Xiphophorus maculatus (southern platyfish): 102226519
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Entry
102226519 CDS
T02923
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04142
Lysosome
xma04144
Endocytosis
xma05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102226519
04142 Lysosome
102226519
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102226519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102226519
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xma04147
]
102226519
Membrane trafficking [BR:
xma04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102226519
Exosome [BR:
xma04147
]
Exosomal proteins
Proteins found in most exosomes
102226519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
102226519
NCBI-ProteinID:
XP_005808346
Ensembl:
ENSXMAG00000001032
LinkDB
All DBs
Position
18:15041362..15063739
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPSG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGMVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPADAWKEGQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKMKQLPLVKTYLRSVQNHNNKAVNEALNNLFINEEDYAALRTSIDAYDNFDNISLAQSL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLN
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGTPQLMLTAGPNMAVPPQQAYGYGYTGAPAYGQPPQPS
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcacctgcagctccagaacttggggatc
aacccagccaacattggcttcagcactctcaccatggagtctgacaagttcatctgcgtg
agggagaaagtgggtgagcaggcccaggttgtcatcattgacatggccgatcctaacaac
cccatccgccggcccatctctgctgacagcgccatcatgaatcctgccagcaaagttatc
gcacttaaagacgctgcaaagaccctgcagatctttaacattgagatgaaaagcaagatg
aaggctcacaccatgacagacgatgtgactttctggaagtggatctctctcaacaccgtt
gccctggtcacagacaacgccgtgtaccactggagcatggaaggcgattctcaaccaatc
aaagtgtttgaccgtcactcgagcctggcaggctgccagatcatcaactaccgtactgat
gccaaacagaagtggttgctcctcattggtatctcagctcagcaaaaccgtgttgttggt
gccatgcagttgtactctgtggacaggaaagtctcccagcctattgaaggccatgctgct
ggctttgcacaatttaagatggagggcaacaccgaagaatctactctgttctgctttgct
gtgcggggacaagcaggaggaaaacttcatattattgaagttggaaccccgccaagtgga
aaccaaccattccccaaaaaagccgtggatgttttctttcctccggaagcccaaaatgac
ttccctgttgctatgcagatcagctccaagcaagatgtcgtttttctcatcacaaagtat
ggctacatccacctgtatgatctggagaccggaacttgcatctacatgaaccggatcagc
ggggagaccattttcgtcactgccccacatgaacccactgctgggatcattggagttaac
aggaaaggacaggtgctttcggtgtgtgtggaggaggaaaatataattccctacatcacc
aacgtgctccagaacccagacctggctctacgcatggctgtacgcaacaaccttgctggt
gctgaggaactatttgctcgcaagtttaacaccctgtttgctgcaggaaattactcagaa
gcagccaaggtggcagccaatgctcctaagggcatcctgcggactccagataccattcgg
aggttccaaagtgttccagcacaaccgggccagacttctcctttgctccagtactttggc
atcctgctggaccaaggccagctcaataagtttgagtctctggagctctgcaggcctgtt
cttcagcagggccgcaagcagctactggagaaatggctgaaggaggataagctggagtgt
tctgaagagctcggagacctggtgaagtctgttgatcccactctggccctcagtgtgtat
ctcagagcaaacgtccccaataaagtcattcagtgctttgcagagactggacagtttcag
aagattgttctttatgccaagaaggtgggctacacaccagactggatcttcttgttgagg
aacgttatgcggatcagtccagagcaaggtctccagttctcccagatgctggtgcaggat
gaggaacctcttgctgatattacacagattgttgacgtatttatggagtacaacttgatc
cagcagtgcacctcattcttactagatgctctaaaaaacaacagacccatggaaggaccg
ctgcagacacgtttactggaaatgaacttggttcatgctccacaggtggcagatgccatc
cttggcaatcagatgttcacccactatgaccgcgcccatgtggcacagctgtgtgagaag
gctggcctcctgcagagggcactggagcattacacagacctgtatgacataaagcgagcc
gtggtgcacacacaccttctcaacccagagtggttggtgaatttcttcggctccctctct
gtggaggactccttggagtgtctgagagccatgctgtcagccaacatccgccagaacctg
cagatctgtgtgcaggtggcttcaaaataccacgaacagctcagtactcagtccctcact
gagctgtttgagtcattcaagagctttgaaggattattctacttcctgggttctatagtg
aactttagtcaagatccagaggtccacttcaaatatattcaagctgcctgcaaaactggc
cagattaaagaggtggagagaatctgtcgagagagtaactgctacgacccggaacgggtg
aagaacttcctgaaggaggccaaacttactgaccagcttcctttaatcattgtatgtgac
cgctttgattttgtccatgacctggtcctctacctgtatcgcaacagccttcagaaatac
atcgagatctacgttcagaaggtgaacccaagtcgtctgcccgtggtcatcggaggtcta
ttggacgtggactgtgctgaggatgtgattaagaacctgatcatggtggttagggggcag
ttttccacagatgaacttgttgctgaagtagagaaaagaaatcgtctgaagttgctgctg
ccctggttggaggctcgtatccatgaaggctgcgaggaacctgctacccacaatgctttg
gccaagatttacatcgacagcaacaacaaccctgagcgctttctaagggagaaccctttt
tacgacagccgtgttgtgggcaaatactgcgagaaaagagacccccacctggcctgcgtg
gcttacgagagaggacagtgtgaccaagaactcattcatgtgtgcaatgaaaactcgctg
ttcaagagtctgtcccgctaccttgtacgacgcaagaaccctgagttgtgggcgagtgtc
ctcctggagaccaacaactacagaagaccccttattgaccaggtggtccagacagcatta
tcagagactcaggatccagaggaagtatccgtcacagtgaaggctttcatgacggccgac
ctgcccaatgaactcattgagctgctggaaaagattgtgctggacaattctgtcttcagt
gagcacagaaacctgcagaacctgctcattctgacggccattaaagctgacagaactcgt
gttatggagtacattaatcgccttgacaactacgatgccccagacatagcaaatattgcc
atcagcaacgagctgtttgaggaggcctttgcaattttcaggaagtttgacgttaacacc
tctgctgttcaggttctgattgagcacatcggaaacttagacagagcatatgaatttgcc
gagcgttgcaatgagcctccagtgtggagtcagctggccaaggcccagttgcagaaggga
atggtcaaggaagccatcgactcctacatcaaggctgacgacccgtctgcttacatggag
gtgggacaggctgcagcccaaagtggaaactgggaggatctggtaaagttcttgcagatg
gctcgtaagaaggctcgggaatcgtatgttgagacggagctgatcttcgctttggccaaa
accaatcgtctggcagagctggaagagttcatcaacggtcccaacaacgctcacattcag
caagtgggcgatcgttgttatgacgacaagatgtacgaagcagccaagctgctttacaac
aatgtctccaactttggccgtctggcctccacgttggtgcatttgggagaataccaggca
gccgtagatggagcgcgcaaagccaacagcacccgcacctggaaggaggtgtgttttgcc
tgtgtagatgggaaggagttccgtcttgcccagatgtgcggtctgcacatcgtcgtccat
gcagacgagctggaggaactaatcaactactaccaggaccgcggttactttgaggagctg
atcaccatgcttgaagccgctctgggtctggaacgcgcccacatggggatgttcactgag
ctggccatcctctattccaagtttaagccacagaaaatgagggaacacctggagctcttc
tggtcccgcgtcaacattcctaaagttctcagggcagctgagcaggcccacctctgggct
gagctggtgttcctctatgacaagtatgaggaatatgacaacgccatcatcaccatgatg
aaccatccagctgacgcctggaaggagggtcaattcaaagatattgtcaccaaggtggcg
aatgtggagctgtactacaaggccatccagttttatctggagttcaagccgttgttactg
aacgacctgctcatcgtgctctctccccggttggaccacacccgggccgtgaacttcttc
agcaagatgaagcagctgcctctcgttaaaacgtacctgcggtcggtccagaatcacaac
aacaaggcagtaaatgaggcactcaacaacctcttcattaatgaggaagactacgcggct
ttgcgaacatccatcgacgcgtatgataacttcgacaacatctcattggctcagagcctg
gagaagcacgaactgatcgaattcaggaggattgctgcttatcttttcaagggcaacaac
cgctggaagcagagcgtcgagctctgcaagaaggacaagctctacaaggacgccatgcag
tatgcatcagagtccaaagacacggagctggccgaggagcttctggcctggttcctgaac
gaagacaaaaaggagtgtttcgccgcctgcctgttcacctgctacgacctgctgcggcca
gacgtggtgctggaaaccgcctggcgacacaacatcatggacttctccatgccatacttc
atccaggtcatgagggagtatctatctaaggttgatgcgataaaggaaaaggtggacaaa
ctcgaagcctctgagtctctgaggaaacaggaggagcaggccacggaatctcaacccatt
gtttacggcacaccgcagctgatgctaacagcagggcccaacatggccgtgcctcctcag
caggcgtatggctacggctacacgggggcaccagcctacggccagccaccacagcccagc
tttggttacggcatgtga
DBGET
integrated database retrieval system
