Xiphophorus maculatus (southern platyfish): 102227052
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Entry
102227052 CDS
T02923
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xma02000
]
102227052
03037 Cilium and associated proteins [BR:
xma03037
]
102227052
Transporters [BR:
xma02000
]
Other transporters
Pores ion channels [TC:
1
]
102227052
Cilium and associated proteins [BR:
xma03037
]
Other cilia and associated proteins
Stereociliary proteins
102227052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Arc_capsid_dom
Motif
Other DBs
NCBI-GeneID:
102227052
NCBI-ProteinID:
XP_023193655
LinkDB
All DBs
Position
8:complement(4079651..4094080)
Genome browser
AA seq
1034 aa
AA seq
DB search
MAAAVFSGDRPSESVSATLCQLFVPRKGNLRHYTWTDLHLTTKHPLLPACGRRHGNRAVR
HLSWALAGSRGRADGGRRKERRSCREEAQRRRTSESRLMKMRPTAMAATGGKPTGGQQVG
EEEEEEEEEEXRGRGKKAGSDEEEDDEDEAPKGRGRGGNRRKPGNKRGGGKNNGDDDDSE
DESPKKKRGGAANRKKGGKAQDSDEDDSDDGKGKRGKKGGKKGGKEEESGKGKKGDAKGK
DKGKDKGKDKDDDKKKKKKKGDSSSDSNSNSDEEEESMSEGEMARLMEEVEEKKKLIATI
RNKPWRMKRRLVLLKEAQQFVDKFEGALGKGKGRKWYAYKVMMTKKWIKFQRDFENFRTA
CIPWERKIKEVESHFGSSVASYFIFLRWMYGMNLVLFGLTFGLVVIPEVLMGLPYGSIPR
KTVPRAEQDTAQDYSVLMDFNGYCKYSVLFYGYYDDKRTIGPLKFRLPLSYLLVGIGSFG
YSLMLVIRTMAKNADVGGGDGEEGEFTFAWKMFTSWDYLIGNAETADNKYASITTSFKES
IVDEQENQKDENIHLRRFLRVLANFLITCSLGGSGYLIYFVVKRSQEFATRDDLSWYEKN
ELEIIMSLLGLVCPPLFETIAELEDYHPRIALKWQLGRIFALFLGNLYTFLFALFDEVNS
KLDEEQSIKNASIWAMKEYYANYSRLLNDSDATPPPMSPADVIRGPCWETAVGIEFVKLT
VSDIQVTYLTILIGDFARAVIVRFLNYCWCWDLEAGFPSYGEFDISGNVLGLVFNQGMIW
MGAFYAPGLVGINVLRLLSSMYYQCWAVMATNVPHERVFKASKSNNFYMGLLLLILFLSL
LPVVYTIMTLPPSFDCGPFSGRAKMFDVIMETIRLDLPAFMGTLFSYAANPGLIIPAVLL
MVLAIYYLNSVSEAYQNSNMELKKKMQMARDEEKNRRNNKDSTNQVMKDLEDLLPNRSLS
PPPEPEKPPEPEAKPTKTKPGSAGKGVNLQKDVALASSNPNVRGPVDRAPGPRGPGPGPG
AGRGRGRGRGAPPS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctgtcttctcgggtgacagaccgagtgagagtgtttcagcgactctatgc
caactttttgttcccaggaaaggaaacctgcgccattacacctggacagatctgcacctc
acaacaaaacaccctttgttacctgcgtgtggccgtcgccatggcaacagagctgttaga
cacctgagttgggctctggcaggaagccgaggcagagcagacggagggcgacggaaagag
agaagatcatgccgagaagaagcgcagcggcggaggacgtcggaatcgagattgatgaag
atgagaccgacagcgatggcggcaactggaggaaagccaacaggaggccagcaggtgggc
gaggaggaggaggaagaggaagaggaagagngaagaggaagaggtaagaaggccggcagc
gacgaagaggaagacgatgaagatgaggctccaaagggacgaggaagaggaggaaacagg
aggaagcccggcaataaacgaggcggcggtaagaacaacggcgatgatgatgacagcgaa
gatgagtctcccaagaagaagagaggaggagcagcaaaccggaagaaaggcggcaaagcc
caagacagtgatgaagacgacagcgacgacgggaaaggaaagagaggaaagaaaggaggg
aagaaaggagggaaggaggaggagagcgggaagggaaagaaaggcgacgccaaaggaaaa
gacaaagggaaagacaaagggaaagacaaagatgacgacaagaagaagaagaagaagaag
ggtgacagttcgtcggactccaactcgaactcagacgaggaggaggagtccatgtcggag
ggggagatggcgcggctaatggaggaggtggaggagaagaagaaactgatcgccaccatc
aggaacaagccttggcggatgaagcggcggctcgttctcttaaaggaagctcaacaattt
gtggataagtttgaaggtgctctgggaaaaggaaaaggcaggaagtggtatgcctacaaa
gtgatgatgacgaagaaatggattaagtttcagagagattttgaaaatttcagaacagcc
tgcatcccctgggagaggaagattaaagaggtggaaagtcacttcgggtcatcagtcgct
tcttacttcatcttcctgcgatggatgtacggcatgaatctcgtcctatttggtctcacc
tttggactcgtcgtcattcctgaggtcctcatgggtcttccttacgggtccattcccaga
aagacggtaccgagagcagagcaggacactgctcaggattattcagttctcatggacttc
aacggatactgtaaatactcagtcctgttctacggatattacgacgacaagagaaccatt
ggtccgctaaagttcaggttgcctctgtcctacctcttggtgggtatcgggagcttcgga
tacagcctgatgctggtgatccggacaatggctaaaaatgctgacgtcggcggaggagat
ggagaagaaggcgagttcaccttcgcctggaagatgttcaccagttgggactacctcatc
ggcaatgccgaaaccgctgacaacaagtacgcctccatcaccaccagcttcaaggaatcc
atcgtggacgagcaagagaaccagaaggacgagaacatccacctgcggcggtttctccgg
gttctggccaacttcctgatcacctgcagtcttggcggcagtgggtacctcatctacttt
gtggtgaagagatcgcaggaatttgccaccagggatgacctcagttggtatgagaagaat
gagttggagatcatcatgtccctgctgggtttggtgtgtccgcctctgtttgagaccatc
gccgaactggaggactaccatcctcgaatcgccctgaagtggcagctgggacgcatcttc
gccctcttccttggaaacctctacaccttcctgttcgccctgtttgatgaggtcaacagt
aagctggacgaggaacagtccatcaagaacgcctccatctgggccatgaaggagtactac
gccaactactcacgtttgctcaacgattcggacgccactccgcctccgatgagcccggca
gacgtcatcagaggcccctgctgggagacggcagtcggcatagagtttgtgaaactgacc
gtctcagacatccaggtgacctacctgaccatcctgatcggcgacttcgcccgcgccgtc
atcgttcgtttcctcaactactgctggtgctgggacctggaagctggttttccgtcttac
ggagagtttgacatcagtggaaatgttctcggactggtcttcaaccaggggatgatctgg
atgggagcgttttacgccccagggctggtgggtatcaacgtgctccgcctcctcagctcc
atgtactaccagtgctgggccgtcatggccaccaacgtcccccatgagagagtcttcaag
gcctccaagtccaacaacttctacatggggctcctgctcctcatcctcttcctgagcctc
ctgcccgtcgtttacaccatcatgacgctgccgccgtcgtttgactgcggccccttcagc
gggcgggcgaagatgttcgatgtgatcatggagacgatcaggctggatctgccggccttc
atggggaccctgttcagctacgcagcgaaccccggactcatcatcccggccgtgctgctc
atggtgctggccatctattatctgaactcagtctccgaagcttaccaaaactcaaacatg
gagctgaagaagaagatgcagatggcccgtgacgaagagaagaaccggagaaataacaaa
gacagcaccaaccaggtcatgaaagacctggaggacctgctgcccaaccgatccctcagt
ccgccgccggagcctgaaaaaccaccagaaccagaagcgaaacccaccaaaacaaaacct
ggttctgctggaaaaggagtaaacttacagaaggatgtggctctggcgtcttccaaccca
aacgttcgagggccagtcgaccgggcaccaggaccgagaggacccgggccgggtccgggt
gctggacgtggccgaggccgtgggagaggagcccctcccagttaa
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