Xiphophorus maculatus (southern platyfish): 102226738
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Entry
102226738 CDS
T02923
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102226738 (pus1)
Enzymes [BR:
xma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
102226738 (pus1)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102226738 (pus1)
Prokaryotic type
102226738 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
102226738
NCBI-ProteinID:
XP_005799701
Ensembl:
ENSXMAG00000000988
UniProt:
M3ZFI9
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All DBs
Position
8:9211629..9214349
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AA seq
417 aa
AA seq
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MFRTRPLLSALVNYRQLLERNGLKFLCTMSEDARDQETAKLLKRPNEVNEDSAERATKRI
KAEGEHNEDDKRYPKKKVVILLAYSGKGYYGMQRNPGNSQFRTIEDDLVTALVKSGCIPG
NHGDDMRKMSFQRCARTDKGVSAAGQVVSLKLRLIEDIIEKINENLPPQIRVLGLKRVTQ
GFNSKNNCDARTYAYMLPTVAFSPKDYDTENIAAFRLETETLQKVNQLFALYKGTHNFHN
FTSQKAPSDPSARRYITEMSCGEPFVRNNYEFAVITVRGQSFMLHQIRKMIGLVIAVIKG
YAKEEVMERSWGQEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHERLEWDREEEAIKA
FKEAHIYPTIVETECEEGSMVSWMATLPIHDFEATVTGTQDNKDQKQENADEGNDSD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaacccgaccactgttaagtgccttagttaactacagacagttgttagagaga
aacggtttaaagttcttgtgcacaatgagtgaagacgccagagatcaagagacagccaag
ctgttaaaaaggccaaatgaggtgaatgaggactcagctgagagagccactaagagaata
aaagcagaaggggagcacaatgaagatgacaagaggtacccaaagaagaaagtggtcatt
cttttggcatactctggaaagggatactatggcatgcagagaaatcctggaaactcccag
tttagaaccattgaagatgatctggtcactgctctagttaaatctggttgcattcctgga
aaccatggtgatgacatgaggaagatgtccttccaaagatgtgccagaactgacaaaggt
gtttctgctgctggtcaagtggtttcactgaagcttcgtttaattgaggacataatagaa
aaaatcaatgagaatttaccaccacagatcagggtgcttgggctcaagcgagtgacccag
ggatttaattccaaaaataactgtgatgcccgtacatatgcctacatgctcccaactgta
gccttttctcctaaagactatgacactgagaacatagcggcgtttcgtctagaaacagag
actcttcagaaggtgaaccaactttttgccctctacaaaggcacccataacttccacaac
tttacttcccagaaggctccaagtgaccccagtgcccgccgctacatcacagagatgtcc
tgcggagagccttttgtccgcaacaactacgagtttgccgtgatcaccgtgcgaggccag
agctttatgctgcaccagattcgcaagatgatcggcctggtgattgcagtgatcaaaggc
tacgccaaggaggaggtgatggagcgaagctggggtcaggagaaggtggacgtccctaaa
gctccgggactcgggctggtactcgagagggttcactttgatcggtacaacaagcgcttt
ggaggggacggtctgcatgagcggctagagtgggatcgcgaggaggaggcgatcaaggcc
ttcaaagaggctcacatatatcctaccattgttgagactgaatgtgaggagggttccatg
gtcagctggatggccactcttcccatccatgactttgaagcaacagttactggaacacaa
gacaataaggaccaaaaacaggagaatgcagatgaagggaacgactccgattag
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