Xiphophorus maculatus (southern platyfish): 102227048
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Entry
102227048 CDS
T02923
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102227048 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102227048 (nup50)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102227048 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
102227048
NCBI-ProteinID:
XP_005812302
Ensembl:
ENSXMAG00000010312
UniProt:
M4A786
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All DBs
Position
17:2923070..2928620
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AA seq
446 aa
AA seq
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MAKRIADKELTDRNWDLEEEGEEAGTFSVASEDVLKSRAIKKAKRRNTGGESEGGGAFKG
FKGFSMATSSTTPSSSLTAFSGFGGTGSFKGFGGLSNGTGSTASFGGFPSAAKAGVAFNG
PSSAQPGTDIVAQQTNGSAPGPSPAPCSRSREYSRQLTALNQSVRDWISKHVNDNPLCDL
NPIFRDYERHLASIERQYGASAEETQQGDASTPPPPAPSSSSSSSSVALFSFSKTSTEDL
GQKRSGSAPLPAGVSFNFGQKVDAPALGSLASKPSVPSFSFSSSSNQSSPFGAAGPSAAL
SFGGTKTSDAPAADDKDEESEEPPKPEVKEVKEDDAFYSKKCKLFYKKELEFKEKGVGTL
HLKRTAEGKTQMIIRADTNLGNILLNILVPPTLPCSRVGKNNVMVVCVPNPPVDDKNPSV
AVPLLIRVKTAEDADELHKTLEEKKR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaggatcgctgataaggagctgacagacaggaactgggacctggaggaggag
ggagaggaggccgggacgttttctgttgcgagtgaggatgtgttgaagagccgcgccata
aagaaagccaaacgcagaaacactggaggagagagcgaagggggaggagctttcaaaggg
tttaaaggcttctccatggcaacgtcctcaaccacgccctccagcagcctcacagcgttc
tccgggttcgggggtaccggcagctttaaaggcttcggaggcctgagcaacggaaccggc
tccacagcttcgtttggaggattcccgtctgctgcaaaggccggtgtggcgttcaatggg
ccctcctcagcccagcccgggactgacatcgtggcccagcagaccaatggctccgccccc
ggccctagccccgccccctgcagccgcagcagggagtacagccggcagctgacggcgctc
aaccagtcggtgcgcgactggatcagcaagcatgtgaacgacaacccgctgtgcgacctc
aaccccatcttcagagactacgagcgccacctggccagcatcgagcggcagtacggcgcc
agcgccgaggagacgcagcagggagacgcctccactccccctcctcctgctccctcttca
tcatcctcctcttcctcagtggctctgttctccttcagtaaaacctcgacagaagatttg
ggtcagaaacgctccggctcggcgccgctccctgccggcgtctcctttaacttcgggcag
aaggtggacgcacctgccctggggtccttggcatccaaaccgtccgtccccagcttttcc
ttctcctcctcatccaatcagagctccccgttcggagcagctggaccctcggctgcattg
tcctttggcgggaccaaaacttcagatgccccagctgcagacgacaaagacgaagaatcg
gaggagcctcccaaaccagaggtcaaggaggtcaaagaggacgacgccttctactctaag
aagtgtaagttattctacaagaaggagttggagttcaaagagaaaggcgtgggaacgctg
cacctcaaacgcaccgcagaggggaagacccagatgatcatcagagccgacaccaacctg
ggaaacattctgctgaacatccttgtgccgcccaccctgccgtgctcgcgggtcgggaag
aacaacgtcatggtggtctgtgtgccgaacccgcccgtcgacgacaagaacccgagcgtg
gccgtccccctgctgatccgagtgaagaccgcagaggacgccgacgagctccacaagacg
ctggaggagaagaaacgctga
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