Xiphophorus maculatus (southern platyfish): 102226183
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Entry
102226183 CDS
T02923
Name
(RefSeq) clathrin heavy chain 1 isoform X2
KO
K04646
clathrin heavy chain
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04142
Lysosome
xma04144
Endocytosis
xma05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102226183
04142 Lysosome
102226183
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102226183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102226183
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102226183
Membrane trafficking [BR:
xma04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102226183
Exosome [BR:
xma04147
]
Exosomal proteins
Proteins found in most exosomes
102226183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
102226183
NCBI-ProteinID:
XP_005812383
Ensembl:
ENSXMAG00000000159
UniProt:
A0A3B5Q0N1
LinkDB
All DBs
Position
11:26226929..26256975
Genome browser
AA seq
1678 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDTAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVERKVSQPIEGHAASFAQFKIEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISAKHNVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHDATSGIIGVNRKGQVLSVCVEEENIIPYINNVLQNPDLALRLAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSMECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDAEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDAELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADHTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKELVKEAIDSYIKADDPSAYMEV
VQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGQEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHSRAVNFFA
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMLYASESKDVELAEELLSWFLQE
NKRECFAACLFSCYDLLRPDVVLETSWRHNIMDFSMPYFIQVMREYLSKVDKLETSESLR
KEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYAQPAAQPGFGYGM
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatccttcctattcgctttcaggagcatctacagctccaaaatttgggaatc
aatccagccaacatcggcttcagcaccctgaccatggagtctgacaaattcatctgcatc
cgggagaaagtgggggagcaggcccaggttgtgatcattgacatggccgaccccaatact
ccgatccggagacccatctcagctgacagcgccatcatgaaccccgccagcaaggtcatc
gcacttaaagcggccaaaacccttcagatctttaacattgagatgaagagcaagatgaaa
gcacacaccatgacagacgacgtgactttctggaagtggatctctctgaacacggttgct
cttgtgactgacaccgctgtttaccactggagcatggagggcgactctcagcctgtcaaa
gtttttgatcgccactccagcctggcaggctgccagatcatcaactaccgcaccgacgcc
aagcagaaatggctccttctcattggtatctcagctcagcaaaacagagtggtgggagcc
atgcagctctactccgttgaaagaaaggtttctcagcccattgaaggccatgctgccagc
ttcgcccagttcaagattgaaggaaacgcagaagagtcaactttgttctgctttgctgtg
aggggccaggctggaggaaagctgcacattattgaggtgggaaccccaccaactggtaat
cagccatttccaaagaaagcagtggatgtcttctttcctcctgaagcacagaatgacttt
cctgtggccatgcagataagtgcaaagcacaatgtggttttcctcattaccaaatatggc
tacatccacctgtacgacctggagactggaacctgcatctacatgaaccgcatcagtggg
gagaccatcttcgtcacggcgccacatgatgccacctcaggcattattggggtcaaccga
aagggacaggtgctgtctgtctgtgtggaagaagaaaacatcattccatacatcaacaat
gtgctgcagaatccagatcttgccctccgcctggctgtccgcaacaacctggctggagct
gaagagctctttgcacgcaagttcaacaatctgtttgctgctggcaactactctgaagct
gccaaagttgctgctaatgcaccaaagggaatacttcgcacaccggacaccatccgccgc
ttccagagcgttcccactcagccgggccagacctctccgttgctgcagtactttggtatc
ctgttggatcagggccagctcaacaagtttgagtccctggagctttgcagacccgtcctc
cagcagggacgaaagcagcttctggagaagtggctgaaggaagacaagttggagtgttca
gaggaactgggcgatctggtgaaggcggtggatccgaccttagccctcagcgtgtatctg
cgggcgaatgtccccaacaaggtcattcagtgctttgcagagactggtcagttccccaaa
attgtcctgtatgccaagaaggtgggctacaccccagactggatcttcctgctcaggaac
gtgatgcgcataaacccagagcaaggcctgcagtttgcacagatgctggtccaggatgaa
gagccattagcagacatcacacagattgtggacgttttcatggagtacaacctgatccag
cagtgcacatctttcctcctcgacgctttaaagaacaacagaccgtcagaagggccactg
cagactcgcctgttggagatgaacctcatgcacgccccacaggttgctgatgctatcctt
ggtaaccagatgttcacacactatgaccgcgctcacatcgcccagctgtgtgagaaggct
ggtcttcttcaaagggctttggagcactacacagacctgtatgatatcaagcgtgctgtc
gtgcacacacatctcctcaaccctgagtggctggtgaacttcttcggttcgctgtcggtg
gaagattcaatggagtgcctcagggccatgctctcagctaacatccgccagaacctgcag
atctgtgttcaggtggcttccaagtaccatgaacagctctccactcagtctctcactgag
ctcttcgagtccttcaagagcttcgaaggcttgttctacttcctgggctctattgtgaac
ttcagtcaggatgccgaagtccacttcaagtacatccaagctgcctgcaagacgggccaa
attaaagaggtggagaggatctgcagagagagcaactgctacgatccggagcgtgtcaag
aacttcctcaaggaagccaaactcactgaccagctgccgctcatcatcgtctgtgaccgg
tttgattttgtccacgatcttgtcctctacctgtacagaaacaacttgcagaaatacatc
gagatttatgtccagaaggtgaatcccagccgtctcccagttgtcgtcgggggcctcctg
gatgtggactgctctgaggacgtcatcaagagtctgatcctggtcgtcagaggacagttc
tccacggatgaactggttgcagaggtggagaagaggaacagactgaagctgctgctgccc
tggctggagtcccgcatccatgaaggctgtgaagaacctgctacccataatgctctggca
aagatctacatcgacagcaacaacaacccggaacgcttcctgcgggaaaacccgttctac
gacagccgtgtggtgggaaagtactgcgagaagagagaccctcacctggcctgtgtggcc
tatgagcggggacagtgcgaccaggagctcatcaatgtttgcaatgagaactctctgttc
aagagcttgtctcgctacctagtgagacgtagagacgctgagctgtgggccagtgttttg
ctggagagcaacccctacagacggccactcattgaccaggtggtccagacggctctgtcg
gaaacccaggaccctgaggaggtttcggtcaccgtcaaagccttcatgactgctgacctg
cccaatgagctcattgagctgctggagaaaatagtgttggacaactccgtcttcagtgaa
cacaggaatctgcagaaccttctgatcctgaccgcaatcaaagccgaccacacgcgtgtg
atggaatacattagcaggctggacaactacgacgctcctgatatcgcaaacatcgctatc
agcaatgaacttttcgaggaggcgttcgccatttttaagaagtttgacgtcaacacctca
gccgtgcaggtgctcatcgagcatatcggcaacctggaccgggcctatgagtttgcagaa
cgctgcaatgagcctgctgtgtggagccagctggccaaggctcagctccagaaggagctg
gttaaagaagccattgattcttacatcaaagctgacgacccgtctgcatacatggaggtg
gtccaggcagctgataagagcggtaactgggaggatctcgtcaagttcctccagatggct
cgcaagaaggctcgtgagtcatacgtggagacagagttgatctttgccttggccaaaacg
aaccgcctggccgaactcgaggaattcatcaacggacccaacaacgctcacattcagcag
gtcggcgaccgctgctacgacgagaaaatgtacgaagccgccaaactgctttacaacaac
gtctccaacttcggccgcctggcttccactctggtgcacttgggagagtaccaagccgct
gtggacggagcccgcaaggccaacagcacccgcacctggaaggaggtgtgctttgcctgc
gtggacggccaggagttcaggctggcccagatgtgcggcctccacatagtggtgcatgct
gacgagctggaggagctcatcaactattaccaggatcgcggctactttgaggagttgatc
accatgctggaggcggcgctgggcctggagcgcgctcacatgggcatgttcacagagctg
gccatcctgtactcaaagttcaaaccccagaagatgagggagcatctggagctgttctgg
tcccgagttaacatcccgaaggtcctgagagcggcagagcaggcgcacctgtgggccgag
ctggtcttcctttacgacaagtacgaggagtttgacaacgccatcatcaccatgatgaat
cacccaacagacgcctggaaggagggccagttcaaagacatcatcaccaaagtggccaac
gtagagctgtactacaaagcggtccagttctacctggagttcaagcctttgttactgaat
gatttgctgatggtgctctcccctagactggatcactctcgtgctgtaaacttcttcgct
aaggtgaaacagctgcctctggtcaagccatacctccgctcagtacagaaccacaacaac
aaatctgtcaatgaagcacttaacaacctcttcatcacagaagaggactatcaggctctg
aggacgtcaatagatgcctacgacaacttcgacaacatctcgctggcccagcgcctggag
aaacacgagctgattgagttcagaagaatcgctgcctacctcttcaaaggcaacaaccgc
tggaaacagagcgtggagctgtgcaagaaggacaagctctacaaggacgccatgctgtac
gcatcagaatccaaagacgtggagctggcagaggagctgctgtcctggttcctgcaggaa
aacaagagggagtgtttcgccgcctgccttttctcctgctatgacctgctgcggcccgac
gtggtgctggagacctcctggaggcacaacatcatggacttttctatgccatacttcatt
caggtcatgagggagtacctctccaaggtcgacaagcttgaaacctcagaatccctaaga
aaagaggaggagcaggcaacagagacgcaacccatcgtctacggaacacctcagctgatg
ctgacagcaggccccagcgtccccgtggccccacagcaagcttacggctacggctaccag
gcccctgcaggctacgcccagccagcagctcagccaggcttcggctacggcatgtga
DBGET
integrated database retrieval system
