Xiphophorus maculatus (southern platyfish): 102226312
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Entry
102226312 CDS
T02923
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma00310
Lysine degradation
xma00514
Other types of O-glycan biosynthesis
xma01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102226312
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
102226312
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xma01003
]
102226312
Enzymes [BR:
xma01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
102226312
Glycosyltransferases [BR:
xma01003
]
O-Glycan biosynthesis
O-linked Gal type
102226312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
102226312
NCBI-ProteinID:
XP_005801608
Ensembl:
ENSXMAG00000013284
UniProt:
M4AFU1
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Position
16:complement(9896565..9903148)
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AA seq
611 aa
AA seq
DB search
MHGLAVLPAVLLLLLLRCCSPVRGYFAEERWSPESPLLAPRVLLALICRNSEHSLPYFLG
TIERLKYPKDRMALWVATDHNEDNTTVILRDWLLKVENHYHYVEWRPKEEPSRYEDEDGP
KHWTDLRYEHVMKLRQGALESAREMWADYLMLVDCDNLLTDRDVLWKLIKENKTIIAPML
ESRGAYSNFWCGMTSQGYYRRTPAYLPIRKQVRKGCFAVPMVHSTFLIDLRKQATRQLAF
HPPHPEYSWAFDDIIVFAFSAQMADVQMFVCNRETYGYIPVPLRSHNTLQDEADSFLHSL
LEVNVRNPPLMPSKYIRVPRKKPDKMGFDEVFMINLPRRTDRRERMLKALHEQKIACKII
AAVDGKAMNVSEMHALGIHMLPGYQDPYHGRPLTKGELGCFLSHYNIWKEIVDRRLETSL
VIEDDLRFEVFFKRRLMNLMSEIEHEGLDWDLIYIGRKRMQVDHKEKVVPNIHNLVEADY
SYWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMYNKHPLSDYMEQFESRDLKAFSAE
PLLVFPTHYTGDPGYISDTETSTVWDNDKVRTDWDREARSGKTQEQAEISREAQNTDVLH
TPLDSTARDEL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggctcgccgtcctccccgccgtgctgctcctgctgctcctccgctgctgctcc
cctgtccggggatacttcgcggaggagcgctggagccccgagtctccgcttctggctccc
cgggttcttctcgccctcatctgcagaaactccgaacactctttgccgtactttctggga
actatagagcgactcaagtatcctaaggaccgtatggctctatgggtagcaactgatcac
aatgaggacaacaccacagtaattctgcgtgactggcttttaaaggtggagaaccattac
cattatgtggagtggaggccaaaagaagaacccagtcgttacgaggatgaagatggtcca
aaacattggacagatctccgctacgagcatgttatgaagcttcggcaaggagcactggag
tcggctcgtgaaatgtgggccgattacttgatgttggtggattgtgataaccttctaacc
gatagagacgtactatggaagttaattaaagaaaataaaacaataatagctccaatgctt
gaatcccgtggcgcctattcaaacttctggtgtggaatgacttctcagggttactacagg
cggacacctgcctacctccctatcaggaagcaagtccgcaaaggttgttttgctgttccg
atggttcactccacattccttatagacctcaggaaacaggctaccaggcagctagccttt
cacccgccacatccagaatacagttgggcatttgatgacatcattgtgtttgcattctct
gctcagatggcagatgttcaaatgtttgtatgcaacagggagacttatggttatattcct
gtacccctgcgctcccacaatactttgcaagacgaagcggatagcttcttacactccctc
ttggaggttaatgtgcggaatcctccccttatgccttccaaatacatccgtgttcctaga
aaaaaacctgacaaaatgggctttgatgaagtgttcatgataaacttaccgagacggact
gaccgcagggaacgcatgctgaaggcattgcatgagcagaagattgcttgcaagatcatt
gcagcagtagatggaaaagcgatgaatgtcagtgaaatgcatgccctgggtatccatatg
ctccctggataccaggacccttaccatggtcgaccactgacaaagggagaactaggctgc
tttctttctcactacaacatctggaaggagattgtagatcgccgtctggaaacttccctc
gtgattgaagacgacctgcgtttcgaggtcttcttcaaacgtcgcttgatgaacttgatg
agtgagattgagcatgaaggactggactgggatcttatatatattggtcggaaaagaatg
caagtggatcacaaggagaaagtagtgccaaatattcataacttagtagaagcagattat
tcatattggactctaggttatatgatttccctgcagggtgctgagaagcttttgaaagca
gaaccactaaaaaggattttacccgtcgatgaatttcttcctattatgtacaacaaacac
cctctctctgactatatggagcagtttgaaagcagggacctgaaggccttttctgcagag
ccgctcctggtgtttccaactcactatacgggcgaccccggctacatcagcgacacggag
acctccactgtgtgggacaatgataaggtccgtacagactgggacagagaagcgcgctcc
ggaaaaactcaggaacaggccgagatcagccgtgaggcccaaaacacagacgtgctccac
acccctctggacagcacggctcgagacgagctttaa
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