Xiphophorus maculatus (southern platyfish): 102226865
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Entry
102226865 CDS
T02923
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
xma03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102226865 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102226865 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102226865 (tnpo3)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
102226865 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
102226865
NCBI-ProteinID:
XP_005813786
Ensembl:
ENSXMAG00000013062
UniProt:
M4AF64
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Position
17:complement(71583..81747)
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AA seq
923 aa
AA seq
DB search
MEGGKPSLTLVYQAVQALYHDPDPSGKERASLWLGELQRSMFAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHNALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNEDAGSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSNTV
IALLTSCVEKAGGDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQILQRDETSTN
LHEAASDCVCSALYAIESVDTNVALALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAN
LHGVFRPYIQRLLHCLARHCQLDPDHEGIPEETDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKDGNPPWEVTEAVLFIMASIAKSVDPENNPTVAEVLQQVVLLPESVHMAVRYT
SIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVLALKKLLAERS
RNGKSADPTAWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNSLRNHPDTVDDLFRLATRFVQRSPVTLLGSSIVVHIIQCA
IAATSLDHRDANCSVMKFIRDLIHTGVGNDHEEDFALRKRLIGQAMEQNGQQLINQLLHS
CCFCLPPYTLPDVAEVLWEVMLFDRPMFCRWLENALKGLPKQTAGGAVTVTHKQLTEFHK
QVTSAEECKQVCWAIREFTRLYR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggtaaaccgagcctgacgctggtctaccaggcggtccaggccctgtaccac
gacccggatccgtccgggaaggaacgagcctcgctgtggctcggagagttgcagagatcg
atgtttgcctgggagatctcggaccagctgctgcagctgaagcaggacgtggagtcgtgt
tacttcgctgctcagaccatgaagatgaagatccagacttccttctacgagcttcctcca
gagacccacaatgcactgcgggactccctgctgacccacatccagaacctcaaagacctg
tcgcccatcatcgtcactcagctggccctggccatcgctgacctcgctctgcagatggcg
tcctggaagggctgcgttcacacgctcatagagaagtacaacgaggacgcgggctccatg
ccgttcctcattgagatcctgacggtcctgccggaggaagttcacagccggtcgctgcgg
atcggcgccaaccgccgcaccgagatcatcgaggacctggccttctactccaacaccgtg
atcgccctgctgacgtcctgcgtggagaaggcaggcggcgatgagaagatgctcatcaag
gtgttccgttgcctgggcagttggttcaacctgggcgtcctggacagcaacttcatggcc
agcaaccagctgctgatggtcctgttccagatcctgcagagggacgagacgtccaccaac
ctgcatgaggcggcgtcggactgcgtgtgctcggcgctgtacgccatcgagagcgtggac
accaacgtggctctggcgctgcagctgttccagggcgtgctgacgctggagacggcctac
cacatggccgtggcccgcgaggacctggacaaggtgctgaactactgccggatcttcacg
gagctctgcgagacgttcctggagacgacggtcagaacgccgggtcagggcatgggcgac
ctgaggacgctggagctgctgctgatctgcgccggacacccgcagtacgaggttgtggag
atctcctttaacttctggtaccgcctgggtgaacatctctacaagatcaacgacgccaac
ctgcacggcgttttccggccgtacatccagcggctgctgcactgcctggcccgccactgc
cagctcgacccggaccacgagggaattccggaagaaacggacgactttggggagttcagg
atgagagtatcggacctggtgaaggacgttatcttcctggtcggctccatggagtgcttc
tctcagctgtactccaccctgaaggacgggaacccgccctgggaggtgacggaggccgtc
ctcttcatcatggcttccatcgccaagagcgtcgacccggagaacaacccgacggtggcc
gaggtactgcagcaggtggtgctgctgccggagagcgtgcacatggctgtgcgctacacc
agcatcgagctggtgggggagatgagcgaggtggtggaccggaacccgcgcttcctggac
ccggttctgaactacctgatgaagggcctgagggagaagccgctggcgtcggcggcggcc
aaggccatccacaacatctgctcggtctgccgcgaccacatggcccagcacttccagggg
ctgctggacatcgcccgctccctcgactccttcgccctgtccaccgaggccgccgtgggc
ctcctcaaaggtacggcactggttctggcccggctgcctctggagaagatcgcggagtgc
ctcagcgacctgtgcgccgttcaggttctggctttgaagaagctgctggcggagcggtcc
aggaacgggaagtcggccgacccgacggcgtggctggaccgactggccgtcatcttcaga
cacacgaaccccatcgtggagaacggccagacgcacccgtgccagaaggtgatccaggag
atctggcccgtcctgtcggagacgctcaacgcccaccaggctgataatcgcatcgtggag
cgttgctgccgctgcctgcgcttcgccgtgcgctgcgtcgggaaaggctccgcctccctg
ctgcagccgctcgtcactcagatggtgagcgtctaccaggtgtacccgcactcctgcttc
ctgtacctgggcagcatcctggtggacgagtacggcatggaggagggctgcaggcagggg
ctgctggacatgctgcaggcgctgtgtatgcccaccttccagctgctggagcagcccaac
agcctgaggaaccacccggacaccgtggacgacctgttcagactggccaccaggttcgtc
cagaggagtcccgtcacgttgctaggcagcagcatcgtggtccacatcatccagtgcgcc
atcgccgccacgtcgctcgaccaccgggacgccaactgcagcgtcatgaagttcatccga
gacctgatccacaccggagtcggcaacgaccatgaggaggactttgcgctgcggaagcgt
ctgattggtcaggccatggagcagaacggccagcagctcatcaaccagctgctgcactcc
tgctgcttctgtctgccgccgtacacgctgcccgacgtggccgaggtcctctgggaggtc
atgctgttcgaccgacctatgttctgccgctggctggagaacgcgctgaaggggttgccg
aagcagacggcgggcggcgccgtgaccgtcacccacaagcagctgaccgagttccacaag
caggtgaccagtgctgaggagtgcaagcaggtgtgctgggccatcagagagttcaccagg
ctgtaccggtag
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