KEGG   Xiphophorus maculatus (southern platyfish): 102227016
Entry
102227016         CDS       T02923                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03030  DNA replication
xma03420  Nucleotide excision repair
xma03430  Mismatch repair
xma03440  Homologous recombination
xma03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102227016 (rpa3)
   03420 Nucleotide excision repair
    102227016 (rpa3)
   03430 Mismatch repair
    102227016 (rpa3)
   03440 Homologous recombination
    102227016 (rpa3)
   03460 Fanconi anemia pathway
    102227016 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xma03032]
    102227016 (rpa3)
   03400 DNA repair and recombination proteins [BR:xma03400]
    102227016 (rpa3)
DNA replication proteins [BR:xma03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    102227016 (rpa3)
DNA repair and recombination proteins [BR:xma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     102227016 (rpa3)
   MMR (mismatch excision repair)
     102227016 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     102227016 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 102227016
NCBI-ProteinID: XP_005804536
Ensembl: ENSXMAG00000016840
UniProt: A0A3B5QM39
LinkDB
Position
13:25834066..25835189
AA seq 122 aa
MAGILDVPKPRINCSMLSQFISRAICFVGRVEKVHPTGKMFTVMDGEGKTATVELNEPLE
EELSGIVEVIGMVSNKGEIMASTYNLLREDKGIPFDLELYNEALKVIHDFPQHYPFQVAA
SG
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcaggtatactggacgtcccaaaaccgagaataaactgctccatgctttcgcagttc
atcagccgagccatctgcttcgtcgggcgtgttgaaaaggttcatcccactgggaaaatg
ttcactgtgatggatggagagggaaagactgcaacagtggaactaaacgaacctcttgaa
gaggagctgagtggaattgtggaggttataggaatggtgtcgaacaaaggagaaataatg
gccagcacatacaacctgctgagagaggacaaggggattccctttgatttagagctgtac
aacgaagcactgaaggtcatccatgacttcccccagcactaccctttccaggtggctgca
agcggatga

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