Xiphophorus maculatus (southern platyfish): 102227225
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Entry
102227225 CDS
T02923
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102227225
Membrane trafficking [BR:
xma04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
102227225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
SH3_2
TPR_MalT
TPR_1
SH3_1
SH3_9
TPR_NPHP3
SNAP
DIX
HEAT_Nup120
TPR_5
Motif
Other DBs
NCBI-GeneID:
102227225
NCBI-ProteinID:
XP_005795586
LinkDB
All DBs
Position
23:complement(22596513..22616743)
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AA seq
1607 aa
AA seq
DB search
MALISGSCRLLGQMASCCCRPFLNSSCCRPLIKVCLSSFTDISPAELDALWREPPYSLGG
TNEHFSDNNIMTQGEEEDGPTGDSGEGAEYDSYWKKKEAFLRGSKISVGEKFSSEIVLRF
TGRRRSGDNPDQYLQEALRTRLRVVESNSKDITQLFKDLSARLVSVHAEKDIFVLTFKTV
EEIWKFSTYLSLGFVARCLENFLCDQSFWLDAELLRELEINVTVDEEHLATLYLELLLQE
GSFFAKALFTRSEEDEDSEEQLAFKKNDLLIVRDTGKDDIWEGTMLATGNHGQVPVHAMQ
PLPYPFYQWFLRKYPGQAGYSPVEKELFESAIVTGSCEAIVDYSPAGPDELQLSQGDTVE
IQGLLIRGLSIFIGRHTSTGHTGFVHRAHVKPLNTKPLDRQLVFLTEEEKASLAQVNPYS
SEPSESCLLERLFSSDISSVYRLDRLNEADFMYIRNRPKHDFKGFSSARQSLMSERSEGR
QNQSSPRASVSVASPRVSLYHSLNPLPREGERLSFNLEDTFKELDEFQEDPPLFMEENSW
EGEKTELSDPTLTLLNHEHFQDEFLPLYDVHCSFLWMTFGEKTEDELSGHLESVRECAKR
LGMHWAHRRACFVLGRLCARKLKFSQARVYYEEALSVSVNSFSDVPLLVALFTNLTAIYL
KQRMTDKLPQILEKASALILCLPSHAFMSSDEVELLKLLLRRSVVLGDKHLEARVCYLIS
SLYLVLKKTEDTLPFFERLQFLSATLSTTEGGPIKPLDLNWLLSWLYHRKYMPYLALASL
SLDSREDHSLCDAFQRIELFIRNSVRLNPCWKEGTSLLPAQIVVYLQQALAVAEQGDDIK
MQRDLCLGLALTYQQYGALDKAVRCAQQAVETGSHINEEDGFEASVLLGWLLVLTGQAER
AQSILEPLLTSLQSTDSPTQQGVIHNLLALCLRHRGRVREAGWHLHSALEISRESGNQRN
QALALANLGCLALDAGANLLAERFLVRSLCLFLDLWESPTDEEHVQVYLWLGQSYKDRGK
SQDIRACYEMGLLIALHARNLHSQMVVAKLLSVLYAEMLLYRQSIVYYEHCVSVSRELKD
KRREGEYLEKLSSLYLSLNTEKSSRKSLDYTKQSLRISIDLGKREEESETWLQVGRIYYL
IQEDELADMYLQAAVKTALRMNDPHFALSIYEEAGDVYFKGHRNRMASEIFYRDGSLPFA
RSIKDVHSEFRLLSKLTELLMNQGEQEEALQYATLAVQIVNQTGVRENERTAYHRLATIY
YNLQQYEMAEYNYLKSLSLCPPTLQHPTEARYYTKVYCRLGNITLHDFKDAFDAVGYFYL
ALAAALEDKANPEALYVVYMKLAEIHGSHMPDAQLCQLYIDRAQSLKRVLAGVESVPDSD
SNLKRENLSNVYTGYRKSANDTHSTFDFVPEDERFVDSTAARAHSVKTDSGEILTDMNLE
GDYGQKDHSHCPGDTDSRYLDVSGSETDTIASQSYSDSVITGSFDTAKEHISDSSSTTDT
YQNPTEGKDSELDSDHSMPSQIPANPTGDLTRHTDARDTDSDVPDEQSTLSKETDALSDP
TQTDCDAGWKGTATMNNGKAASKDNAWRHMEKYTFCDAHSEHTDGDT
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgccggctcctgggccagatggcgtcttgttgctgcaga
ccgttcctcaactcgtcctgttgtcgcccgctcatcaaagtctgcctctcctccttcaca
gacatctcccctgctgagctggatgctctttggagggaaccgccatacagtctcggaggg
acaaatgaacacttctcagacaataacatcatgactcaaggtgaggaagaggatggtcct
actggcgactcaggagaaggagcagaatatgacagctactggaagaagaaagaggccttc
cttcgaggaagtaaaatttcagtcggggagaaattctcttcagaaatcgtgctccggttt
actgggcggaggcgttccggtgataatccagaccagtacctgcaggaggcgctgcgcaca
cgactccgagtggtggagagcaacagcaaagacatcactcagctctttaaagacctgtcg
gctcgtctggtctctgttcatgctgagaaggacatctttgtgctcacatttaagacggtg
gaggagatctggaagttttcaacttacctgtcattaggttttgttgcccgatgcttggag
aacttcttgtgtgaccagtctttctggctggacgcggagctgcttcgtgagttagagatc
aatgtcactgtggacgaagagcatctcgccaccctctacttagagcttctgcttcaagaa
ggatctttttttgccaaggcgctgttcaccagaagtgaggaggatgaagacagtgaggag
cagctggcatttaaaaagaatgacctgctgatagtgagggatacggggaaggacgacatt
tgggagggcactatgctcgccacggggaaccacggccaggtaccagtccacgccatgcag
ccactgccctaccccttctaccagtggttcctcaggaagtatccgggccaagctggatac
tcaccagtagaaaaggaactgtttgaaagtgcaattgtgaccggttcgtgtgaagccatc
gttgactacagtcccgctgggcctgatgagctccagctgagtcaaggggacacggtggag
atccagggtctgctgatacggggcctttccatcttcataggaagacacacatccacagga
cacactggatttgttcacagggcccacgtcaagcctctaaacaccaaacccctagacaga
caattggtctttctcacagaggaggagaaggccagcctggctcaggttaacccgtatagc
tcagagccaagcgaaagctgccttctggaaagactcttctcatcagacatcagctctgtg
tacagactagacaggctgaacgaggccgacttcatgtacatacggaatcggccaaagcat
gatttcaagggtttttccagcgcccgtcagagccttatgtccgaaagaagcgaaggaagg
cagaaccaatcctccccccgcgcctctgtctctgtcgcctcaccacgcgtgtccctctac
cattccctcaatcctcttccacgagagggagagcggctctctttcaatctggaggacaca
tttaaagagctagatgagtttcaggaggatccccctctcttcatggaagagaacagctgg
gagggggagaagacggagctcagtgacccgacactgactctgttaaaccacgaacacttc
caggatgaatttctgcccttgtacgacgtacactgttccttcctgtggatgactttcggt
gagaagactgaggacgaactgtccggacatcttgagagtgtcagggagtgcgccaagaga
ctgggcatgcactgggcacatcggcgtgcgtgctttgtccttggcagactttgcgccaga
aaactaaagttctcccaggcacgagtatactacgaggaagctctgagtgtcagcgtcaac
agcttctctgatgtaccgcttctcgtggctctcttcacaaacctcactgccatctacctg
aagcagcgtatgactgataaactgccccagatcctggagaaggccagtgccttgatactc
tgtcttcccagccatgctttcatgtcctcagatgaagttgaactgctgaagctcctcctg
agaagatccgtcgtgttgggggacaaacatttggaggctcgcgtctgctacctcatctct
agcctctacttagttcttaagaagacagaagacacgctacctttctttgagcgacttcag
tttctttcagcaacactatcgaccaccgaaggcggacctatcaaacctttggacctcaac
tggctcttgagctggctctatcatcgtaaatacatgccttacttagcactggcctcccta
agcctggactcaagagaagaccattcactttgtgatgctttccagaggattgagttgttt
atcaggaactctgtccgtctgaatccgtgctggaaggaaggaacctcactactccccgct
cagatagtggtttacctgcagcaggctcttgccgtagctgagcagggtgatgacataaag
atgcagcgggacctttgtttgggtttggctttgacctaccagcagtacggtgcgctggat
aaagcagtacgctgcgcacaacaagctgtggagacaggaagccatatcaatgaggaggat
ggctttgaggcttcagtgctacttggttggctgctggtgttgacgggtcaggctgagagg
gctcagagtattttagagccactgctcacatcactacagagcacagacagtcccactcag
caaggagtcatccataaccttttagcattgtgtctgaggcatcggggtcgggtccgagag
gcaggttggcatcttcactctgccttggaaatctccagagagagtggcaaccaaaggaat
caggcgctggcactggctaacctgggctgcctggcgctggatgctggggcgaacctcctt
gcggagcgctttctggttaggtctctgtgtctttttctggatctctgggagagtccaacc
gatgaggaacacgttcaggtgtatctgtggcttgggcagagttacaaggacagagggaag
agtcaggacatcagggcatgctatgaaatggggctgctaattgcactgcatgccagaaat
ttgcacagtcagatggtggtcgccaagcttctgagtgtgctgtacgccgaaatgctgctc
taccgtcagagcattgtttactatgagcattgtgtctcagtgtccagagagctaaaggac
aagagacgggagggagagtatctggaaaaactcagcagcctctacctctcactcaacaca
gaaaaatcgtctcgtaagtctcttgattacaccaagcagagtctgaggatttctatcgat
ctgggcaagagagaggaagagtcagagacctggctgcaggtgggacgaatctattacctc
atccaggaggacgagctggctgacatgtacctgcaggcagcagtgaagacagccctgagg
atgaacgaccctcactttgctttgagcatctacgaggaggcgggagatgtttactttaaa
ggccacaggaaccgaatggcttcagagattttctacagagacggtagtctaccatttgca
cggagcatcaaagacgtccattcagagttccgcttgttaagtaaattaacagagctacta
atgaatcaaggagagcaggaggaagctctgcagtatgcaacactggctgttcaaatagtg
aaccaaacaggagttcgtgaaaatgagaggactgcatatcatcgattggccacaatttac
tacaatcttcagcagtacgagatggcagaatacaattacttgaagtccctttccctgtgt
ccgcctacactgcagcaccccacagaggcgcgctattacactaaagtctactgcaggcta
ggaaacattacactacatgatttcaaggatgcttttgatgcagtggggtacttctattta
gcactggcagccgctcttgaggacaaagctaaccctgaagctctgtatgtggtgtacatg
aagctggcggagatccatggaagccacatgcctgatgctcagttgtgccagctgtacata
gacagagctcagagtctgaagagagtcctggccggagttgaaagcgtcccagacagtgat
tccaacctaaaaagggagaatttatcgaatgtctatactggatatagaaaaagtgcgaat
gacacgcattctacctttgattttgtacctgaagacgaaaggtttgtagatagtacagcg
gcaagagctcattcggtcaagactgactctggggaaatattgacggacatgaatcttgag
ggagattatggtcagaaggatcacagtcactgtcctggtgacacagacagtcgctattta
gatgtttcaggctctgagacagacaccattgcgagtcagtcatatagcgacagcgtcata
acaggatcctttgacacggctaaggagcacatttcagactccagcagcaccactgacact
taccagaatccgactgaagggaaggattcagaattggattctgaccacagcatgcctagt
caaatacctgcaaatcctacaggtgatctcaccagacacacagatgccagagacacggat
tcagatgttccagatgaacaaagcaccctgagtaaagaaacggatgctctcagcgatccg
actcagacagactgtgacgctggatggaagggtactgccaccatgaacaatggtaaagct
gcaagtaaggataatgcttggagacacatggagaaatatacattttgtgacgcacacagt
gagcacacagatggtgacacatag
DBGET
integrated database retrieval system
