Xiphophorus maculatus (southern platyfish): 102227091
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Entry
102227091 CDS
T02923
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X4
KO
K15516
fragile X mental retardation protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102227091 (fxr1)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102227091 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
102227091 (fxr1)
mRNA cycle factors
Stress granule specific factors
102227091 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH_2
DUF7636
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
102227091
NCBI-ProteinID:
XP_014326573
Ensembl:
ENSXMAG00000000666
LinkDB
All DBs
Position
9:1404530..1422211
Genome browser
AA seq
675 aa
AA seq
DB search
MEELAVEVRGSNGAYYKGFVKDIHDDSLTIAFENNWQPERQVPFSDVRLPPPADAKKEIG
EGEEVEILSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNPNKA
VTKNSFHKCTVSVPQDLQEACQSENAHKDFKKAVGACRVSFCPESSELLIVSTNESTVKR
VSLLSDMHLRSLRTKLLLMSRNQEATKHLETSRQLVSSFQQEFTVRTDLMGLAIGSHGSN
IQQARKLPGVTAIELDEETGTFRIYGETEEAVKKARSFLEFVEDSVQVPRNLVGKVIGKN
GKVIQEMVDKSGVVRVRIEGDNDNKQPRQEGMVPFTFVGTKESIGNVQVLLEYHISYLNE
VEQLRLERMQIDEQLRQITQGHRPVDRERGERGERGGGGYNADNGANASSASLRGSRSYN
SRGRGRRGHSYNTGYGANSEHSNPSETDSERKDELSDWSLAGEDLDGERERGPRPQRDGR
RRPGPGRGRGRGRGRGAYGYNSGSRDHENNPPYGSLEANTETDQTADTDASESNLPANRR
RRSRRRRTDEDATLIDGMSESDNASVSENGIDLSEAKPQRRNRSRRRRMRLPEERQPVTV
ADYISRAESQSRQMTAKDTKKNKEVGQAEVIAEHSPQSAPATTNGSNDDVSDVTAPNVSA
YNRDSNPQPVMNGLS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggcggtggaggtccgtggctccaacggcgcttattacaagggttttgtc
aaagatatccacgatgactctctcaccattgcctttgagaacaactggcagccagaacgc
caggtgcccttcagcgacgtcaggttgcctccacctgcggatgccaagaaggagatcgga
gaaggagaagaggtggagattctctccagagccaacgaacaggagccttgtggctggtgg
ctggccaaagtccgcatgatgaagggagatttctatgtgatcgagtacgccgcttgtgac
gccacctacaacgagatcgtaacgttcgagcgtttgcggccggtcaaccctaacaaggcc
gttaccaagaactccttccacaagtgcactgtctccgttcctcaggatctacaggaagcg
tgccagagcgaaaacgcacacaaggatttcaagaaagcagtgggagcctgtcgagtctcg
ttctgcccagagagcagcgagctgctgatcgtgtccaccaatgagtcgacagtgaagcgc
gtgtctctgctgagcgacatgcacctgcgcagcctgagaaccaagctgctgctgatgtca
cgcaaccaggaggccacaaagcacctggagacctccaggcagctggtgtcgtccttccag
caggagttcaccgtgaggacggacctgatgggcctggccatcggcagccacggcagcaac
atccagcaagccaggaagctcccaggggtcaccgccatcgagttggacgaagagaccggg
accttcaggatttatggagagacggaggaagctgtaaagaaggccagaagcttcctggag
tttgtggaggattcagtccaggtgccaaggaatcttgttggcaaagtgattggtaagaat
gggaaggtgatccaggagatggtggataagtctggtgtggtccgggtccgaatagaagga
gacaacgacaacaagcaacccagacaggaaggaatggtcccctttacgtttgtcggtact
aaggagagtatcggcaacgttcaggtcctgttggagtatcacatctcctacctgaatgag
gttgagcagcttcgtctggagcggatgcagatcgatgagcagttgcgtcagatcacccaa
ggtcaccggccggtcgatcgggagcggggcgagcgaggagagagaggcggcgggggctat
aatgcagacaacggcgccaacgcgtcgtcggcctcgctgcgcggcagccgctcctacaac
agcagggggcgcggccggagaggccacagctacaacactggatacggcgccaattcggag
cattcaaatccctctgagacggattcagagcgtaaagacgagctcagtgattggtcgctg
gcaggagaggacctggacggggagagagagcgaggccctcgcccacagagagacggccgc
cggaggcctggacccggccggggccgaggaagaggcagaggaagaggagcatatggatac
aactctggctccagggatcacgagaacaatcccccctacggaagcctggaggcgaacacg
gagacggaccagacggccgacacggacgccagcgagtccaacctgcccgccaaccgccgc
cgtcgctcccggcgacgcaggacggacgaggacgccaccctgatagatggcatgagcgag
tccgacaacgcctccgtcagcgaaaatggaatagatttgtccgaagcaaaacctcagcgt
cgcaatcgcagccgccgccgccgcatgcgcctgcctgaggagaggcagccagtgactgtg
gccgactacatatccagggctgaatctcagagcagacagatgaccgccaaggataccaag
aaaaacaaggaagtgggtcaggcggaggtcattgctgagcacagcccacagtcggctccg
gcaaccaccaacggctccaacgacgacgtgtccgacgtcaccgccccgaacgtctccgcc
tacaacagggactcgaacccacaacccgtcatgaacggactctcctag
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integrated database retrieval system
