTSSSFGLPLLENVGQNQPKQSFKTGMHNFPSTNGSGKPKFDVEVPVQRSGTGQAPDHA
KEIELHIASISTEELWDREETVGESKSSQPQTTPVSLLPADASGFKTASNKGIHISHANL
EKAKRFFEATEDKKSSLDNSTKSYHGIIYKSNSICEKTTDTSSDSSLPACAGKSFGNVSS
QLTASEKADVTELCSLLEEADSQFEFTQFKSTKKLPNHQDNHNPPQKEDKDLDPALADID
FDDSFSSEGGKHSTVMMNDKVASVLENRTHGETAKAINRCTGMSDLLKTETHLNSLSGTI
SEEREFLKLDEPNILPRAEDTETRYLENNKALIHSEAFRTAGGNVLHVSKKCLNKAKALF
ADLERNLTDQKLSDKQNGKNAAITEQKCNRDSDTFRKDSERKKENWDVGSKIENCFSKLE
GVVCSNKNVGNRNDTKSVKNNEIDTIICENGFRKASGKGISISANYMQEADAFFKDCHVM
EHKEGKKSFSNFKSPQVSISKKSVTRCTELENVNTAMVSHHTKERRLNEVERNSKFTAAL
KNEDGKSFPTSKPFAMLHPSKSTDLSAFEELCAGDGFCTAAGKNISVSAAAMKKDESLLN
QIHAPEEINKETNEKENASKTKCLGDELSNLDAGGFQVVNGKKFAISSAPLKKATLLRES
DKSEDAICISSQQSSPKTPVIPVTNLWSGGFSAASGKPVVLSSVALEKTQTLVSDISLNM
DKVAESAPVKKDKKHQTEPEKICSGFTTAGGANDQMSQEKFDDLILAKAVQEEDALSTDG
VLESNNVMLESVGSKKEDEKPHADQRFRTHTPVEAVKGCFKDADKQEKHKENLLPQASCG
FKTASGKKVEVSFEALKKAENLLGDCVGVMDRVNAALPESKAIDLPVRNDGFQSASGKPV
ALSSEALQKAKSLFSDIGFRAEDPDTSQMRKSGKNQDGSNNTEKMSCGFTTARGEKVDVL
QKNLQKAKALFKELDDQVLSKAAQEEDAFFAGCDMDINKEMLENDLKDKVHMQRSRKASL
AKCYTDDEMRVSISIPECSSNANKQVEQRENILPQASRGFQTASGKRVDVSSEALKKAET
LFSEFEGIQDKTNAMSSQSQSSALSLRNCGFHSASGKPMASSTEAVQKAKSLFCDITSSM
EDSDFSQTVKADGKQDSRSKTQKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLALTK
AMQDTDPFFNQEEGWTMDSNSEKSSEQTNTAPVNESGSIKGNMSELRTNTGSICEEPESG
SIKAKQNEGGFQTASGKTVAVSAEALSRAKLLLSENKVDEESTCVCATSGKPFSHEALQK
AKTYFSSGVESLPSAADSRSDDHIEEKSHLSICNLNTKSCNQRSDIIQTNKSSDPKFQLL
NLTGCTETQQKFLAQEALDCTKALLEDEVLVGQSLLTTSEDLQLLDDQHLNKKSAEEDKG
RKRRRAEDLIAQPPSKRRLLEEFDRTAENSRGSGLHPVKSGPNGIMDRGVFRCGAFLHPN
ITKPNRDAKSFVHTRLQRTIQMPHSDQGDGRSVACRMPTFVPPFFKNSKRDALNKPEARD
CKKVPAFVPPFKKQRVVHEESSPKQQEDNKQHHSLCLETNSKTDAPLTKTTQNCEEVVTL
VNTPNTKMINQSVPLKVGSVSSTEMLHVDDKLSRSQDRTENIGLARDMQDMRIRKKKRQT
IRPLPGSLFLTKTSGVARIPLKVAVNGNIPSRYSAQELYECGVHKYVPEITGENAESFRF
NLLQFVKQEMLADGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTAGVDPKLISEQWVYN
HYRWIVWKQASMEKSFPETMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDTP
AKTLVLCVCEIISKGQLLHAQICSDTKMSQSAKTKVETPVAVVRLTDGWYAIKAQLDEPL
TAMLHKGQLAVGGKLIIHGAQLMGPQDGCSPLEAPDSLMLKIWSNSTRRARWDAKLGFHT
DPRPFLLPVSCLYSNGGPIGCVDIVILRSYPMQWMERKSDGGVVFRSARAEEKEARRFNS
HKQKAVELLFAKVQAEFEKEEEGSIKCQRRRQMVGKQDIGNLQEGEDLYEALGDDPAYLE
AHLSEQQLESLQAYRRSLMEKKQAELQDRYWRALDAEDNEMSCPKRDVTPVWRLCIADSR
IQSSCVVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKPSNVETVQLTGTKKTQFQE
LQVSQEWVSSHFRQRISTDFVNLQNEEFKPLCGEVDLTGLVISVVDQQGSSPAFYLVDGK
KNFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQSIHPTPVLYAGDLTVFSTNPKEI
HLQESLDQLRNVVQGQDNFFLTAEEKLAHSIKSDGSCSSSLQPEMPVAARRQDSKTNVAF
LKPIKSLGSFTPVSSNLPAATSSIEKDPKSLKRKRALDYLCRIPSPPPIFPLASVVSPCV
KKTFNPPRRSGPPSTLKPATIKATDSLVEDEWVNDEELAMIDTQALHVGNLF
NT seq
9159 nt
NT seq
+upstream
nt +downstream
nt
atggattcatgcatacaaaacatgtacgatgcatttaaagatgaaatctggaaagagctg
ggacctttggacccaaactggtttgaggtactgacagcccaagcttctttgaatgaagga
aatgttgccgataacgatgagttgtgcgccaaccaagagggatatttcaaggttcctctg
gagaagacggcagtagaaagccagctgttttcaacccctaaagttttcagacactgtcaa
attgtgtcgccagacaccgaggatgatacgtcgttcacagctgcgcaggaaaaagaaatg
ttaccatggatgccaacacaaagtccctgtttgtttcagccgccaaaactgtgtgtctct
aatttaaaatgtgaaggtgttcagcctcagactgaggcgagttttgatcttctgcattcc
ccagagaaatcccctgccagctatgccaaccacatttctgaaagtctcggcgcacagatc
aatcctgacatttcttggaccagttcttttaatacaccacgagctttgccatctactcta
attttatctaaaactgatgagagtccctgtccagagagtgttactgcagacagaaaagtt
gtttttgtacggaagcttttcccttcactttcgaattcctcccttaacacatcaagaact
tccctaggtccagttttccctgtgactgatacctgctccaagtctccattgaaccagagt
gaaagtcatcaacaacagaaagttccagatgctctggaaggagacgtttgtagcgcagat
gcacctagaagtttctttgctaatagtagttctgctctgagaaaagtgaaacctgacaga
gttaaacgtaagcaaataattcaaacaaatgtagatgtctgcagccatgaagatacctca
aaatcagacaatgctgcatccagtgaagaggatctggaatctgggggtttgccttcaacc
acactggtgaaaactggagatacggcaatcagccagtggtctcctctaagtctatctgaa
atctcatcttctgctgtgggaagcaatatgacactgccagggtacactgactctgtgcaa
ccaaccaggccaacattgaaaattactgactctggatttactcaaaagaagagaaagttt
gtttacactatcacaaccacaaaatcgcaagcttgtggccaagacttccagacaacagat
ccctcactaaagatttcagagtctgaacaagaaaatggcaagccatttgtgaacacccca
gataaagaagagtgtcagaggactaaaaatcaaagaaatattgtagaggaaaccataaat
tgctctcttggaacaaaactccaggatattgacatgtcacaactttgtcgagattttgca
caggacttcagccaaatgacagacttaaaaactggggagaacacgcaaaggaacttctct
cctgcggcgtgtctgtctgctatgaaacaaacaaaacagaacggaaagccagctaacttt
cccaatgattacagttgtatcagtaaaaacagatgcatccctaccagtaatcaaccattc
tcaatcagtgaagtcactatgattgacagtggattccaatcaggtgtagcagacgtcacc
catatgacttcctcgtcatttggtcttccgctcttagagaatgttggccaaaaccaacca
aagcagagtttcaaaactggtatgcataattttccctcaactaatggaagtggaaagcca
aaatttgatgttgaagtgcctgtgcagaggtctggcacagggcaggctccggaccatgca
aaggaaattgagttgcacatagcgagcatatcaacagaggaattatgggacagagaagaa
actgttggtgaaagtaaaagcagccagccacaaacaactcctgtttctcttctgcctgct
gatgcatcaggattcaaaaccgcctcaaataaaggcatccacatatcacatgctaacctg
gaaaaagcaaagcgtttttttgaagcgactgaagataaaaagtcttctcttgataacagc
accaaatcctatcatggcattatttataaaagtaattcaatttgtgaaaaaacaacagat
acatcatctgactcaagcctgcccgcctgtgctggaaagtcatttggaaatgtcagttcc
caattaacagcctcagaaaaagccgatgtgacggaactttgcagtctcttggaagaggca
gacagccaatttgagtttacacagttcaaatctacaaaaaagctaccaaatcatcaagat
aatcacaatcctccacaaaaagaagacaaggatcttgaccctgctcttgcagatatagac
tttgacgatagctttagttctgaaggtggaaagcactccacagtcatgatgaatgacaaa
gtggcctcagttttagaaaacaggacacatggagaaacagcaaaagccataaatcggtgc
acaggaatgtcagatttgctgaaaacggaaactcatttaaattctttgtcaggaaccatt
tctgaagagagggaatttctaaagttagatgaaccaaatattcttcctcgggctgaggat
actgaaactagatatctggagaacaacaaggctttgatccatagtgaggcatttaggaca
gcaggtggaaatgttttgcatgtctctaaaaagtgtctgaacaaagccaaggctttgttt
gcagatttggagagaaatttgacagatcagaaactttctgataagcagaacgggaaaaat
gctgccataacagaacagaaatgtaacagggattctgacacgttcagaaaggactcagaa
agaaagaaggaaaactgggatgtcggaagcaaaattgagaattgcttttccaaattagaa
ggggttgtctgttcaaataaaaatgttggaaacaggaacgacaccaaaagtgtgaaaaat
aatgaaattgacacaataatctgtgaaaatggattcagaaaggccagtgggaaaggaatc
tccatttcagctaactacatgcaagaggcagatgcatttttcaaagactgccatgtaatg
gagcacaaagaaggtaagaaaagcttttcaaacttcaaaagccctcaggtcagcatttct
aagaagagtgtcactagatgcactgaacttgaaaatgtaaatacagccatggtctcacat
cacacaaaagaacgacgtctgaatgaagtggaaagaaatagcaagtttacagcagctttg
aaaaatgaagacggaaaatcttttccgacttcaaagccgttcgctatgcttcacccatca
aagagcacggatttgtctgcttttgaagagctgtgcgcaggtgatgggttttgtacagct
gctgggaagaacattagtgtgtctgctgctgctatgaagaaggatgaatctcttttgaat
cagattcacgcacccgaggagataaacaaagaaactaatgaaaaagaaaatgcttcaaaa
acaaaatgccttggtgatgagctatcgaacctagatgctggtggtttccaagttgttaat
ggaaaaaaattcgcaatttcatcagcacctttaaagaaagcaactctgctaagagaatct
gataagtcagaggatgccatttgtatttcctctcagcaatccagtcccaagacaccagtt
atcccagttactaatctctggagtggtggtttttctgcagccagtggcaaacctgttgtc
ttgtcatctgtggccttggagaagactcagacactggtcagtgatatcagtttgaacatg
gataaggtggcagaatctgctccagttaaaaaggataagaaacatcaaacagaaccagaa
aaaatatgctctggtttcacaactgcaggaggagcaaacgaccaaatgtcacaggaaaaa
tttgatgatttgattttagccaaagcagtgcaagaggaagatgctctctccaccgacggt
gttctggaaagcaacaatgtaatgttggagagtgtggggagcaagaaggaagatgaaaaa
cctcatgcagatcaaagatttagaacacacacacctgtagaggctgtgaaaggatgcttc
aaggacgcagataaacaagagaaacacaaagagaaccttttaccacaagcaagctgtgga
tttaagacagccagtgggaaaaaagttgaagtttcatttgaagctctgaagaaagcagaa
aacttgttaggtgactgtgtaggagtcatggatagagtgaatgcagcactgccagaatcc
aaggctattgatcttccagtcagaaatgatggatttcaatctgccagcggtaaacctgta
gcactttcatcagaggcccttcaaaaggcaaaatctctcttcagtgacatcggtttcaga
gcagaggacccagatacttcacagatgaggaaaagtggcaagaatcaagacggtagcaac
aatacagagaaaatgtcttgtggtttcacaactgcaagaggggaaaaagttgatgtgttg
cagaaaaatcttcagaaggcaaaagcacttttcaaagaacttgatgatcaggttttaagc
aaagcggcacaggaggaagatgctttctttgcaggatgtgatatggacattaataaggaa
atgttggaaaatgacttaaaagataaagtacatatgcagagaagcagaaaggcaagtctt
gcaaaatgttatacagatgatgagatgagggtgagcatttctatccctgagtgctccagc
aatgcaaacaaacaagtggaacaaagagaaaacattttaccgcaagcaagccgtggattt
caaacagccagtgggaaaagagtcgatgtttcttctgaagccctaaagaaagcagaaacc
ctgtttagcgagtttgagggaattcaggataaaacaaatgcaatgtcatcacagtcccag
tcttctgctctttcactcagaaactgtgggtttcattctgccagcggtaaaccaatggca
tcttccactgaggctgttcaaaaggcaaaatccctcttttgtgacatcacttccagtatg
gaggactctgatttttcacagacagtaaaagcagatgggaaacaagacagtcgaagcaaa
actcagaaaatatgttgtggttttacaaccgcaaagggagaaaaagttgatgtgtcgcag
aaaaatcttcaaagggcaaaattcctcttcaaagaagttgatgatttagctttaacaaaa
gcaatgcaagatacagatcctttttttaaccaagaggaaggttggactatggacagtaac
agtgaaaaatcatcagaacaaactaatacggcacccgttaatgaaagtggcagcataaag
ggaaacatgtctgaactcagaacaaataccggtagtatttgtgaagagcccgaaagcggt
tccatcaaagcaaaacagaatgaaggtggatttcagacggcaagtgggaaaacggttgct
gtttcagctgaggctctgtcgagagcaaaacttctgctgagtgaaaacaaagtagatgag
gagagcacttgtgtttgtgctacaagtggtaaaccattttcacatgaggccttacagaaa
gcaaagacttactttagcagtggagtggagtcattaccttcagcagcagacagccgaagt
gatgaccacatagaagaaaagtcacacttgtcaatttgcaatttaaatactaaaagctgc
aaccagagatctgacattatacaaacgaataaatcttcagacccaaaatttcagttgctt
aacctcactggctgtacagaaacacagcaaaagtttcttgcccaagaagctttagattgt
acaaaagccttactagaagatgaagttctagttggtcaaagtctgttgacgacttcagaa
gatttgcaactgctagatgaccaacatttaaacaaaaaatcagctgaagaggacaaaggg
aggaaaaggagaagggctgaagatctcattgctcagccaccttctaaacgaaggttactg
gaagaatttgatagaaccgctgaaaattcacgaggttcaggactccacccagtgaaaagt
ggcccaaatgggataatggacaggggtgttttcaggtgcggcgcctttcttcatccaaac
attacaaagccaaacagggatgcaaaaagctttgtgcacacaagattacaaaggacaatc
caaatgccgcattctgaccaaggagatggtcgatctgtagcctgcaggatgccgacattt
gtcccaccatttttcaaaaactcaaagagagatgcactcaataaaccagaggccagagac
tgcaaaaaagtgcctgcgtttgttccaccgttcaaaaaacaaagggttgtccatgaagaa
agttcccctaaacaacaggaggacaataagcagcatcactctttatgtttggagaccaac
agcaaaacagatgcaccacttactaaaacaacccaaaattgtgaagaagttgtcacttta
gtcaacactccaaacactaagatgattaatcaaagtgttcctctaaaggtgggatctgtc
agctctactgaaatgctacatgtggatgacaagctttccagaagccaagacaggactgag
aacattggactggcccgggacatgcaggacatgaggattaggaaaaagaagcggcagacc
attcgaccgctgcctgggagcttatttctgacaaaaacctcaggggtggcgagaatccca
ttaaaagttgcagtcaatggaaatattccttcaagatactcggcccaagagctgtatgag
tgtggagtccataagtatgttccagagatcaccggagagaacgctgaatcatttcgcttc
aatttgctgcaattcgtcaaacaagaaatgttagccgatggaggtggtgttcaactcgct
gacggaggctggttgatccccagtgacgactggacagcaggaaaagaagaattctataga
gcattatgtgacactgctggagtggatcccaagctgatcagtgagcagtgggtgtacaat
cactacaggtggattgtgtggaagcaggcctccatggagaaatcatttccagaaacaatg
ggcagcctttgcctcaccccagagcaggttctcctccagcttaagtacagatatgacgta
gaggtggaccacagccgcagaccagctttgaggaagatcatggaaagagatgatacgccg
gccaaaactcttgttctctgtgtctgtgagatcatctctaaaggtcagctcctacatgca
cagatctgcagtgacaccaagatgtcacaaagtgctaaaaccaaggtggaaactccagtt
gcggtcgtgcggcttacagatggctggtatgccatcaaagctcagctggatgaaccattg
actgcaatgcttcacaaaggtcagcttgctgttggtggcaaattgataatccatggagca
caactgatgggaccacaagatggttgctcccctttggaggcaccggattctttaatgttg
aagatatggtccaatagcactaggcgtgcacggtgggatgctaagctgggatttcacaca
gatccacgaccatttctgcttccggtctcctgcttgtatagtaatggaggaccaatagga
tgtgttgacatcgtcatactgagaagctatcccatgcagtggatggagaggaaatcagat
ggaggtgttgtgtttaggtccgctcgggcagaagagaaggaggcgagacgattcaacagc
cacaaacagaaagcagtagagttgctgtttgccaaggttcaagctgaatttgaaaaagaa
gaagaagggagtatcaaatgtcagcgcagaaggcaaatggttggcaagcaggatattggg
aacttgcaggaaggagaagacttgtatgaagcacttggagatgaccctgcttacttggag
gctcatttaagtgaacaacagctggagagtcttcaggcctacaggcgctcactgatggag
aagaagcaggctgagctgcaggacagatattggcgtgctctggatgcagaggacaatgaa
atgagctgtccaaaaagagacgtgacacctgtatggagactttgcatcgctgactcaagg
attcagtccagctgcgtagtttatcagttaaacctttggcggccttcttcagatctccag
tctttgctgaaggaaggtcgtcgattcaaagtgtataaccttgttgcctctgatggaaag
aaacctagcaacgttgaaactgttcagctgaccgggacgaagaagacacagttccaggaa
cttcaggtgtcacaagaatgggtgtcctcgcattttcggcaaagaatctccacagatttt
gtaaatcttcagaatgaggaattcaagcctctgtgtggagaagttgatctcacaggatta
gtcatcagtgttgtagatcaacagggttcctcgcctgcattttatttggttgatgggaaa
aagaattttgtgaaagtgcgttgcttcagcagcttgtctcaggccggccttgaagacata
gtgaaaccacgtgttcttttggcactgagtaacctgcagctcagaggccagtctatacac
cccactccggttctgtatgctggggatctgactgtcttctctacgaaccccaaggagatt
catctacaggaatccctcgaccaactcagaaacgtggtacagggtcaggacaacttcttt
ttgactgctgaggaaaaacttgcccattcaatcaagtctgatggatcctgctcttcatcc
ttgcaacctgaaatgccagtcgctgcaagaagacaagactcaaagacaaacgtggccttt
ctgaaaccaatcaaaagccttggatcatttacacctgtcagcagtaaccttcctgctgca
acatcttcaatagaaaaagaccccaaaagcttgaaaagaaaaagagctttggattatctt
tgtcgcatcccgtctccaccacccatcttccccctggcctcagtggtgtctccttgtgta
aaaaaaacattcaacccacctcgaaggtctgggcctcctagcactttaaagcctgctaca
ataaaagcgactgattctctggtggaggatgaatgggtgaacgatgaggaactggctatg
attgatactcaggcgttgcatgttggcaatttattttag
DBGET
integrated database retrieval system
