Xiphophorus maculatus (southern platyfish): 102226767
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Entry
102226767 CDS
T02923
Symbol
afdn
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04517
IgSF CAM signaling
xma04520
Adherens junction
xma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102226767 (afdn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102226767 (afdn)
04530 Tight junction
102226767 (afdn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
Yop-YscD_cpl
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
102226767
NCBI-ProteinID:
XP_023203469
Ensembl:
ENSXMAG00000005607
LinkDB
All DBs
Position
15:2280433..2385374
Genome browser
AA seq
1884 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERQLDLDEKPLVVQLNWNKD
DREGRFVLKNENDVLPKKSQSNGPEKEKDGVIQNFKRTLSKKEKKEKKKREKEFARIPDG
DEQILSREDGENNRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFMSSDGR
PESGGTLKIYADSLKPNIPYKTILMSTRDTADFAVVEALEKYGLEKENPREYCIARQEEK
TGKEVILDDLDCPLQILRDWPADRGAMVFQLKKRPPDYQPRKGRKDDKGLRGKDGSMPPE
KLPYLVELSPGRGNHYAYYAYRHQEDGSDSRDKPKLYRLQHSITEVGSDCTEDGAIQLLG
PGILPHHCNLMHSEGMVTVTPHGHDADTFVDGQRITETTVLRSGSTLQFGSAHVFKFVDP
MVDQGGKRDPNAAMRSRHKSGSVPETTFDLRGDVLSGAPLPTSKSSGKLEMERGMVKPMI
RGEQQDSRSQDLSADRTELTLPASIDFRENSEDTFLSAIINYTNSSTVHFKLSPTYVLYM
ACRYVLSPTYRPDMSPSERTHKVIAIVNKMVSMMEGVIQEIAEGDQKQKNIAGALAFWMA
NASELLNFVKQDRDLSRVTLDAQDILAHLVQMAFKYLVHCLQADLNNYMPAFLDDPEEHN
PQRPKIEDVLQTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTDADSGLCCH
YWGAILRQQLSHIESWAEKQGLELAADCHLSRIVQATTLLTMDKYSTQDVQNIHNTCFKL
NSLQLHALMTNYRCAQDEPYIPPDLIDHVVAVAENTADELARSDGREVQLEEDPDLQLPF
LLPEDGYSCDVVRHLPNGLQDFLEPLLQRGFCRLTPHPRSPGTWTVHFEGADNDNHFSAA
DNTEMPMRKEPEVVTVTLKKTNGMGLSIVAAKGAGQEKLGIYIKSVVKGGAADKDGRLAA
GDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRAS
DRGRDKNGKMRPKSEGFELYNNAVQNGDPESPQPGWDSYAEPKKMSGEDRLLKNRADHRS
SPNVANQGQSPATKSVYPGGPGTKITSVSTGNLCADDEPSPPRPEAYPIPTQTYPREYFT
IPASKSQDRVMGPGQGPPQHWQGMEDREHLPVVDNIHNSMQRINHSQEDLYPPVGMMRPD
ERMQPLYPQDYQHRDLDYQHRDLDYQHRGPPGGVGAPLDHWTPQPQVSSSLESSTSSQEQ
LNFSASSTSSNKGQNQKTGPGRWKTPNTPYIVPPHSVQPPSRSDLPPPPPPPPAVYPDPY
DPQPELPPPPPATISPVTAQQAADRRKREEQQRWYEKEKARLEEERERKRREQERKLGQI
RANPVMPVQPHNNGGAMPPPHHQPPMASMAPPQPYHAPQPQPPPPPSRPEKLSSLPRSAV
LPPAAAANSAAMDTVIRELLPQQQPRTIERRDLQYITISKEELSTSDSLSPDPWKRDARE
KAEKQQQLHIVDLLDKEIQELQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEDEEE
EDDEDMDAMLIMQRLEAEKRARQQTAVPAISVLDLLQDEERRRKQQLEEIRKREAEERVK
QEEERRWREEERVKREAEEKRRQEEEYYTRLEAERRRQHEEAERKLLTPDEPAGLYRPPL
PRDYNPPAPHNPTNTPPPPPQRNTSYLKTQVISPDTLYTAKFVSYAGDDEDEEEAYSAGS
GGQSGFNSHTGNSTGVVGSGEFYNDPRDKWTKSQEQENSIPSDAPESLTFKERQRLFSQG
KEVSNKVKASRKLMELENELNTKQ
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagaggaggaaactggccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccagcccacggaggacctggagttccatggc
gtgatgcggttctacttccaggaccgggtggccgggaactttgccacaaagtgcatccgg
gtctccagcacggcgacgacgcaggacgtcatcgagacgttggcggagaagttcaggccg
gacatgaggatgctgtcgtcgcccaagtactcgctgtacgaggtccacgtcagcggcgaa
gagcgccagctggacctggacgagaagccgctggtggttcagctcaactggaacaaagac
gacagggagggacgcttcgtcctgaagaacgagaacgacgtcctgcccaagaagagtcag
agtaacggaccggagaaggagaaagacggagtgatacagaacttcaaaaggactttgtcc
aagaaggagaagaaggagaagaagaagagggagaaagagtttgctcggatcccagacgga
gatgaacagattctgagccgcgaggacggggagaataaccgtctggcggcggaggtttat
aaggacatgccagaaaccagcttcaccaggacgatctccaacccggaggtggtgatgaag
aggaggcggcagcagaaactggagaaacgaatgcaggagttcatgagcagcgatggaagg
ccagagtcggggggaactttgaagatttacgctgacagcctgaagcccaacatcccctac
aagaccatcctgatgtccaccagagacacggccgacttcgctgtggtggaggcgctggag
aagtacgggctggagaaggagaaccccagggagtactgcatagcccggcaggaagaaaag
acgggtaaagaggtgatcctggatgatctggactgtcctctgcagatcctcagggactgg
cctgcagacagaggagcgatggtgttccagctgaagaagagacctccggattaccagccc
aggaaggggaggaaggacgacaaggggctaagagggaaagatggctccatgccgccggag
aaactgccttatctggtggagctgagtccaggccgagggaatcactatgcctactacgcc
tatcggcaccaagaagacggctccgactccagagacaaaccgaagctgtatcggcttcag
cacagcatcaccgaggtcggctcggattgcaccgaggacggggccatccagctgctcggc
ccggggatcctgccccaccactgcaacctgatgcacagcgaaggcatggtgacggtgacg
ccacacggccacgacgccgacaccttcgtggacggccagcgcatcacggagaccacggtg
ctgcgatccggatccacgctgcagtttggctctgcgcacgtcttcaagttcgtggatccc
atggtcgaccagggagggaagagggacccgaacgccgccatgaggagccgacacaaatcc
gggagcgtaccagagacaacctttgacctccgcggagacgtcctcagtggagcgcccctg
cccaccagcaagagctcagggaaactggagatggagagaggcatggtgaaacccatgatc
cgaggagagcagcaggacagcagatcccaggatctttctgcagacaggacggagctgact
cttccagctagcatcgacttcagagaaaactcggaggacaccttcctgtcggccatcatc
aactacaccaacagctccacggtccacttcaagctgtcgcccacctacgtcctgtacatg
gcctgccgctacgtcctgtcgcccacgtaccggcccgacatgtccccgtcggagaggacg
cataaagtcatcgccatcgtcaacaagatggtgagcatgatggaaggcgtcatccaggag
attgctgaaggggatcagaaacaaaagaacatcgcgggagcgctggctttctggatggcc
aacgcctccgagctgctgaacttcgtcaagcaggaccgggacctgagccgcgtcacgctg
gatgcgcaggacatcctggcccacctcgtccagatggccttcaagtacctggtccactgc
ctgcaggcggatttgaataactacatgcccgccttcctggacgacccagaggaacataat
ccacagagacccaagatcgaggacgtcctgcagacgctgacgggcgccatgtcgctgctt
cgccgctgccgggtcaacgccgctctcaccatccagctcttctcgcagctcttccacttc
atcaacatgtggctgttcaacaaactggtgacggacgccgactcaggactgtgctgccac
tactggggcgccatcctgcggcagcagctgagccacatcgagtcctgggccgagaagcag
ggcctggagctggctgccgactgccacctcagccgcattgtccaggccaccaccctgctg
accatggacaaatactccacgcaggacgtccagaatatccacaacacctgcttcaagctg
aactcgctccagctccacgccctcatgaccaactaccgctgcgcccaggacgagccctac
atcccgcccgacctgatagaccacgtggtggcggtagcggagaacacggcggacgagctg
gcgaggagcgacggccgagaggtgcagctggaagaggacccggacctgcagctgcccttc
ctgctgccggaggacggctactcctgcgacgtggtgcggcaccttcccaacgggctgcag
gacttcctggagccgctgctgcagaggggtttctgcagactaactcctcatcctcgctct
cctggtacctggaccgtccactttgaaggagccgacaacgacaaccacttttctgctgcc
gacaacactgaaatgccaatgaggaaagagccggaggttgtcacggtaaccctgaagaag
accaacggcatgggcctcagcatcgtggccgccaagggtgccggacaggagaaactcggc
atttacatcaagtctgttgtgaaaggcggagcggcggacaaggacggccgtttggcagca
ggtgaccagttgctgagtgttgatggacgcagtctggtcggtctgtcgcaggagagagct
gcagagctgatgacgcggacgggctctgtggtgactctggaggtggccaagcagggagcc
atctaccacggcctggcgacgctcctcaaccagcccagccccatgatgcagagagcgtcg
gaccgcggccgcgataagaacgggaagatgcgtccgaagagcgagggcttcgagctctac
aacaacgccgtgcagaacggcgatccggagagtccgcagcccggttgggactcgtacgca
gaaccaaagaagatgagtggagaggaccggcttctgaagaaccgggccgaccaccgatcg
agccccaatgtagccaatcagggccagagtcctgcgaccaagtcggtttatcctggagga
ccgggaaccaagatcacctccgtttccaccgggaacctctgtgcagacgacgagccgtcc
ccgccccggccggaggcctaccccatccccacccagacctaccctagggagtattttacc
atcccggcctccaagagccaggaccgggtgatgggtccggggcaggggcccccgcagcac
tggcagggcatggaggacagagagcacctccctgtggtcgacaacatccacaacagcatg
cagaggattaatcactcccaggaagatctgtaccctccggtgggaatgatgaggcctgat
gagcggatgcagccgctctacccacaggactaccagcaccgggatttggactaccagcac
cgggatttggactaccagcaccgaggtccgccaggaggtgtaggagctccgctggaccac
tggacgcctcagccgcaggtttcctcttcgctggagtcctcgacatccagccaggagcag
ctcaacttctctgcttcctccacgtcttcaaacaagggccagaaccagaagaccgggccg
ggccggtggaagacgccgaacacgccttacatcgttccgccgcactcggtgcagccgccg
tcccgctccgacctgccgcctcctccgccgccaccgcctgccgtctaccccgacccctac
gatccgcaaccggagctgccgccgccgccgcccgccaccatcagcccggtgacggcccag
caagccgccgaccgcaggaaacgggaggagcagcagcgctggtatgagaaggagaaagcc
cggctggaggaggaaagagagaggaagaggagggagcaggagaggaagctgggccagatc
cgggccaacccagtcatgcccgtccagccccataacaacggtggagccatgcctcctcct
catcaccagccgcccatggcctccatggcgccaccccagccttaccacgccccgcagccg
cagccgccaccgccaccttccagaccggagaagctgtccagcctgccgcgctccgccgtg
ctgccgcccgccgccgccgccaactctgccgccatggacacggtgatcagggagctgctt
ccacagcagcagccgcggaccatcgagcggcgcgacctgcagtacatcaccatcagcaag
gaggagctgtccaccagcgacagcctgtctccggatccctggaagagagacgcccgcgag
aaggccgagaagcagcagcagctccacatcgtggatctgctggacaaagaaatccaggag
cttcaggcgaaaccagagcgaacagcggaggaaagcgaccgactccggaagctgatgctg
gagtggcagttccagaagcgactgcaggagtccaaacagagcgacgaagacgaggaggag
gaggacgatgaggacatggacgccatgctgatcatgcagaggctggaggccgagaagaga
gccaggcagcagactgctgtcccagctatctctgttctagacttgttgcaggacgaggag
cggcggcgcaagcagcagctggaggagattcggaagagggaggcggaggagcgggtgaag
caggaggaagagaggaggtggagggaggaggagagagtcaagagagaggcggaggaaaag
aggagacaggaggaggagtactacacacgtctggaggccgagcggcggcggcagcacgag
gaagcagagagaaagctgctgacgcccgatgagccggccggtctgtatcggcccccgctg
cctcgggattacaacccccccgccccccacaaccctactaacacccccccgcccccacca
cagagaaacacctcctacctcaaaacacaggtcatctcgcccgacacgctctacacagcc
aaattcgtctcgtacgcgggcgacgacgaagatgaggaggaagcctactcggcagggagc
ggcggccaatcagggtttaactcgcacactggaaactcgacaggagttgtaggatcagga
gagttctacaacgacccacgagacaaatggacaaagagtcaggagcaggagaattcgatc
cccagcgacgctccggagagtttgacctttaaggagcgccagcgcctcttctctcagggg
aaagaggtttccaacaaggtcaaagcttcccggaaactgatggaactggagaacgagctc
aacaccaagcagtag
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integrated database retrieval system
