Xiphophorus maculatus (southern platyfish): 102226588
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Entry
102226588 CDS
T02923
Name
(RefSeq) transcription factor SOX-4-like
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102226588
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102226588
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102226588
NCBI-ProteinID:
XP_014328451
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Position
3:21459106..21463726
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AA seq
423 aa
AA seq
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MVQKMSHTESTAEALSFFTGDSGSDSGASMDLDPAASPLSPAGSAASSTAGDKLGENPAW
CKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLRDSDKIPFIRE
AERLRLKHMADYPDYKYRPRKKVKSSASKAGSSSDRGEKVTGSSNNTSTKTSSSARKNGS
KSPSSSSSSSSSSNKPQKSLFGSSSSTKASLFASEHQSEHHHNSLYKSKSVSSAAKQIPD
AKKPKRVYVFGSGAASLSVSPTSSVVVPASPTLSSSADSSDPLSLYEDAASGREEGADSP
SSSSSSSFGGASERRSGHTYSNTRRASSPTPSGSHSSVSSSSSSSEDEEFEDDLLDVNPS
PSFDSMSLGSFGSSVLDRDWDVNGESVCGGSHFEFPDYCTPEVSEMISGDWLESTISNLV
FTY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagaaaatgagccacacagagagcaccgccgaggcgctgtccttttttaccggg
gactcaggctccgactccggggcaagcatggatctggacccggccgcctcgcctctctcc
ccggcgggctccgcagcctcctccaccgccggcgacaagctcggggagaatccggcgtgg
tgcaaaactcccagcggccacatcaagagacccatgaacgcattcatggtgtggtcgcag
atagagaggaggaagatcatggagcagtccccggacatgcacaacgcagagatctctaag
cggctggggaagcgctggaagctgctgagagacagcgacaagatccccttcatcagagag
gcagagcggcttcggcttaagcacatggcggactatcccgactacaagtaccgaccgagg
aagaaggtaaagtcgagcgcgtctaaggctggcagcagcagcgacagaggagaaaaagtt
accggtagctcaaacaacaccagcactaagacgtcctcatctgcgaggaagaacggatcg
aaatcacccagcagcagcagcagcagcagcagcagcagcaacaaaccccaaaaatcactt
ttcgggagcagcagtagcaccaaagcttcgctgtttgcctctgagcaccagtcagagcac
caccacaactctctctacaagtccaaatctgtctcctcggctgccaagcagatacccgat
gccaagaagcccaagagagtatacgttttcggaagcggcgcggccagtctgagcgtcagc
cccacgtcctccgtggtggtgccggctagtcctacgctcagcagctcggcggactctagc
gacccgctcagtctctacgaggacgcggccagcggcagagaggaaggcgccgactcccca
agcagcagcagcagcagcagcttcggcggagcttcggagcgccgcagcggccacacgtac
agcaacactcggcgggcttcttcgcctactccctctgggtcgcactcctccgtctcttcc
tcctcgtcttcctcggaggacgaggagttcgaggacgacttgctggacgtcaacccgagt
ccgagcttcgacagcatgtcgctggggagcttcggctcctcggtcctggacagggactgg
gacgtgaacggcgagtccgtctgcgggggttcccacttcgagttccccgactactgtacg
cccgaagtcagcgagatgatatcgggagactggctggagtccaccatctccaacctggtg
ttcacatactga
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