Xiphophorus maculatus (southern platyfish): 102226252
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Entry
102226252 CDS
T02923
Symbol
slc35c2
Name
(RefSeq) solute carrier family 35 member C2 isoform X1
KO
K24357
collagen type XX alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FN3_Tor_3rd
VWA_2
NDNF
DUF4959
YjeF_N
Motif
Other DBs
NCBI-GeneID:
102226252
NCBI-ProteinID:
XP_014326962
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All DBs
Position
1:4212334..4255499
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AA seq
1566 aa
AA seq
DB search
MSSHLLASRPSSLRSMLCFLLSVFLLLSSGVHGQGRLKLTVLSEDRLQMKWKEADGPVQG
YKVRVRTMSEEQQPELMLTTTRGRATVAGLDSSQEYSLQVFVLNGTTEKLLAKRRFTLEG
LREEEMIRSGSRENRRKLIPGGSASGDLDDSTAVLLDRPTVLFPEPTLTTAATVSTAEPS
ATESASEYPDEPPEKSTREKRKRKKEKEQHSSTVENKEEHGMKQGFPQRKPYECESDTAA
DIMLLVDGSWSIGRTNFRRVRDFLEGLVTPFNIGPNHIQIGLTQYSGDPRTEWHLGNFTT
KEQLLEAVRNFRYKGGNTFTGQALLHVMEENMKPKAGARASAPFFLVLLTDGKSQDDAIA
AANRLKNAGVEIIAVGVKNADEAELRQVASEPVDLNVYNVNDFPLLSKLVARLVHILCRR
IEDRGISKRMEPAPTTQPGLSFPSPTDLRFSQLGSRQVKLHWTNPAQPVQQYRVVYHSAE
SQSPQEVVLSGSESTVLLDGLSSQTLYHISIFPVYTSSVGLALRGTVTTLPLAMPTDLEV
TPSSYSTLQVSWSPAPGATHYMILYSALSDGEPEDAKEEKFSAGQTVVELAGLLPETDYS
VTLYALYDEEPSDPVTSVSRTLPLPAPVGIHFPIVTHSMIKVSWVPGAVDVPGHRITYST
NHGSDTKQMEVKDQNSVVLQSLSSLSRYLVSVQSQYPQGLSATLTSNVTTLKVPSPSDLK
VTNFSGSEIMVRWAAAADDVVYYLIKWISLSEGDLRQLKVNGDNEGAILEGVEEDKEYQI
SLSALYGDGAQSEAVAIRYSTLSGGGPSSVSVSEETAVSMLVNWVPPNAHVLQYRVSYTP
LTGAETQDGTVLVPGGHKQVVLESLQPDTRYSILVTAEYRNREGGSGSAQGKTASLRVSS
ISVVRSDHSSVCLSWRPVLAVNGYRVVIQSVKDKQVKQETVSETTNSYCFNHLEPETLYR
ISVHSLLGSAEGAAVSILHPTAPAPARIPIPPRIYPVHNEVCPEVTIQNGIVKGFNMMEA
FGLTRKAHSSVEGVSAEPFVFNTMPAYTVYRDVQLTQSTKFIHPAGFSPEHTISITFRLL
QDTPMEAFALWQLTDNDFQPKMGVVIDPSSQLLMYFSLDYRGEVQELTFDQPQVHKIFYG
SFHKVHLSVSQVSVSLSVDCQPVGERPARPLGNLPTDGFEMLGKLVKTRGPKSGSAPFQL
QSFEIICNNTWASMDTCCDLPGVRDEESCPAPPYACTCSSNVQGAPGPPGPIGKPGPRGE
KGDKGEQGSKGEVGPPGKAGFEGGLGPVGSIGPRGITVQGKIGPPGARGEKGDPGRPGVQ
GSPGPPGSKGEEGIPGPRGIRGVEGNIGAPGITGTRGFQGLPGYPGPVGERGPFGPVGPT
GLPGNKGERGEKGEPQSMAMIYQLVTQACEQLVHKEVLKLDMYINEISRKPVPIEEPVGP
PGEPGIPGSRGPPGARGNQGSVGSRGRPGRPGYPGEQGRRGIPGEKGSLGNNVQGPSGIK
GLAGPPGESKPGVPGPKGNDAKPGPPGTTGPSGQPGEIGPQGMCDSSGGCQNVPQQTEDP
YYDYQP
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcacctccttgcatccagaccatcgtctctaaggtcaatgctgtgtttcctg
ctcagtgtcttcttgctgctgtcctcaggagttcatggccagggtcgtctgaagctgacc
gttctgtctgaggaccgattgcagatgaagtggaaagaggctgatggtcccgttcaagga
tacaaagttcgggtcagaacaatgtcagaagagcagcaaccagagctgatgctgaccacc
acccgaggccgggcaacagtggcgggactggactccagtcaggaatactccctccaagtc
ttcgttctgaacgggacgacggagaagcttctggcaaaaaggcgattcactttagagggt
ctgcgagaggaggagatgatccgcagcggtagccgtgagaaccgtaggaagttgatccca
ggcgggtcggcctcgggggacctggacgattcgacggctgttctgctggaccggccaaca
gttctgtttccagaacccactcttaccactgctgccaccgtctcaactgcagagccctca
gccacagaaagcgcttccgaataccctgatgagcccccagagaaaagcaccagagagaag
aggaagaggaagaaagagaaggagcagcatagttccacagtggaaaacaaggaggagcat
gggatgaaacagggctttccccagaggaagccatatgagtgtgagagtgacacggcggca
gacatcatgctgttggttgacggttcctggagcatcggacgcaccaatttcaggcgggtc
agagacttcctggagggtctggtgacgccgttcaacattggaccaaaccacattcagatc
gggctgacccagtacagcggagaccctcgcaccgagtggcacctgggtaacttcaccaca
aaagagcagctgttggaggcagtgaggaatttcagatacaaaggaggaaacacatttaca
ggacaggcactgctccacgtcatggaggaaaacatgaagcctaaggcaggagcgcgagcc
agtgcgccattttttctggttctgttgactgatgggaagtctcaggacgatgccattgca
gcagctaaccggctgaagaatgcaggcgtggaaatcatcgctgtaggtgtgaaaaatgca
gatgaagctgaattgaggcaggtggcatcagagccagttgacctgaacgtctacaacgta
aatgatttccccctgctcagcaagctggtcgctcggctggttcacattctgtgcaggagg
atagaggaccgtggcatctcaaaacgaatggagcctgcacccaccacacagccaggcctc
tcctttcccagtcctactgatctgcggttttcccaacttggatccagacaagtgaagctg
cactggaccaatcctgcccagcccgtccagcagtacagagtggtttaccacagtgctgag
agtcagagtccacaggaggtggttttatccggctctgaatccactgttctgctcgatggc
ctctcatctcagacactctatcacatctccatattccctgtgtacaccagcagcgttggc
ttggccctcagaggaactgtcactacattgcctctggctatgccaaccgacttggaagtg
actccctcctcttacagtactctgcaagtaagttggagtccagctcctggtgcgactcat
tacatgatcctatactcagcactcagcgacggagagcctgaagatgcaaaggaggagaaa
ttcagcgcaggccagacagtggtggagcttgcaggcttgctgccagaaacagactactct
gtcactctttatgctctctatgatgaagagcccagtgatccagtcacttcagtttcccgc
acactacccctcccagctccggttggaattcacttcccgattgtaacccacagcatgata
aaggtgagctgggtccctggtgctgtggatgtcccaggccacagaatcacctacagcacc
aatcatggcagtgacaccaagcagatggaggtcaaagaccagaactctgtggtgctgcaa
agcctttcatctctgtcccgatacctggtttcagtacagtcccagtacccgcaaggcctg
tctgccacactcaccagtaacgtcacaacactgaaggtgccttctccatcagatctcaag
gtgactaatttctcgggcagtgaaattatggtacgctgggcagcagcagcagatgatgtt
gtctattacctcatcaaatggatctctttaagtgaaggagacctgaggcagctgaaggtg
aatggagacaatgaaggagcgatcctggagggagtggaggaggataaagaataccagatc
tctctgtctgcactttatggagatggagctcagagtgaggctgttgccattcgatacagt
accttgtcgggcggaggcccgtccagtgtatccgtgtcagaagaaactgcagttagcatg
ttggtcaactgggtgcctccaaatgctcacgtcctccagtaccgggtttcttacacacca
ctgaccggagctgagacccaggatggaactgtgttggtccccggtggtcataagcaggtg
gtgctggagtcattgcagccagatacacgttatagcatcttagtcactgcagagtatcgc
aacagagagggaggcagtggctcagctcaaggcaaaaccgccagtctacgtgtgagcagc
ataagcgtcgtcaggtcggaccactccagtgtctgtttgtcctggaggcccgtgttggcg
gtcaatggataccgtgttgtcattcagtcagttaaagacaagcaagtaaaacaggaaact
gtgagtgagaccaccaatagctactgcttcaaccacctggaacctgaaaccctgtatcgc
atcagcgtacattcacttcttggctctgcagagggcgctgccgtctccattctccatcct
acagctccagctccagccagaattcccattcctccccggatatatcctgtacacaatgaa
gtctgtcctgaagtcaccatccagaatggcattgttaaaggctttaacatgatggaagcg
tttggtctgacgcggaaagctcactcatcagtggagggagtgtcagccgagccctttgtc
ttcaacactatgcctgcctacaccgtgtacagagatgtgcaactgacacagagcaccaag
tttattcaccctgccggtttctctccagagcacaccatcagcatcactttccgcctgctg
caggacacgccgatggaggcctttgctctctggcagctcactgacaatgacttccagcca
aagatgggagttgtgattgatccttctagccaacttctgatgtacttcagcctggactac
aggggagaagtacaggagctcacctttgatcagccacaggtccacaagattttctatgga
agttttcacaaggttcacctgtctgtcagccaggtgagcgtctccctgtctgtggactgt
cagcctgttggtgaaaggccagcccgccctctgggaaacctaccaactgatggattcgag
atgctgggaaaactggtgaaaaccagaggacctaaaagcggctcagccccgttccagcta
cagtcctttgaaatcatctgtaacaacacatgggcttcaatggacacctgttgtgatctg
cctggagtgagggatgaggagagctgccctgctccaccgtatgcatgtacctgttcctcc
aacgttcaaggagctccaggcccccctggaccaattgggaaaccaggtcctcgaggggaa
aaaggtgataagggagaacaggggtcaaagggagaggtgggccccccaggtaaggctgga
tttgaggggggtcttggacctgtgggcagcattgggccccgaggcataacagtccaaggc
aaaattggtccaccaggggccaggggggaaaaaggagatcctggcagaccaggagtgcag
ggttcacctggacctccaggttcaaagggagaagaggggatcccaggccccaggggtatc
agaggtgtggagggaaacataggtgccccgggcattacgggaaccaggggtttccaagga
cttccgggatacccaggacctgtcggggagaggggtccctttggacctgttggaccaacg
ggtctgccgggaaataaaggggaacgaggtgaaaagggggagccacagtctatggccatg
atctaccagctggtcacacaggcttgtgaacaactagttcacaaggaggttttgaagctt
gatatgtacatcaatgagattagtcgaaagcccgttcctattgaggagccggtgggtccc
ccaggggagcctggtataccagggtccaggggcccacctggtgccaggggcaaccagggg
agtgttgggtcaagagggagacctgggaggcctgggtatccaggagagcaaggacggaga
gggatccctggagaaaaaggaagtttggggaataatgtccaggggccctcagggattaaa
gggcttgcaggtcccccaggggagtccaagccaggggtcccaggtccaaaaggaaacgac
gccaaaccagggccaccagggaccactgggccttcgggtcagccaggagagattggacca
cagggcatgtgtgacagcagtggaggctgtcaaaatgttccccaacaaacagaagaccct
tattatgactaccaaccctga
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integrated database retrieval system
