Xiphophorus maculatus (southern platyfish): 102226119
Help
Entry
102226119 CDS
T02923
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102226119
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102226119
Membrane trafficking [BR:
xma04131
]
Protein recycling
Others
Others
102226119
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
102226119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
SNX17-31_F2_FERM
VirE3
USP7_C2
Motif
Other DBs
NCBI-GeneID:
102226119
NCBI-ProteinID:
XP_014329655
Ensembl:
ENSXMAG00000014739
UniProt:
M4AJY3
LinkDB
All DBs
Position
13:4027805..4041944
Genome browser
AA seq
561 aa
AA seq
DB search
MADVGDDEIRPAHPTASRYNGPVVGSSAGQNAATVTSGPRIVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGIAKGDRILEVNGVNVEGATHKQVVDLIR
AAEKELVLAVLSVPPQEADGLEGGEDVQPNYDYSDKQAVPISIPMYKHVEQHSERFVVYN
VYMSGRQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLEEYLE
RVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRIRKNSTTDQVYQAL
VLKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFSV
QEEELLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRTCEGY
NEVVFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWAEMQRWDTDEEGM
AFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEESDKDNKNCSNNEY
LPPLETQQKGWRPLGGEIATS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtcggagacgatgaaattcggccggctcaccccacggcgtcccgctacaac
ggtccagtcgtcggttcgtccgcgggccagaacgcagcaacggtaacgtctggtcctcgg
atagtgcggatcgtcaagtcggagtccggctacggcttcaatgttcgcggtcaggtcagc
gaaggagggcagcttcggagcatcaacggggaactgtacgctcctcttcagcacgtcagc
gctgttctgcccggaggtgcagcagaccgagcggggatagcgaagggtgacaggatcctt
gaagtgaatggggtgaacgtggaaggagcgacccataagcaagtggtggacctgatccgt
gcagcggagaaggagctggttctggccgttctgtccgttccaccccaggaagctgatgga
ttagaaggaggggaggatgtccagccgaactacgactacagtgacaagcaggcggtgccc
atttcaatccctatgtacaaacatgtggagcagcactcggagaggtttgtggtgtacaac
gtgtacatgtcaggcagacagctgtgctcgaagcgctatagagagtttgccatcctgcac
caaaacctgaagagggaattctcaaacttcaacttcccaaagcttcctgggaaatggccc
ttctccctgtccgaacagcagctggacgctcggcgcagaggcctggaggagtacctggag
cgagtgtgttctgtgcgggtgataggggagagtgacatcatgcaggagtttctctctgaa
tcagatgagaactacaacggagtcacagacgtggagctgcggatagcgctgcctgacaaa
accaccatctctgtgcggattcgtaaaaacagcacaacggaccaggtgtaccaggcatta
gtgctgaaggttggaatggacagcattatggcaagctactttgctctttttgaagtcatc
aaccattcttttgtgaggaaactcgctccgaacgagttcccccacaagctttatgtgcag
aactacacatccgccgttcctgggacgtgcttagcgctccgcaaatggctgttcagtgtc
caagaagaagagctgctcagagacaacccgctggcactacactactgcttccaccaggca
ctggacgatgtgaagaagggattcataaaaacagaggacaaatcctaccagctgcagaaa
ctggcagagcagcgcaagatggccacatacctgagcctgctgcggacatgcgagggctat
aatgaggtggtcttcccccactgctcctgtgactccaggcggaagggccatgtcatcacc
gccatcagcatccatcacttcaagctgcacgcgtgcaccgaggacggcacgctggagaac
caggtaatagcttttgagtgggcagagatgcagcgctgggacactgacgaggaaggcatg
gctttctgcttcgagtacgccagaggagagaagaaaccgcgctgggttaagatttttact
ccatatttcaactacatgcatgaatgcttcgagcgtgtcttttgtgagctgaagtggagg
aagcaggtggaggaagaggaatctgataaagacaacaaaaactgcagcaacaatgagtac
ctgcctcctctggagacgcaacagaagggatggcgccccctagggggggaaattgcaact
tcctaa
DBGET
integrated database retrieval system
